Leucoraja erinaceus (little skate): 129711017
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Entry
129711017 CDS
T09122
Symbol
fbn2b
Name
(RefSeq) LOW QUALITY PROTEIN: fibrillin-2b
KO
K23342
fibrillin 2/3
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
129711017 (fbn2b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
leri00536
]
129711017 (fbn2b)
Glycosaminoglycan binding proteins [BR:
leri00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
129711017 (fbn2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
EGF
TB
FXa_inhibition
hEGF
EGF_3
Plasmod_Pvs28
Fibrillin_U_N
EGF_FBN_1st
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
129711017
NCBI-ProteinID:
XP_055514340
LinkDB
All DBs
Position
29:3952303..4154855
Genome browser
AA seq
2894 aa
AA seq
DB search
MGPRWIGKLVLGCAALACLATEAAKGQQEGDFRAARFAAVADRDSQSRVRRRGQDNLRGP
NVCGSRFHSYCCPGWKTLPGGNQCIVPICRNTCGDGFCSRPNICTCSNGQLSPGCGSGSV
QQCNVRCMNGGSCADDSCLCQKGFTGTHCGQPVCKNGCQNGGRCIGPSRCACVYGFTGPQ
CERDYRTGPCFTQVNNQMCQGQLSGIVCTKTLCCATIGRAWGHPCEICPAQPHPCRRGFI
PNIRSGACQDVDECQAIPGLCQGGNCINTVGSYECKCPAGHKQSDHSQKCEDIDECSTIS
GVCDGGECSNTAGSYVCTCPRGYSTSLDGSRCIDQRSGTCFSSLLGGRCAGDLHGHYTKM
QCCCDSGRCWAAGHTPEMCPVRGSDEYRRLCIEGLPFGPGYPGIGFPGFPGGIGSNGLGP
GGIGPGGFNYGGVDSGGIRPGGVRPDGIGPGGIGPGFTGLPGTGPGIGTATLNQTTDVCK
HYTNLCLNGRCIPTPSSYRCECNMGFKQDVRGECIDVDECFSSPCVNSDCFNTPGAYYCK
CHEGFQSTATKQACIDIDECIQNGVLCRNGRCVNTDGSFQCICNAGFELTPDGKNCMDHD
ECATTNMCLNGMCINEDGSFKCICKNGFVLAPNGRYCVDIDECHTPGICMNGRCINSEGS
FRCDCPPGLAIGVDGRVCVDTHMRSTCYGAIKKGTCARPFPGAVTKSECCCASPDHGFGE
PCQPCPAKTSAEFQALCSSGIGITADGRDINECALDPDICANGVCENLRSSYRCICNIGY
QSDISGKNCVDIDECSVNMLLCDNGLCRNTPGSYTCTCPTGYIFKPDTETCEDVNECESS
PCVNGYCRNMAGSFICECSLGSKLDPTRTICIDSMKGTCWLNIQGGRCEVNINGATLKSE
CCATLGAAWGSPCEHCELDASCPRGFARVKGVSCEDVNECDVFPGVCTNGRCVNTQGSFQ
CDCPQGLTLDGTGRTCVDVRLEHCYLKWEEDECTEPVGGRFRIDACCCSIGNAWGADCEE
CPQPGTPEYQATCPRGPGFANRGDVLTGRPFYKDINECKVFSSLCTYGTCRNTIGSFKCR
CENGFALNMEERNCTDINECRISPDLCGQGACVNTPGSFECECFDGYESGFMMMKNCMDI
DECERDPLLCRGGTCVNTDGSYECICPPGHELTPEGDGCVDIDECSLSDNLCKNGRCVNM
IGTYQCACDSGYQATSDRLGCVDIDECTIMNGGCDTHCTNSEGSYECSCGEGYALMPDKR
TCADIDECEENPDICDGGQCTNIPGEYRCLCYDGFMASMDMRTCLDVNECDLNPNICLHG
DCENTKGSFICHCQLGYFVKKGTTGCTDIDECEIGAHNCDVHASCVNVPGSFKCKCRDGW
IGDGLECIDLDECATEEHQCNPSANCMNTPGSYRCACKDGFSGDGFSCSDVDECAENVNL
CENGQCLNAPGGYRCECEMGFTPTDDSKACQDIDECTFQNICVFGTCQNLPGMFRCVCDD
GYELDRSGGNCTDINECADPVNCINGLCVNTPGSYLCNCPTDFELNPTGVGCVDTRVGNC
YLETLPRGDGGISCSAEIGVGVTRASCCCSLGRAWGNPCEFCPPVNSTEYKTLCPGGEGF
RPNPITVILEDIDECQELPGLCQGGNCVNTFGSFQCECPAGYYLNEDTRICEDIDECTTH
IGICGPGTCYNTLGNYTCVCPPEYMQVNGGNNCMDMRKSVCYRNFNDTCENELSFNMTKK
