Leucoraja erinaceus (little skate): 129711073
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Entry
129711073 CDS
T09122
Symbol
sin3b
Name
(RefSeq) paired amphipathic helix protein Sin3b isoform X1
KO
K23213
paired amphipathic helix protein Sin3b
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
leri03036
]
129711073 (sin3b)
Chromosome and associated proteins [BR:
leri03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
129711073 (sin3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
HHD_RTEL1
mTOR_dom
Hydrolase_2
Motif
Other DBs
NCBI-GeneID:
129711073
NCBI-ProteinID:
XP_055514421
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All DBs
Position
29:6410305..6464075
Genome browser
AA seq
1198 aa
AA seq
DB search
MSFCCQMPGVTQGLDLEPPPSQIHRRGGEIMAKIQAHLQQMNHQIQAQTFAVQKQAQQQQ
FQRLKCAFQVEDALSYLDQVKMQFGNNPAVYNEFLDIMKEFKSQSIDTPGVIDRVSRLFQ
GHPDLILGFNAFLPPGYRIEIQKNKAVSVHGPTPAETQVLSEAARERAAAAPTNAAAAPV
SRADSAPAQSPLLGHKDEHVDRRPIREDFTPRLLDHHDDITSNDPHPVEFDNAISYVNKI
KNRYLERPEVYKSFLEILHTYQKEQLIVKDTKGKPYCGMTEDEVFAKVANLFRGQEDLLT
EFGQFLPDAKRSLFTGSAASEKDENRMADDDDGSKHSQSKKRLRTSLLPQVLPPLKKKLK
LSSVKDRSLASAGKHGTLREFSFFDRVRRILKSQEVYENFLRCIALFNQEVVSGSELLQL
VTPFLGRKFPELFARFKSFLGQKELSLTQPLQRDRPVDGIAREIDYASCKRLGSSYRALP
KTYQQPKCTGRTAVCKEVLNDTWVSFPSWSEDSTFVSSKKTPYEEQLHRCEDERFELDVV
LETNLATIRVLESVQKKLTRMSPEDQEKYRLDNCLGGTSEVIHRRAIYRIYGDKAPEIID
GLKKNPGTAVPVVLKRLKAKEEEWREAQQGFNKIWREQYEKSYLKSLDHQGVNFKQNDTK
ALRSKSLLNEIESVYDERQEQNSEEGCPGFTGPHLMFVYEDKQIMEDAASLIIYHVKRQP
TIQKEDKDHIKRIIYHFVPDLFFSQRGELSESEDSTDEEMESDQRHSQRNSADTGQKGAT
SPESSLAEERVDLRDQVAEYQKNLDDVYNLFFVNNNWYFFLRLHQILCYRLLRIYRQAEK
QLLEYQVEKEKEKQLQEGRKEKASDPAVELRLKHQSEIELEEYYPAFLDMVRNLLDGNIE
PTQYEDTLREMFTIHAYIGFTVDKLIQNIVRQLQHLVSDDVCVQAAEVYLSERKRGAAGG
GLPTQCVRATLEATYQQKAERAMPDENCFKIMFIQSKGRVSMTIELLDTEEAPSDDPLEL
QNLTSYVEQYAGPEAAMQFEQTDGFFYKPVFLPRNLRKFRKWQQKQFLSMRNESRNSRQR
SLGVENSNSIDCKFKLNTHKLVYVMNSEDFMYRCGALHRARESQCQVVRYQHQQFQSWHN
RWLQSHVTDEAAELVQDWLMGEDDEDLILCKTVCETDTVHDIPVNRYRVQYSPCPPSP
NT seq
3597 nt
NT seq
+upstream
nt +downstream
nt
atgtccttttgctgccagatgcctggggtgacccaaggcttagacttggaacctccaccg
tcccagatacatcggcgcggaggggagatcatggccaagattcaggcccatcttcagcag
atgaaccatcaaatccaggctcagacctttgcagtgcagaaacaggcacagcaacaacag
ttccagaggctcaagtgtgcttttcaggttgaagatgccttgtcatacctggaccaggtt
aagatgcagttcgggaacaacccggccgtttacaatgagttccttgacatcatgaaggaa
tttaaatctcaaagcatcgacacacctggtgtaattgacagggtttcccggcttttccag
ggacatcccgaccttattctgggattcaatgccttcctgccaccgggatacagaatagag
attcagaagaacaaggcagtgagtgtccatggacccaccccggctgagactcaggtgctg
tcggaggcagcgcgtgagcgtgcagctgccgcgcccaccaatgctgccgccgctccggtc
tcccgtgccgactctgccccggcccagagccctctgctgggtcacaaggacgagcacgta
gaccgccgcccgatccgcgaggacttcactccacgtttactggatcaccacgacgacata
acatccaatgatccgcatcccgtggagttcgacaacgcaattagttacgtgaataaaatc
aaaaaccgttacctagaacgccctgaggtttacaaatcctttctggagattctgcacacc
tatcagaaggagcagctgattgtgaaggataccaaggggaaaccttactgtggcatgacg
