Leucoraja erinaceus (little skate): 129711128
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Entry
129711128 CDS
T09122
Symbol
rexo1
Name
(RefSeq) RNA exonuclease 1 homolog
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
129711128 (rexo1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
leri03009
]
129711128 (rexo1)
Ribosome biogenesis [BR:
leri03009
]
Eukaryotic type
Pre-60S particles
RNases
129711128 (rexo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EloA-BP1
Motif
Other DBs
NCBI-GeneID:
129711128
NCBI-ProteinID:
XP_055514525
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All DBs
Position
29:9452160..9515533
Genome browser
AA seq
1256 aa
AA seq
DB search
MLRSTEFFRSIECPFYGGISPSPPCTAGGGCNRPYCHFRHRSQKPREKPLGDDQPLAADR
EHGYDPYNPELPKGSSRNGEGISGDLTESSTLELELVNKAIEAVQNEVEREQKKLSKYED
LLDEKEEYVLSTSSTQKTVSKIKNYSKPLTNVDKLIDSLEYIPNNYHLNSNVEYTPTPLS
VSAYSSKYTLDTDDEGDARGNSLKYVPTLVTKPVKNATSVSGNKYVIDNTKPCTDLEYDP
LLNYSARLIKKRTKQHETKRPRRDGAEEPYIPTAKKRCHRLNLSSDDVDAEFSDSEDDQT
NDHQQSCDRQRSDILSLKAKDLNKQSVKRITIQCNVEDVCNIPSKQEVNRRKQKMKKNIR
SSKFSHCSKEELEERECKEKRDKQSDPDGSKVKARKDKMHSIKIKSSHCPQQVDKTSKVK
CAKESSEIKREKQGEKLKNSKNGDSTFVEKKHKGSEKNGVKEVKHKIKSDKSPTGKLDKT
NISKLNGVKIENQSKSRSTSLSDSSRKIKCHDGKIITSQKIDKNNDNIKSKALIRKNVTR
MDIKNKDKESKSLKDKAKHRERRLKPALTKRTLSRTDLFGDDSSNDDDTAKDGTAVNHES
DSDSDRNPHINSYSSEDETGDHSEGAFSSEDDINILSLEKDFEFESDPMEECLRIFNESK
EVKNEDKGRVSKLMVLESKEENESNLTTLFPGQKRRISHISKQENLEPAKPVIRPFRRFT
AQEVCYQRGLMAHQQAAQHAEVEKSVSVSFVKQGLKKRVAHMPKPETTSPDNQSPMKQNT
EPIKRTACPNSPRSSRIGLKPQTAIGMASKTVTTFAQKRIAHTPTLKSSLKRPTIPTEYG
SKVPTNVRQRYLNVFIDECLKFCTSEQMAFDKALSEESTVYQRSTSRTVYLNVAVNTLKK
LRSQSNGMPSPPKQAANVDTKKKMQSHEALLGGRLAMKTSFTLNRSGKQQDVELKGASLY
NRLSEYILTEDQLRENCYPRPHAEKPGVAVLYNQNEKKNILDPSLRICCRCGAEYAVSVS
GNCIRKEECNYHWGRMRRQKVPGGWETQYNCCAGAIGSPGCQTAKQHVQDGRKENLAGFM
KTFEKAMPPDENPGIFALDCEMCYTKQGLELSRLTVVNSDLKVMYDTFVKPDSKVVDYNT
RFSGVTEEDMASTTITIRDVQAVLLNMFSAATILMGHSLESDLFALKLMHSTVIDTAIVF
PHRLGLPYKRALRNLMADYLKRIIQDNVEGHDSSEDASACMELMIWRLKEDAKLRR
NT seq
3771 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgttccaccgagtttttccgcagcatcgagtgcccgttttacggtggcatctcc
ccctctcccccctgcaccgcgggcggaggctgtaaccggccctattgtcactttaggcac
cgcagccagaagccgagggagaagccgctgggcgacgaccagcctctagcagccgaccga
gaacatggatatgatccatataatccggaacttccgaagggttcatccagaaatggagaa
gggatctcgggtgaccttacagaatctagtactctagagttggaactggtcaacaaagcc
attgaggctgttcagaatgaggttgaacgagaacagaaaaaactgtcaaagtatgaggat
cttctcgatgaaaaagaagaatatgtcctttcaacgtcatctacacaaaagaccgtcagc
aaaatcaagaattactcaaaacctttaactaatgtagataaattgatagattctttagaa
tatattccaaataattaccacctaaatagtaatgtagaatacacccctactccactttct
gttagtgcctattccagtaagtacactttggatacagatgatgaaggtgatgcaagaggt
aattctttgaaatatgtcccaacgcttgtgacgaagccagtcaaaaatgctacttctgta
tccggtaataaatatgtgattgacaataccaagccatgcactgatttagagtatgaccct
ttgctgaattattcagcccgactgatcaaaaaaaggacaaagcaacatgagaccaaaagg
cccagaagagacggcgcggaagaaccgtatatacctacagcaaagaaacgttgccatcgt
ttgaacttaagcagcgatgatgtggatgcggaattctctgactctgaagatgatcaaact
aatgaccatcaacaaagttgtgacaggcaaaggtcagatatattgtctctgaaggcaaag
