Leucoraja erinaceus (little skate): 129711101
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Entry
129711101 CDS
T09122
Name
(RefSeq) rho guanine nucleotide exchange factor 18-like isoform X1
KO
K21066
A-kinase anchor protein 18
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
129711101
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
leri04131
]
129711101
Membrane trafficking [BR:
leri04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
129711101
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_16
RhoGEF
C1_1
PH
C1_2
SOS1_NGEF_PH
PH_13
Motif
Other DBs
NCBI-GeneID:
129711101
NCBI-ProteinID:
XP_055514471
LinkDB
All DBs
Position
29:complement(7363648..7508046)
Genome browser
AA seq
1429 aa
AA seq
DB search
MLPRLAAVAGPSRQAAATNDRSLGQEGGGCTPSRGHGEDEQNNASDTENAMDSEDLDSFP
LLIRSMSTSRRHSWEGPLSPSLPGDARRRLSLDLLGIDSDGEGDGEEEDQLETSQDASAY
DLVPSHIAGTNGREDTRQATGIQAGTSFTLPEQEMQRTEMRPRLNASTSYSSMGIQHRAS
RNMAAPQCRETESETSPENQEEKENLKPDHFARTSAGSVQMRPPASSHDLTWMEFLAEKE
DGDKTDRPEKGTKVKRTLSSLKNRVTGSFKDKGKTKEKEKESPKEKRKCNNGHELVPGTF
SSFTNCTLCSKALSSKTGYQCVNCAVNVHKNCRNLLAECSTSKSKLKDSQQKLTGNPQST
TQQASSAREQPPRCAQLVADGTPGGVRNIGMTIPPRRPSQPSSFSVNSVSKDGVTAGEME
QEVENGIPRGKPWTEETPSLVSSSAESLVAEDTIYASLKAELEVDGQEFEAESWSLAVDQ
AYAKKQTKEVIKRQDVIYELMQTEMHHVRTLKIMLHVYCRGMEEELQLSDQHTVNRIFPC
LRRLLEIHKTFFSRLKERRKSCLEEGSERNYLIQKIGDVLTQQFSGECGDEMKVQYGDFC
GQHHEAVTYYKLMYQQNKKFQNLIKKLSNYSVVRRLGVQECILLVTQRITKYPVLVERII
QNTEAGSEDHEELPKALVLIKDTITDVDDRVSLCEKARRWKEIVNRMDIKSTAKLKNGST
FHKMNMLRTKRKLLYEGVVCWKAASGRLKDILALLLTDVILLLQEKDQKYLFATVDQKPA
GISLHKLIVREVANEEKGMFLISASDEGPEMYEIHTNSKEERNTWMAVIRDAICRYPIEE
AANLGEQEEEWRQDEGRAARIKELQQHLSTKDDVLRRTLTEKLDIYNEIAEVNGYLDTGR
QCALLRSDTVESQRGDIVFTEVLKEVEKLQSFIACQPYNIHWQLEDSLGSSGLPRRAETF
GGYDSSSANLIKEGSIKKKSNTLSSSSELKEKSGSRASSDPQLQEYESGQMSDLAWWCSS
SNSSLMCDTELVQSVQRLTHLLYKLKVMIAQQDSYIEMQRSMGASWERDRQCRPAGPRGG
QLLEQEKQRNFEKQREERANVQKLQNQVRLEQQKWERDRDRQQRELDLQNARLLGSEDEL
QKQMKQLAQEKEELESQRRNYQQDLERLRESQRTVERERERLEQQQRKHLKQSSVVFSSE
AAQIPGFIHAHSLDGERAEMSLLPQSEPGLAQHGTKDLGQSSTLMEHSERAAEVHLQREN
SNTSMFTRTPDIRQSLITKPHVPIHLVSTTNESLKHTGVQQKIPTKLATLKGGKEKGGKA
KDRQSIAGMPSSSMLSSSGSVAADLRQNPTRFFGKDDGVLRSRRSSSPVIASIQVLSHQE
SVAPMDIQPEPQPMTVSAPMPSGMSQLQGTPVTAVTKQTDDSGNQIIFF
NT seq
4290 nt
NT seq
+upstream
nt +downstream
nt
atgttaccccgactagcagcagttgccgggccttcgcggcaagcggcggccacgaacgat
cgctcgctgggccaggagggcggcggatgcacgcccagccgcggacacggggaggatgag
cagaacaacgcgtccgacaccgagaatgcgatggacagcgaagatctggattcattccct
ttgctcatcaggtccatgtccacctccaggaggcacagctgggagggacctttatctccg
tcactgcctggagatgcaaggagaaggctcagcctcgatctgctggggatcgacagcgac
ggtgagggtgacggagaggaggaagatcagctggagacctcccaggacgcctccgcctac
gacttggtgccatcccacatcgccgggaccaacggcagagaggacaccaggcaggcgact
ggaattcaagcggggaccagcttcaccttgcctgagcaggagatgcagagaacagaaatg
aggcctcggctgaatgccagcacttcctattcctccatggggattcaacatcgcgcttcc
cggaacatggctgcaccccagtgtagagaaacagaatccgaaacgtccccagagaatcaa
gaggagaaagaaaatctgaagcctgaccactttgcaagaacatcggcgggatctgtacag
atgcgcccccctgcctcctcacacgatctcacttggatggaattccttgccgaaaaagag
gacggtgacaaaaccgatcgacccgagaaaggaacaaaagtgaaaagaacattaagttcc
ctcaagaacagggtgactggctccttcaaagataagggtaagaccaaagagaaagaaaag
gaaagtccaaaagaaaagagaaagtgtaacaatggccacgagttagtgcctggaaccttt
tccagcttcaccaactgcacactgtgcagcaaagcgctgagcagtaaaaccggttatcag
tgtgtgaactgtgctgtgaatgtacacaaaaactgcaggaaccttctagctgaatgcagt
acttccaagagcaagctaaaggactcccagcagaaacttacaggaaatccacagagcaca