MCCCSYNVGKGWNKPCEPCPTPATSQYQLLCGNQAPGFIIDIHTGKPVDIDECREIPGIC
ANGVCINQIGNFRCECPMGFSYNNVFLICEDIDECTNGDNLCQRNADCINIPGSYRCECS
PGFKLSPSGACVDRNECQEIPNACSHGECIDTEGSYRCLCHNGFKATADLTMCMDIDECD
RQPCGNGTCKNTVGSYNCLCFPGFDLTHNNDCMDIDECSTLVGQVCRNGQCINSIGSFQC
LCQDGYDLPPDGKNCVDINECISYPGTCAPGTCQNLDGSFRCICPPGYEVQNDHCIDINE
CEEDPNICLFGFCTNTPGSFQCNCAHGFVLSENGRRCFDTRQSFCFTRFDNGKCSVPKAF
NTTKARCCCSKMPGEGWGDPCELCPQQEEVAFQELCPYGHGAIPGIGDTREDVNECVENP
GICINGHCINTMDGSFRCECPLGYNLDFTGVNCVDIVECSIGNPCGNGTCINVIGAFECE
CDDGFEPGPMATCEDINECSLNPLLCAFRCINNYGAYECTCPGGYTLREDRKMCRDLDEC
FEGLHDCETQGMLCKNLIGTFMCICPPGMMRRPDGEGCMDENECRTKPGICKNGRCINTV
GSYRCDCNEGFLENPSVTECLDNRQGFCFVEVLQTMCQMSSTNRNLVTKSECCCNGGRGW
GNQCELCPLPGTTQYRKMCPHGPGYATDGRDIDECRVMPNLCKNGQCINTMGSFRCFCEI
GYTTDLTATACIDLDECVQSPKPCNFICKNSEGSYQCSCPRGYILQEDGKTCRDLDECST
KQHNCQFLCVNTIGSFACKCPPGFTQHHTSCIDNNECMSQSPICGSKGTCQNTPGSFSCD
CQKGFLLDGTGFNCEDVDECDGNHRCQHGCQNMLGGYRCSCPQGYMQHYQWNQCVDENEC
SNPTACGAASCYNTLGSYKCLCPSGFDFDQYGGGCQDVNECSASGNPCSYGCSNTDGGYL
CGCPGGYYRAGQGHCITGMGFGNGQYLPEEEEEVAEENVLSPETCYECKINGYPKRGRHR
RSANGTGSHENHKISLASLDIDAPIPLNVNISNLGIHDHIMEFLPAIEPLENHVRYMISG
GNRASFFRIHQKNGLSYLHLSHKKPARGKYTLEISSLPLYRKKELLKLEDENDVDYLVGD
LGEALRMKLQIHLL
NT seq
8685 nt
NT seq
+upstream
nt +downstream
nt
atggggccacggtggataggcaagttggtgctgggatgtgcggctctcgcctgccttgcc
actgaagcggcgaagggccagcaagagggcgacttcagggcggcaagattcgccgctgtc
gccgacagagactcacagtcgcgggtcaggagacgaggccaagacaacttgagagggccc
aatgtgtgtggatctcgatttcattcctactgttgtcccggatggaaaacattgcccggc
ggcaaccagtgtattgtgcccatttgtcggaacacttgcggcgatggtttctgctccaga
ccaaatatatgcacgtgctccaacggccagctgtcgcccggttgcggatctggctccgtt
caacagtgcaacgtcagatgtatgaacggtggctcctgcgcggacgacagctgtctttgc
cagaagggattcacgggaacacactgcgggcagcccgtgtgtaaaaatggctgccagaac
ggaggacgctgcattggacccagtcgctgtgcgtgcgtgtacgggttcacggggccacag
tgtgagcgagattaccgaacgggaccatgcttcacgcaggtcaacaaccagatgtgccaa
gggcaactgagcggcattgtgtgcaccaaaaccctgtgttgtgccaccattggccgcgcc
tggggtcacccgtgcgagatatgtccagcacagccccatccttgtcgccgagggttcatc
cccaatatccgcagcggggcttgtcaagatgtggatgaatgtcaggcaatcccgggcctg
tgccaaggaggaaactgcatcaacaccgtgggatcctacgaatgtaaatgccccgctggg
cacaaacagagtgatcattcccagaagtgtgaagatattgatgagtgcagcacaatctcg
ggggtgtgtgacggtggagagtgttcgaataccgcagggagctacgtctgcacctgtcca
cgtggctacagcaccagcctggatggctccaggtgtattgaccagcgatctggcacctgc
ttctccagcctgctgggcggtcggtgtgcaggagacctgcatgggcattacaccaagatg
cagtgttgctgcgactctgggcgctgctgggcggccggccataccccagagatgtgtcct
gtcagaggctctgatgaatatcgcagactttgcatcgagggccttcccttcggacctgga
taccctggcatcggatttccaggattccccggtggaattggatccaacggccttggtccc
