Leucoraja erinaceus (little skate): 129711226
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Entry
129711226 CDS
T09122
Symbol
cherp
Name
(RefSeq) calcium homeostasis endoplasmic reticulum protein isoform X1
KO
K12841
calcium homeostasis endoplasmic reticulum protein
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129711226 (cherp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
leri03041
]
129711226 (cherp)
Spliceosome [BR:
leri03041
]
Complex A
U2 snRNP components
U2 related factors
129711226 (cherp)
Complex B
129711226 (cherp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF7819
CID
Surp
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
129711226
NCBI-ProteinID:
XP_055514696
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All DBs
Position
29:15300656..15362183
Genome browser
AA seq
990 aa
AA seq
DB search
MDIPVPPEDQELRNVIDKLAQFVARNGPEFEKMTMEKQKDNPKFSFLFGGDYYNYYQYKL
AIEQQLLCNPSGQENEPPTQVPVPAPIPGQLPAPPSTTMPGPATAPALSQPPTPPGPGQP
QLEELIQQSLWNLQQQEQHLLMQRQEQITAAIALAMEQQIQKLLSETQLDMTEFDNLLQP
IIDTCTKDAISAGKNWMFNNAKTSQHCELMSGHLRNRITAEGAHFELRLHLIYLINDVLH
HCQRKQARDLLAALQKVVVPIYCTSFLAVEEDKQQKIARLLQLWEKNGYFDESIIQQLQS
PALGLGQYQASLITEFAAVVQPIQMAFQQQIQTLKAQHQEFVDSLTKHQQAQPPPQPPPQ
PQSQPQPQPLLEPEAPPPHIPMPQNQDLPDLSPTDSPEEAKPPHPLPDNVPSGGQEPPPV
GQRGPGQHEHSSSKPPWFERPAMPLWGQQQQQQFDQGFNAPHQGPPHCQPWNNNHEGMWN
DQREPNWNNQRDAPWNNQHEPSWNNQYEPPWNNQHEPSWGGQRDPPFRMQRPPHFRQQPP
FQQHQQHPPFNQPPHPHNFNRIPPRFMQDDFPPRHHFDRPPYPPHHFDYQQGDFPPDMGP
PHHPPHRLPPPGMGEPPPWGGPQHQDFGGPPPGFNGQPPHIRRQGPPPPQITPDDPSLVP
NVPYFDLPAGLMAPLVKLEDYDYKALEPKDMRLPPPMPPNERLLAAVEAFYSPPSHDRPR
NSEGWEQNGLYEFFRAKMRARRKKGQDKRNRGPNTATPGTLKPGARSEPHEPSGPKVEKR
GRSKSRSRSRSRRSSSGSSSRSSRSSGSYSRSRSQSRSRSRSHSYSASRSSRSRSGSSRS
QSGSRSRSRSRSFSPGKRRVSRSRSQTPPTTTGLGSDSASLTPDYRLGEENKGHQLLMKM
GWSGSGGLGAKEQGIQDPIKGGEIRDKWDQYKGVGVPLDDPYENYRRNKSYSFIARMKAR
DESHCSEEGDSGAAAAAGVKSAREDKAVLL
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atggatataccggtgcctcctgaggaccaggaattgaggaatgttattgacaaattggca
cagtttgtggcccggaatggtccagaatttgagaagatgacaatggagaagcaaaaagat
aatcccaagttttcttttctttttggaggagattactacaattactaccagtacaagttg
gcaattgagcagcaattgttgtgcaatccgtcaggacaagaaaacgagccaccaactcag
gtccccgtgccagccccaatcccaggccaactccctgcaccaccttccaccactatgcca
ggcccagctactgctccagccctatcccagcctcccacacctccaggtccaggccagcca
cagttggaggagttgatacaacagagcctatggaatctgcaacaacaggagcagcatctc
ctcatgcaaagacaggagcagataacagcagcgatcgccttggcaatggagcaacaaata
cagaaacttctatccgagacacaactggacatgactgaatttgacaatctcttgcagcca
attattgacacctgtaccaaagatgctatttctgctggtaagaactggatgtttaacaat