gacttgaacaagcagtctgtgaaaaggataacaattcagtgtaacgtagaagatgtttgc
aatattcctagcaaacaagaggtgaatagaaggaaacagaagatgaagaaaaacattcgt
tcgtctaaattttcacattgtagcaaggaagaacttgaagaacgagaatgtaaagagaaa
agggataaacaaagtgacccagatggttcaaaggtgaaggcaagaaaggacaaaatgcac
agtatcaaaattaaatcttcacactgcccacagcaagttgacaaaaccagtaaagtaaaa
tgtgcaaaagaaagttcagaaattaagcgagaaaaacaaggggagaaattaaaaaacagt
aagaatggggatagtacatttgttgaaaagaaacacaaagggtctgagaaaaatggggtc
aaagaagtaaagcataaaattaaatctgataaaagccctactggaaagttggataaaaca
aatattagcaaactgaatggggtaaaaattgaaaaccaatccaagtccagatcaaccagt
ttatcagatagttcaagaaaaatcaaatgtcatgatggcaaaatcataactagtcagaaa
attgacaaaaataatgacaacataaaatccaaagctttgatacgtaaaaatgtaactcgt
atggacattaaaaacaaagataaggagtcaaaatctctgaaagataaagcaaaacatcga
gaaagaagattgaaaccagccttaacaaagcgaacactcagtcgcacagacttatttggt
gatgatagtagtaacgacgacgacactgctaaagatggcacagctgtgaatcatgagtct
gattcagacagtgacagaaatccacatatcaacagctattccagtgaggatgaaactggg
gaccatagtgaaggggctttctcttctgaggatgatatcaacattctcagtctagaaaag
gattttgaatttgaatctgatcccatggaggaatgtctaaggatttttaatgaatctaaa
gaagtgaagaatgaagataagggcagagtttcaaaactgatggtactggaaagtaaagaa
gaaaatgaatctaatttaactacactattcccaggacagaaaagaagaatttcacacatt
tcaaagcaagaaaatctagaacctgccaaaccagttatccgtccttttcgtagatttact
gcccaagaggtttgttatcagcggggtctgatggcacatcaacaagctgcacagcatgca
gaagtagaaaaatcagtcagtgtatctttcgtcaaacaaggactgaagaagagagttgca
catatgccaaaaccagagacgacatcaccagataatcaatcccctatgaagcagaacaca
gagccaataaaaagaactgcatgtcctaacagcccaagaagcagcagaattggtttaaaa
cctcaaactgccattggcatggcatcaaaaactgtaacaacttttgcacagaagaggata
gctcatactccaactttaaagtcaagcttgaagagacccaccattcctacagaatatggg
tcaaaagttccaactaacgtgaggcaacggtatttgaatgtcttcatcgatgaatgcttg
aaattctgtacatccgaacaaatggcctttgacaaggctttgagtgaagaaagtacagtg
tatcagcgaagtaccagtagaacagtgtacctaaatgtggctgtaaacaccttaaagaag
ttgaggagccaaagcaatggcatgccatcacctccaaaacaagcagctaatgtagacaca
aaaaagaagatgcagtcacatgaagcattgcttgggggaaggttagccatgaaaacaagt
ttcactctgaatcgatctggaaagcagcaagatgttgaactcaagggtgcttcgctatac
aacaggctaagtgaatatattttaaccgaagaccaattgcgagagaattgttatccgagg
ccccatgcagagaaaccgggtgttgcagtgctttataatcagaatgagaaaaagaacatc
cttgacccttccttaaggatctgctgccgttgtggagctgaatatgctgtttctgttagt
gggaactgtatacggaaagaagaatgcaactaccactggggacggatgcgtcgtcaaaaa
gtacctggtggttgggaaacacaatacaactgctgtgcaggagcaataggatctccaggc
tgtcagacagcgaagcaacatgttcaggatggtcgcaaagaaaacttagctggctttatg
aagacctttgaaaaagcaatgccaccagatgaaaacccagggatctttgctctagattgt
gaaatgtgctacacaaagcaaggtttggagctgagcagattgactgttgtaaactctgac
ctaaaggtgatgtacgatacatttgtcaaaccggacagtaaggttgttgattataacacc
agattttctggtgtaacagaggaggatatggcaagcacaacaatcacaatccgtgatgta
caggcagtattactgaatatgttcagtgctgccaccatattaatggggcacagcttggaa
agtgatttatttgcactaaagcttatgcatagcacagtgattgacacggcgattgtgttt
ccacatcgattgggattgccatataaaagagcactgagaaatttgatggcagactacctc
aaacgcattatccaggataacgttgaaggacatgattccagtgaagatgccagtgcctgt
atggaactaatgatctggagattaaaagaagatgcaaaactgagaagatga
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integrated database retrieval system
