KEGG   Leucoraja erinaceus (little skate): 129711134
Entry
129711134         CDS       T09122                                 
Symbol
sf3a2
Name
(RefSeq) LOW QUALITY PROTEIN: splicing factor 3A subunit 2
  KO
K12826  splicing factor 3A subunit 2
Organism
leri  Leucoraja erinaceus (little skate)
Pathway
leri03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:leri00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    129711134 (sf3a2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:leri03041]
    129711134 (sf3a2)
Spliceosome [BR:leri03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    129711134 (sf3a2)
 Complex B
    129711134 (sf3a2)
 Complex C
   U2 SnRNP specific factors
    129711134 (sf3a2)
SSDB
Motif
Pfam: SF3A2 zf-met CactinC_cactus PRP4
Other DBs
NCBI-GeneID: 129711134
NCBI-ProteinID: XP_055514536
LinkDB
Position
29:9790673..9802663
AA seq 459 aa
MDFQHRPGGKTGSGGVASSSESNRDRRERLRQLALETIDINKDPYFMKNHLGSYECKLCL
TLHNNEGSYLAHTQGKKHQTNLARRAAKEAKESPAQPAPEKVKVEVKKFVKIGRPGYKVT
KQRDSEVGQQSLLFQIDYPEIAETVIPRHRFMSAYEQRIEPPDRRWQYLLFAAEPYETIS
FKVPSREIDKVEGKFWTHWNRETKQFFLQFHFKMEKPLQPQSLPIGPPGLKTRPPPPPII
NGMPPRGPMPPGAMPTPRPAGMPMPPMPPGGPVPPQMPPAPQGPPPTPQGPPPTPQGPPP
TPQGPPPTPQGPPPTPHGMPPTPQGLPPQGMPPQGPPPQGMPPQGPPPQGPPPQGPPPQG
PPPQGPSPSRPTPQGPPPVQILPPAPQGPPPAPQGMPPAPISAPIPTPVSAPMPMIHVPG
PSPVPALPPMLRPPLPSESVQIVAPPIPLPPPGMPPPPN
NT seq 1380 nt   +upstreamnt  +downstreamnt
atggattttcaacatcgaccaggaggaaagactgggagcggcggggtcgcttcctcttcc
gaaagcaatcgagatcgaagagagcggctgagacagttagcgttggaaaccattgacata
aataaggatccttattttatgaaaaatcacttgggttcttacgaatgtaaactttgctta
actcttcacaataatgaggggagttatttggcccacacacaaggaaagaagcaccagact
aatttggcacgacgcgcagcgaaagaggcaaaggaatcaccagcacagccagcacctgag
aaggttaaagtggaggtgaagaaatttgtcaaaattggtcggccaggctacaaagtgacc
aaacaaagagattcagaagtgggacagcaaagtctcctttttcagattgattatccagaa
atcgcagaaactgtaataccacgccatcggtttatgtctgcgtacgaacaacgaattgaa
ccacctgacagacgctggcaatacttgttgtttgcagctgagccatacgagaccatttcc
tttaaggtaccgagtagagaaattgataaagttgaggggaagttttggacacactggaac
agagaaacaaaacagtttttccttcagttccacttcaagatggaaaagcctttacagcca
caatccttgcccattggaccccctggactgaagaccagaccaccgccgccaccgatcatc
aatggcatgccaccaaggggccccatgccgccaggcgcaatgccaactccgcgaccggca
ggcatgcccatgccgccaatgccacctggtggcccggtgccaccacaaatgccaccagct
ccacagggaccaccacccactccccagggacctcccccgaccccgcagggtccacccccg
accccacagggaccacccccgaccccgcagggaccgcccccgaccccacacggaatgccc
ccgaccccacaaggactgcccccacaaggcatgcccccacaaggcccacccccacaaggc
atgcccccacaaggccctcctccacaaggcccgcccccacaaggtcctcctccacaaggc
ccgcccccacaagggccctccccctcaaggcccaccccacaaggcccgccccctgttcag
atcctgcccccagctccgcaaggcccgcccccggctccgcagggcatgcctccagctcca
atttctgctccgattcccactccggtctctgctccaatgcccatgatccacgttccgggt
ccgtcccctgttccagctctaccgccaatgttaaggcctccgctccccagtgagtctgta
caaattgtggcacctcctattcctctcccaccccctggtatgccccctcctcctaactga

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