Leucoraja erinaceus (little skate): 129711032
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Entry
129711032 CDS
T09122
Symbol
med16
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 16
KO
K15159
mediator of RNA polymerase II transcription subunit 16
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
leri03021
]
129711032 (med16)
Transcription machinery [BR:
leri03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Tail
129711032 (med16)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med16_bridge
Med16_N
Med16_C
WD40
WD40_WDHD1_1st
Beta-prop_IFT140_1st
ANAPC4_WD40
WD40_CDC20-Fz
Beta-prop_WDR35_TULP_N
WD40_Prp19
Beta-prop_HPS5
Beta-prop_EML_2
Motif
Other DBs
NCBI-GeneID:
129711032
NCBI-ProteinID:
XP_055514357
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Position
29:complement(4614824..4639948)
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AA seq
829 aa
AA seq
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MDVAYVCEWDKQPKSNYCPSVSLVCAWSCRNLVAFTTDLKNEEEQDLTYMIHILDTDHPW
DVYSINSGHHEVIASLEWDQSGSRLLSADADGQVKCWSMTDHLVNSWDSIVGSSVDGDPI
VALSWLHNGVKLALHVEKSGASNFGEKFSRVKFSPSLTLFGGKPMEGWIAVTISGLVTVS
LLKPSGQVLTATESLSRLRSRVALADIAFTGGGNIVVTTSDGSSSSPVQFYKVCVSVVNE
KCKIDTELLPSLFMRCTTDTARKEKYPAVTHLKFLTRETSEQVLLCASSLSGSIVECWSL
RKEGLPVNNIFQPISPMGDKQPSILKWRILSATNDLDRVTAVGLPKLPISLTSSDLKVAT
DTKFFPGMGLALAFHDGTIHIVHRLSLQTLGVFYSIPSQRPADDQSIKRQRTTASSVHFK
ALQLSLTSLALVGIDSQGKLSMLRISPSMGHTLDINTSLRHLLFLLEYCMVTGFDWWDIL
LHVQPNMVQNLVEKLHEEYTRQAQALQQVLSTRIVAMKASLCKLSTNTLARACDFHAKLL
LIAIGSTLKSLLRPHLLNTPDKSPGERLTEICCKNTDTDIDKVMINLKTEEFVLDAWVLQ
SLQQLIQWVGDFVLYLLASLPNQGSPVRPGFSFLRDGTSLGMLRELMVVIRIWGLLKPGC
LPIYTATSDTQDSMSLLFRLLTKLWLCCRDENHMTEPDDNLIDECCLLPSQLLVPSMDWL
PVNDGIIGKLQSKQPLKLQFGKPVSVPSHFATTQLDIFARSPGYQKMDNLRRLNLGVCPT
EETKSCTRCGCNTMLKSPNKSTAVKQWEQRWIKNCLCGGLWRKFPISLA
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atggacgtggcctacgtctgtgaatgggacaagcaacccaagagcaattactgcccctct
gtgtcactcgtgtgcgcctggtcctgcaggaacctagttgccttcaccaccgacctgaag
aacgaggaggagcaagaccttacttatatgattcacattttggacactgatcatccttgg
gatgtttattccatcaactctggacaccatgaagttattgcctctcttgaatgggaccaa
tctggttcccgactgttgtcggcagatgctgatggccaggtgaaatgttggagcatgact
gatcaccttgtaaatagctgggacagcatagttgggagctcagtggatggagatcctatt
gtagccttgtcgtggctgcacaatggtgtcaagttggccttgcatgtggaaaagtctgga
gcatccaattttggtgagaaattttcccgggtgaagttctccccgtcgttgacgctgttc
ggagggaagcccatggagggctggattgcagtaaccatcagtggtcttgtgactgtgtcg
ttattgaagcccagcggacaggttctcactgccacggaaagtttatcacggttgaggagc
agagttgccctggcagacattgcattcactggaggtggaaatattgtggtgaccacgtca
gatggcagcagctcgtcacctgttcagttttataaggtctgtgtgagcgttgttaatgag
aagtgcaaaattgatacggagcttctgccatcactcttcatgcgctgtacaacggacact
gctcggaaggagaaatacccagccgtcactcacctgaagtttttaacaagagaaacctcg
gagcaggtgttgctgtgtgcttccagtctgtcgggcagcatcgtagaatgctggtcatta
cggaaggaagggttgccagtaaacaatatttttcagccaatttcccccatgggtgataaa
cagccaagcatcctgaagtggaggattctaagtgcaaccaatgacctagatcgtgtaaca
gctgtgggtttacccaaacttcccatctctcttaccagtagtgatctaaaggtggcaaca
gacacaaaattctttccaggcatgggccttgcattagcattccatgatggaactattcac
attgttcacaggctttcactacaaacattgggagttttctacagcattccctcccaacga
ccagcagacgaccagtctattaagcgacagcgtacaactgcgtcgtcggtgcacttcaaa
gcactgcagctgtccttgacttcattggcattagttggaatagacagccagggaaagctg
agcatgctaaggatctctccttcaatgggtcacacgctagacataaacacatcactgcgt
catctgcttttcctattggagtactgtatggtgacgggtttcgactggtgggacatcctt
ttgcatgtacaacctaacatggtgcaaaacctagtggagaaactgcacgaggaatataca
cggcaggcacaggctttgcaacaggttctgtccacccgaatagtggccatgaaagcatct
ttatgtaagctgtcaacaaatacgctggcaagagcctgtgatttccatgcaaagctgctg
ctgattgcaataggttccacacttaaatcacttcttcgaccacatttgttgaacacacca
gataaaagccctggagagcgactgactgagatctgctgtaaaaacacggacactgatatt
gataaagttatgataaatttaaaaaccgaagagtttgttctggatgcctgggtgttgcag
tccctgcagcagctcattcagtgggttggagactttgtgctgtatctgctggctagtctg
cccaaccagggttctcctgttcgtccaggatttagttttctcagagatggaacctcactt
ggcatgctcagagaactaatggtggtgatacgaatttggggtctgcttaaacctggttgt
ttgccaatatacactgctacatcagacacccaggatagcatgtccctgcttttccgacta
ctcaccaaactctggctctgctgtagagatgagaaccatatgactgaacccgatgacaat
ctgatcgatgaatgttgtctgcttcccagccagctgctggttcccagcatggattggcta
ccagtgaatgatggaattattggcaagttacagagcaaacagccactaaagctacagttt
ggaaaaccagtcagcgtgcctagccactttgcaaccacgcagcttgatatctttgcaagg
tcacctgggtatcagaagatggacaatttaagacgacttaatttaggagtttgcccaaca
gaagaaaccaaatcctgcaccagatgcggatgcaacaccatgctgaaatcaccaaacaaa
tcgacagcggttaaacagtgggaacaaaggtggatcaagaactgtctgtgtggtggacta
tggcgtaaattccctattagtctcgcctga
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