ggtgggattgggcctggtggtttcaactatggtggagttgactctggtgggattagacct
ggcggggtcaggcctgatggcatcggcccgggtgggattgggccaggtttcactggcctt
cccgggactgggcctgggattggtacggccaccttgaaccagaccacggacgtgtgtaaa
cactacaccaacctgtgcctgaacggacgctgcatcccgacaccatccagctaccgctgc
gaatgtaacatgggattcaagcaggacgtgcgtggggaatgtatcgatgtcgatgaatgc
ttcagcagtccatgtgtgaacagtgactgctttaatacccccggggcctattactgcaag
tgccacgagggtttccagagcactgctaccaagcaggcctgcattgacatagatgagtgc
atccagaatggggttctatgtcggaacggccgatgtgtcaatactgatggcagcttccaa
tgcatctgcaatgccggctttgaactcaccccagatggaaagaactgcatggatcacgac
gaatgtgccacaaccaacatgtgtctcaatgggatgtgcatcaacgaagatggcagcttc
aagtgtatctgcaagaatggctttgtcctcgctccaaatggacgctactgtgtggatatc
gatgaatgccacacgcccggtatatgcatgaatgggcgctgcattaactcagaaggttcc
ttcaggtgcgactgtcctccaggcctggccattggggtcgatggacgagtgtgtgtcgat
acgcacatgcgcagcacgtgctacggagccatcaagaagggtacctgcgcccggcccttc
cccggagcagtgaccaagtcagagtgctgctgtgccagcccggaccatggcttcggggag
ccgtgccagccctgcccggccaagacctccgctgaattccaggctctctgtagcagcggg
atcgggatcacagctgatggacgagatatcaacgagtgcgctcttgaccccgacatctgc
gccaacggggtttgtgaaaacctgcgcagcagttatcgctgcatctgcaacatcggctac
cagtcggacatcagtggcaagaactgtgtcgatattgatgagtgttcggtcaacatgctg
ctgtgtgacaatggactgtgccgtaacacgcccggcagctacacctgcacctgcccgacc
ggctacatcttcaaacccgacacggaaacctgtgaagatgtgaacgagtgtgaatccagc
ccatgtgtgaatggttactgcaggaacatggccggctcgttcatctgtgaatgctcgctg
ggcagcaagctggacccaaccagaaccatctgtatcgacagcatgaaggggacgtgttgg
ctgaacattcagggcgggcgctgcgaagtgaatatcaacggagccactctgaagtcggag
tgctgtgccacgctgggagcggcgtgggggagcccctgtgaacactgcgagctggatgct
tcctgccccagaggctttgccagagtgaagggagtcagctgtgaagatgtgaacgagtgt
gacgtattcccgggcgtttgcacgaacgggcgctgtgtgaacacacagggctccttccag
tgcgactgtccacaagggctgactctggatggaactgggagaacatgcgttgatgtccgt
ctagaacactgctacctgaagtgggaggaggacgagtgtacggagccggtgggtggccgt
ttccgcatcgacgcctgctgctgctccatcggtaacgcctggggcgcggactgcgaggag
tgcccacaacccggcacgcccgagtaccaggccacttgcccgcggggaccagggttcgcc
aacaggggcgatgtcttgacggggaggccgttctacaaagatatcaatgaatgcaaagtc
ttctccagtctctgcacatacggaacctgtcgcaatacgattggcagctttaagtgtcgc
tgcgagaatggctttgccctgaacatggaggagagaaattgcacggatatcaacgagtgt
cgtatttccccggatctgtgcgggcagggagcttgcgtgaacacgccgggcagctttgaa
tgcgagtgctttgacggatacgagagcggcttcatgatgatgaagaactgcatggacatc
gatgagtgtgagagggaccccttgctgtgtcggggcggaacctgcgtgaacactgacggc
agctacgagtgcatctgccccccgggtcatgagctgactcccgagggtgatggttgcgta
gatatcgacgagtgctcgctgagcgacaacctgtgtaagaacggccgctgtgtgaacatg
attgggacctaccagtgtgcctgtgattctggttaccaagcaaccagcgacagactgggc
tgtgtggatattgatgaatgtaccatcatgaatgggggctgtgacacgcactgcacaaac
tcggaaggaagctacgaatgcagctgtggtgaaggttacgccctgatgcctgacaagagg