acccaacaagcatcttcagcgagggagcaaccaccacggtgtgcacaactggttgcggat
ggcacgcccggtggagtgcggaatatcggcatgaccattccaccaagacgaccttcccaa
ccttcttcgtttagtgtcaacagcgtcagcaaagacggagtaactgcaggggagatggag
caggaggtggagaatggaatcccaagaggaaaaccatggactgaggaaactccaagcctg
gtttcatcatctgctgaatcgcttgtggcagaagacaccatttacgcttcactgaaggca
gagttggaggtagatggccaggagtttgaggctgaatcatggagtcttgcagtggaccag
gcttacgcaaagaaacagaccaaggaagtcatcaaaaggcaggatgttatatacgagctc
atgcaaacagagatgcatcatgtcagaacgctgaaaattatgctgcatgtatattgccgg
gggatggaggaggagcttcagttaagtgaccagcacactgtgaacagaatctttccctgc
ttgcgccggctacttgaaatccacaaaaccttcttctcccgcttgaaggaacggcggaaa
agttgcttggaagaagggagtgaacggaattacctcatccagaaaattggagatgtcctc
acacaacagttctcaggtgaatgtggagatgaaatgaaggtgcagtacggggacttctgt
ggccagcaccatgaggcggtgacctattacaaattgatgtaccagcagaacaagaagttt
cagaacctgatcaagaaattaagtaactattctgtggtgaggcgcctcggagtgcaggag
tgcattttactggtcactcagcgcattacaaaataccctgtcttagtggagagaattatt
cagaatactgaagctggctcagaggatcacgaagagctgccgaaggcattggtgctaata
aaggacacaataacagacgtggacgacagagtgagcttgtgtgagaaagctcggcgctgg
aaggagattgtcaataggatggatatcaagtcgacggccaagctgaagaatggaagcaca
ttccataaaatgaacatgctgcgaacaaagaggaaactcctgtacgaaggcgttgtgtgc
tggaaggctgcgtctgggcggctaaaagatattctggctctccttttaacagatgtgatt
ctgctacttcaagaaaaggaccagaagtatttgtttgctactgtggaccagaagccagct
ggcatctcgctgcacaagctgattgtcagggaagtggccaacgaggagaagggaatgttc
ctcatcagtgcttcagacgagggccccgagatgtacgaaatccacacaaattccaaggag
gagcgaaatacttggatggccgttattcgtgatgctatatgcaggtacccaattgaagag
gccgcaaaccttggtgagcaagaggaggaatggcgacaggatgagggacgagctgctcga
atcaaagaacttcaacagcatctgagcacgaaggacgatgtgctcaggaggaccctgacc
gagaagttggacatttacaatgaaatagcggaagtcaatggttacctggacacgggaagg
caatgtgcactgcttcgatctgacaccgtggagtcccagcggggagatattgtgttcacc
gaggtgttgaaagaagttgaaaagcttcagagctttattgcctgtcaaccctacaacata
cactggcagttagaagacagcctggggtcctcggggttgccacgcagagcagagactttt
ggaggctacgacagcagttcagctaatctaatcaaagagggctccatcaagaaaaagtcg
aacacgttgtcttccagcagtgagctgaaggagaaatctggatctcgggcaagttcggat
ccccagctgcaggagtatgagagtggacaaatgagtgatctagcttggtggtgtagcagt
agtaacagcagtttgatgtgtgatacagagctggtccagagtgtgcagagactgacacat
ctgctttacaagctgaaggtaatgattgcccagcaggacagctacattgagatgcagcgg
agtatgggtgcgagctgggagcgggacaggcagtgccgacccgcaggcccgcggggcggc
cagcttctggagcaagagaagcagcggaacttcgagaagcagcgcgaggagcgggcaaac
gttcagaagctgcagaaccaggtgcggctggagcagcagaagtgggagcgggaccgtgat
cggcagcagcgggagctggacctccagaacgcgcggctcctcggctccgaggacgagctc
cagaagcagatgaagcagctggctcaggagaaggaggagctggagtcccaacggcgcaat
taccagcaggatctggagcgtctgcgagagtcccagcgaacggtcgagagagagagggag
cgcctggaacagcaacagcgcaaacacctgaagcagagctcagtcgtgttttcatctgaa
gctgcacagattccaggcttcattcatgcccacagccttgatggagagagagctgaaatg
agcctcctaccgcagagcgagccaggactggcccagcatggcaccaaggacctggggcag
tcaagcacgttgatggagcactccgagcgagctgctgaagtccatcttcagagggagaac
agcaacacctccatgtttactcgcacgcctgatatccggcaatccctcattacgaaaccc
catgtgcccattcatctcgtgagcaccaccaatgaaagtctgaagcacactggagtacaa
cagaagatcccgactaaacttgccaccttaaaaggggggaaagagaagggtggaaaagcc
aaggaccgacaatccattgctggaatgccctcttcatcgatgctttcctcatcagggtca
gtcgctgcggacttgagacaaaacccgacaaggtttttcggaaaagatgatggggtgctg
agaagccggaggtcttcaagcccggtgatagcaagcatccaagttctctcccatcaagag
tctgtggctccgatggacatccagcccgagccgcagcccatgacagtgagcgctccaatg
ccaagtggaatgtcccagctccagggcacgcccgtcaccgccgtgacaaaacagacggac
gattctggcaaccagatcatcttcttctga
DBGET
integrated database retrieval system