gaggatgaagtcttcgcgaaggtcgccaatctgttccgaggccaggaagatctgctgact
gagtttggccagtttcttccagatgccaaacgatctctgttcactggaagcgctgcgtcg
gaaaaggatgagaatagaatggccgacgacgacgatggatcaaaacactcgcaaagcaag
aagcgtttgcggacctcgctgctgccccaagtgcttcctccactcaagaaaaagctgaag
ttatccagtgtgaaggatcggtcattagcctctgcgggcaagcacggcaccttgcgagag
ttcagcttcttcgacagagtgcgtcggattctgaagagtcaggaggtgtacgagaatttc
ttgcgctgcattgccctgttcaaccaggaggtggtgtcaggctctgagctgttgcagctg
gtcactccattcctgggcaggaagtttccggaactctttgcacgcttcaagtcgttcttg
ggccagaaggagctgtcactcacacagccgctgcagagggatcggccggtggatgggatc
gcccgggagatcgactatgcgtcgtgcaagagattgggctccagctaccgagctctgcct
aaaacctaccagcagcccaagtgcacggggcgtacagccgtctgcaaggaggttctcaat
gatacttgggtctcattcccctcttggtcagaagattccaccttcgtgagctccaagaag
accccatatgaggagcagcttcatcgctgtgaggatgagagatttgagctcgacgttgtc
ctggaaacaaaccttgccacgatccgtgtgctggagagcgtgcagaagaagctgacccga
atgtcgcccgaggatcaggagaaatatcgccttgataattgtttgggaggaacttcggaa
gtcatccatcgcagagctatctatcgcatctacggggacaaagctccggaaataatcgac
gggctcaagaaaaacccaggaacggctgtgcctgtggtgctgaagaggttgaaagccaaa
gaagaggaatggcgggaggcacagcagggcttcaacaagatctggcgggagcagtacgag
aaatcgtacttgaagtcactggatcaccagggagtcaacttcaagcagaacgacaccaag
gcactgcgctccaagagtctgctgaatgagattgaaagcgtttacgacgagcggcaagag
cagaactctgaggaaggttgcccgggcttcacggggccccacctgatgttcgtgtacgag
gataaacaaatcatggaggacgccgcgtccctcatcatctaccacgtgaagcggcagccc
accatccagaaggaggacaaggatcacatcaagcgtatcatctaccattttgtgccggac
ttattcttctcccagcgcggggagctgagcgagtcggaggactcgacggacgaggagatg
gagagcgaccagcgacacagccagcgcaacagcgcggacacggggcagaaaggagcgact
tccccggagagcagtctggccgaggagcgggtggacctgcgcgaccaggtggccgaatac
caaaagaacttggacgacgtctacaacctgttcttcgtgaacaacaactggtactttttc
ctgcggctccaccagatcctgtgctaccggctgctgcgcatttacaggcaagcggagaag
cagctgctggagtaccaggtggagaaggagaaggagaaacaactgcaggagggaaggaag
gagaaagcaagtgatcctgccgtcgagctccggctcaagcatcaaagtgagattgagttg
gaagagtattacccggcctttctggatatggtaaggaacctgctggatggaaacattgag
ccgacacagtacgaggacacgctgcgagagatgttcaccatccacgcctacattggcttc
actgtcgataaactgatccagaatatcgtgcggcagctacagcacctggtgagtgatgac
gtgtgtgtgcaggctgcagaggtgtacctgagcgagagaaagcgaggagctgctggtggg
ggtttgcccacccagtgtgtccgagccaccttggaagcaacctaccagcaaaaggcagag
cgagcgatgccagacgaaaactgttttaagattatgtttattcagagtaaggggcgtgtc
tccatgaccatcgagctactcgacacggaggaagcaccttcagacgatcctctggaactg
cagaatttaacaagttacgttgagcagtatgccggtccggaggcagccatgcagttcgag
cagacagatgggttcttttataagccagtgtttttacccagaaacctccgaaaatttcgt
aagtggcagcagaagcagtttctatccatgagaaatgaaagcaggaacagcaggcagcgc
agtctgggggttgagaactccaacagcatcgactgcaagtttaagctcaacactcacaag
ctggtgtatgtcatgaactctgaagacttcatgtaccgttgtggagctctgcaccgggct
cgcgagtctcagtgccaggtggtgcggtaccagcaccagcagttccagtcgtggcacaac
cgctggctgcagagccacgtgacggacgaggcggctgagctggtgcaggactggctgatg
ggcgaggacgacgaggacctgatcctgtgcaagaccgtgtgcgagaccgacaccgtccac
gacattcccgtcaacagataccgcgtgcagtacagcccgtgccccccctcgccgtga
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integrated database retrieval system