acatgtgcagatattgatgaatgtgaggagaatcctgatatttgtgatggcggacagtgt
accaacatccccggagaatatcgctgcctctgctacgatggcttcatggcttccatggac
atgaggacctgtctggatgtcaacgagtgtgatctgaatccaaacatctgtctccatggc
gattgtgagaacaccaaaggctctttcatctgccattgccagctgggatactttgtgaag
aagggaaccacaggatgtacagatatcgacgagtgcgagattggagctcacaactgcgac
gtccacgcctcttgtgtgaatgtgccggggagcttcaagtgcaagtgccgcgacggctgg
attggagatggtctcgagtgcatcgatctggacgaatgcgcgactgaggagcaccagtgc
aaccccagtgccaactgcatgaacacgccgggctcataccgctgcgcttgcaaggatggc
ttcagcggagatggcttcagctgctcagatgtcgacgagtgcgcagagaatgtgaacctg
tgtgagaacgggcagtgcctgaacgctcctggggggtaccggtgcgaatgtgaaatgggg
ttcactccgacagacgacagcaaggcgtgccaagatattgatgaatgcaccttccagaac
atttgtgttttcggcacttgccagaacctgcccggaatgttccgctgcgtctgtgacgat
gggtacgagctggacaggagtggcggcaattgtacagatatcaatgaatgcgcggatcct
gtgaactgcatcaacggcctctgtgtgaacacccccggcagctacctgtgtaactgcccc
acggatttcgagttgaaccctaccggggttggttgtgtggacactcgcgtgggtaactgc
tatctggagacgttgccaaggggcgacgggggcatttcgtgcagtgcagagatcggcgtt
ggagtgactcgagcctcatgctgctgctcgctgggaagagcgtggggcaacccctgcgaa
ttctgcccccctgtcaattcaaccgagtacaagacactttgtcccggaggagagggtttc
agaccaaaccccatcaccgttatcttagaggatattgatgagtgtcaggaactgcctggt
ctgtgccaaggtggaaattgtgtcaatacatttggaagtttccagtgcgagtgcccagct
ggttactacctgaacgaggatacgcgcatctgtgaagatatcgatgagtgcaccacccac
attggaatctgcgggccaggaacatgctacaataccctgggcaactacacctgcgtctgc
cctccagagtacatgcaggtcaatgggggaaacaactgcatggatatgaggaagagcgtc
tgctaccgtaacttcaacgacacgtgcgagaacgagctgtcgttcaacatgaccaagaag
atgtgctgctgctcgtacaacgtgggcaaaggctggaacaagccgtgcgaaccctgccca
acgccagccacatctcaataccagctcctgtgtgggaaccaggccccaggcttcatcatt
gacattcacacaggcaagcccgttgatattgacgagtgtcgggaaatccccggcatttgt
gcgaacggcgtgtgcattaaccagatcgggaacttccgctgcgaatgtccgatgggattc
agctacaataacgtgttcctgatctgtgaagatatcgacgagtgcacgaacggtgataac
ctgtgccagaggaacgcagactgcatcaacatccccggcagctaccgctgcgaatgctcc
ccagggtttaaactctcacctagtggagcgtgtgtggatcgtaacgaatgccaggagatc
ccgaacgcctgcagccatggagaatgtatcgacacggagggaagttaccgctgtctgtgc
cacaatggattcaaagccacagcagacctgaccatgtgcatggatatcgatgagtgcgat
cgacagccctgtggcaacgggacctgcaagaacacggtgggctcctacaactgcctctgc
ttccctggattcgacctcactcacaacaatgactgcatggatatcgatgagtgctcaact
ctggtcggccaggtgtgtagaaatggacaatgcataaacagcattggatccttccagtgc
ctgtgccaggacggctatgacctaccgcccgatgggaagaactgtgttgatatcaacgaa
tgcatcagctaccctggcacttgtgcccctgggacctgccagaacttagacggttctttc
cgatgcatctgcccgcctggctacgaggtccagaatgaccactgcattgacattaacgag
tgtgaggaggaccccaacatctgcctgtttggtttctgcaccaatacgcctggaagcttc
cagtgcaactgcgcccacggctttgtgctctccgagaatggaaggagatgcttcgatacc
aggcagagcttctgcttcaccaggtttgacaacggcaagtgttccgtacccaaggccttc