gcaaaaacctcacagcattgtgagctgatgtccggtcatttgaggaaccgaatcacagct
gaaggagcccattttgaactgcggctccatctgatctacctgataaatgatgtacttcat
cactgtcaacggaaacaagctcgagacctgctcgcagctctgcagaaagttgtggttccc
atttactgcaccagttttcttgctgtggaagaggacaaacaacagaagattgcaaggctg
ttacaactgtgggagaagaacggttattttgatgaatccattattcaacagttacaaagc
cctgctcttggacttgggcaataccaagcctctctcatcacagagtttgcagccgtggtg
cagcctattcaaatggcattccagcagcagatccagaccctgaaggctcaacatcaggaa
tttgttgacagtctcaccaaacatcaacaggcccagcctcctccacagccaccgccccag
ccacaatcacagccgcaaccacagccattattggaacctgaggcaccaccgccacacatc
ccaatgccccaaaatcaggatctgccggacctctcaccaacagactcaccagaggaggcc
aagccgccccatccccttcctgacaatgtgccaagtggagggcaggagccgcctccagtg
ggacagcgaggaccagggcaacatgaacactcttcttccaagccaccttggtttgaacgg
cctgcaatgcctctctgggggcaacagcaacaacaacagtttgaccagggttttaatgct
ccacaccagggcccacctcattgccagccctggaataacaaccatgaaggaatgtggaat
gaccagcgggaaccaaattggaacaaccagcgggatgctccatggaacaatcaacatgag
ccatcctggaataaccagtatgagcccccctggaacaaccagcatgagccctcctgggga
ggccagcgggatccaccatttagaatgcaacggcccccccatttccgccagcagccgccc
ttccagcaacaccaacagcacccaccatttaaccagccaccacatccccacaacttcaac
cgtatcccgccgcggttcatgcaggatgacttccctcccaggcaccactttgatcgtccc
ccctatcctccccaccatttcgactatcagcagggagactttccaccagacatgggcccc
ccgcaccatcctccacacagattgcctccacctggcatgggagaaccacctccatggggt
ggaccgcagcatcaggattttggtggtcctcccccaggttttaatggacagccgccacat
atccgacgtcaagggccacctccacctcagatcactcctgatgaccctagtttggtgccc
aatgtgccatattttgatctcccagcaggattaatggcacctctggtgaagttagaagac
tatgactacaaggctctggagcctaaagatatgcgccttccacctccaatgccacctaat
gagaggctgcttgctgcagttgaggcattttatagtccgccatctcatgacagaccaaga
aatagtgaaggctgggagcaaaatggactctatgaattcttccgagccaaaatgcgagca
cggagaaaaaaggggcaagataagagaaacagaggtccgaacacagctacacccggaacg
ttaaaaccaggagcccgttcagaacctcatgaacctagtggacctaaagtggagaaacgt
ggacgatcgaagtcccgcagtcggtcacggagcagacgttcttcctctggctccagttca
agatcttcacggtcctctggctcttattccagatcgagatcgcagtctcgatcccgctca
cgttctcattcatattctgcttcacgttccagtcgtagcagatcaggctcgtctcgcagt
cagtcgggttcaagatctcgctcacggtcacgatcgttctcaccggggaagaggcgggta
tcaaggtcacgtagccagactccaccaaccaccactggacttggcagtgattctgcctct
ctcacacctgattacagactgggagaggaaaacaaaggccatcagctgttaatgaagatg
ggttggagtggatcaggaggacttggagcaaaggagcaaggtatccaggacccaattaaa
ggaggagaaatccgtgataagtgggaccagtataaaggagtaggggtcccactcgacgat
ccgtatgagaattatcgaagaaataagagctactccttcatagctcggatgaaagcaaga
gatgaaagtcactgcagtgaagaaggagattcaggagcagccgccgccgccggagtgaag
tctgcaagagaagacaaagctgttctgctttag
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