aacacaaccaaagcccgctgctgctgcagtaagatgcccggggagggctggggtgacccc
tgtgaactctgccctcagcaggaagaagttgctttccaggagctgtgcccatatggtcac
ggtgccatcccaggcattggggacacccgtgaagatgtgaatgagtgcgtggaaaaccct
gggatctgcattaacggacattgcatcaacacaatggatggttccttccggtgcgaatgc
cccctggggtacaacttggatttcacgggagtcaactgcgttgatattgtcgagtgcagc
atcggtaatccttgtggcaatggtacctgcatcaatgttattggagcgtttgagtgcgaa
tgtgacgatggatttgaaccaggaccgatggcaacttgtgaggacattaacgaatgttcc
ctcaacccgctgctgtgtgcgttccgctgcatcaataactacggcgcctatgagtgcact
tgcccgggaggctacaccctgagggaggaccgcaagatgtgtagagatttggacgagtgt
ttcgagggattacacgactgtgagacccaaggaatgttatgcaagaatctcattggaacc
ttcatgtgtatctgcccgcctgggatgatgcggagaccagatggagagggctgcatggat
gaaaatgaatgccggaccaagccggggatctgcaagaacgggcggtgcattaacaccgtg
ggcagctaccggtgtgactgtaacgaagggtttttggaaaatccatcagtgacagagtgt
ctcgataatcgccagggcttctgtttcgtcgaagtgctgcagaccatgtgccagatgtcg
tccaccaaccgtaacctggtcaccaaatcggaatgttgctgtaacgggggcagggggtgg
gggaaccagtgtgagctgtgccctttgccgggaaccacccagtacaggaagatgtgcccg
cacggacctggctatgccacggatgggagagatatcgatgaatgtcgagtgatgccgaac
ttgtgcaagaatggacagtgcataaacactatgggctccttccgctgtttctgcgaaatt
ggatacaccactgatttaacggctaccgcctgcattgatctcgatgagtgcgtccaatca
cccaaaccatgcaacttcatctgcaagaactcggaaggaagctaccaatgctcgtgtcca
agaggctacatcctgcaagaagatggcaagacatgtcgagatctggatgaatgctccacc
aagcagcacaattgccagttcctctgtgtaaacaccatcggatcctttgcctgcaagtgc
ccgcctggattcacgcagcaccacacgtcgtgcatcgacaacaacgagtgcatgagtcag
tctccgatctgtggatcaaagggcacgtgccagaatacaccgggcagtttcagctgcgat
tgccagaaaggattcctattagacggcaccggcttcaactgtgaagatgtagatgaatgt
gacggcaaccaccgctgccaacacggctgccagaacatgctgggtggatacagatgcagc
tgcccgcaaggctacatgcagcactaccagtggaaccaatgtgtggatgagaacgagtgc
agcaatcccaccgcttgtggcgctgcctcgtgttacaacaccctgggcagttacaaatgc
ctctgcccatccggcttcgactttgaccagtacggtgggggatgtcaggacgtgaacgag
tgctcagcctcgggaaacccctgctcttatggctgctccaacacagacggtggctacctc
tgtggttgcccaggcggctactaccgagcgggacaaggacactgtataactggaatgggc
ttcgggaacggccagtatctgcctgaggaggaggaggaggtggcggaggagaatgtgttg
tcgcccgagacctgttacgagtgtaagatcaacggctatcccaagcgaggcaggcacagg
aggagcgccaacggcactggatcccatgagaatcacaaaattagtctggcgagcttggac
atcgacgcaccgatcccgctgaatgtgaatatctccaacctgggaatccatgatcacatc
atggaattcctgcctgccatcgagcccctggaaaaccacgtgcgctacatgatctccggc
gggaacagggccagcttcttccggatacaccagaagaacggactcagttacctccatctg
agccacaaaaagccagcacgagggaagtacactctggagatttccagcctgcctctgtac
aggaagaaagaactcctgaaactggaagatgagaatgacgttgactacctcgtgggcgat
ctcggtgaggcccttcgaatgaaactccagatccatcttctctga
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integrated database retrieval system
