KEGG   Leucoraja erinaceus (little skate): 129711273
Entry
129711273         CDS       T09122                                 
Symbol
kdm4b
Name
(RefSeq) lysine-specific demethylase 4B
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
leri  Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:leri00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:leri03036]
    129711273 (kdm4b)
Enzymes [BR:leri01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     129711273 (kdm4b)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     129711273 (kdm4b)
Chromosome and associated proteins [BR:leri03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    129711273 (kdm4b)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 zf-HC5HC2H PHD_2 JmjN PHD SLX1_C
Other DBs
NCBI-GeneID: 129711273
NCBI-ProteinID: XP_055514771
LinkDB
Position
29:17639709..17919856
AA seq 1095 aa
MESENPGPPNPNCKIMTFHPTVEEFKDFGKYIAYIESRGAHRAGLAKVIPPKEWKPRMSY
EEIDDMMIPAPIQQVVTGQSGLFTQYNIQKKCMTVGEYRKLAKSEKYCTPRYIDFDDLER
KYWKNLTFVSPIYGADISGSLYDNNVEEWNIGNLNTLLDMVEHECGIVIEGVNTPYLYFG
MWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAKGFFPGSSQGCDAFLR
HKMTLISPSILKKYSIPFNRITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATLRWIDY
GKMATQCSCRKDMVKISMDVFVQFLQPDRYELWKNGKDNVSIDHNKPTALSSPQMDDWLE
RKASLKAKCIRRSHRRRTQTRRQKTEEQKPVGEAATEETVGKDVIDEDAKVREEHKRTMD
TEEGSKPSKVTILEIGQDNLTENLFDHRFPANGKPLKSYSRSSKSKNEKRKKRVEPDTTA
ATSSDGTEARAESSRADSPTALATMLSESFAADAEFMPRSQPTMMYVLPKSKKVIFDKMH
MSCQQAFERFATRNKVASWKESETSNEGAAMEEEASDHESVDATFETTDVQLPPVYPKLK
KEITKSRRHPFSKPPARSPLSVVKLEPSSDEEMPVFSSEEDQTESEAWKTPLTHLWQSQS
YNFLAERKFNGSAALTEPFCAICTLFYPYYQPEREIAQGISIAEGNSISVAAKVGQKTKP
IIPEMCFTSGGENTEPLPTNSYIGEDGTSLLISCAKCCLQVHASCYGIRPDLVKDGWTCS
RCTANAWTAACCLCNLQGGALKSTTDKRWVHVICAIAVPEVRFLNVLERNPVDVSGIPEQ
RRKLKCVYCRKKVNSCTGTCIQCSYEHCSTSFHVTCAHAAGVVMEPDDWPYVVSIICYKH
KVTSQNQNREVTSVSLGQTVIAKNSSGRYCKCRVIGTAAQTFYEINFDDGSYSDNVYPEN
IVSRDCVQHGSPTEGDVIQVRWTDSRVYSAKFVGSQVRYNYQAEFEGGSQLTLKREEIFT
LDDELPKHVKLQLSLLNSQHEEVFSGEEEKDEKKTQSTNSKFLNDYSQKDYTQNPDYLTF
MENLFHPSYQQGYIN
NT seq 3288 nt   +upstreamnt  +downstreamnt
atggaatcagagaatccaggtcctcccaatccgaactgcaagatcatgacctttcatcca
acagtggaagagttcaaggattttgggaagtatattgcttatattgaatctcggggagcc
catcgggcaggtctggcaaaggtcattccacctaaggagtggaaaccaaggatgtcgtat
gaagaaatagatgatatgatgatcccagctccaatccaacaggtggtgactggccagtca
gggcttttcacacagtataacattcagaagaagtgcatgacagtcggggagtacaggaaa
ctggccaaaagtgagaagtattgtacaccacgctatatagattttgatgatcttgaacgc
aaatactggaagaacctgacatttgtttctcccatctatggagctgatatcagtggttct
ctgtatgacaataatgttgaggagtggaatattggaaatctgaacacgttgctggatatg
gtggagcatgaatgtggaattgtgattgaaggtgtaaatactccatacctgtacttcggg
atgtggaaaaccacttttgcctggcacactgaagacatggatctctacagcattaactat
ttgcactttggagaaccgaaatcttggtatgcaataccaccagaacatgggaaaaggcta
gaacggctcgcaaaaggcttctttccaggcagctctcaaggatgtgatgcatttcttcgc
cacaaaatgactctcatatcgccctccatattgaagaagtacagcattccttttaacagg
attacacaagaggctggcgagtttatgatcacctttccctatggctaccatgctggtttt
aaccatggattcaattgtgcagaatcaaccaactttgccacacttcgctggatcgattat
gggaaaatggctactcagtgcagctgcaggaaggacatggtaaagatatcaatggatgta
tttgtgcagttccttcagcctgatcgctatgaactgtggaaaaatggtaaagacaatgtc
agtattgatcacaacaagccaactgccctgtcaagccctcagatggatgactggctggag
cgaaaggcttcattaaaagccaaatgtattcgaaggtcacatcgacgaagaacgcagaca
aggagacaaaaaactgaagaacagaaaccagtgggtgaggctgcgactgaggaaactgtt
ggaaaagatgtgattgatgaggatgccaaagtcagggaagagcacaaaagaacaatggac
acggaagaaggcagcaaacctagcaaagttacaatattggagatcggacaagataatctc
acagaaaatttgtttgatcaccgttttccagcaaatggcaaaccactgaaatcatattct
cgttcttcaaaatccaaaaatgaaaagagaaagaaaagggtggaaccagacacaacagca
gctacctcaagtgatggcaccgaagccagagcagaatcatcccgtgcagattcacccact
gcattggcaactatgctgtcagagagttttgctgctgatgcagaatttatgcccagaagt
caacccaccatgatgtacgtactcccaaaatcaaaaaaggtgatctttgacaagatgcac
atgtcctgccagcaggccttcgagcggttcgccaccaggaacaaagtggcatcgtggaag
gaatcagagaccagcaatgagggagcagcaatggaggaggaagcaagtgaccatgaaagt
gttgacgccacttttgaaactactgatgtacagttgcctccagtttatccaaaattgaag
aaagagatcactaagagtcgacgccatccattcagtaaaccaccagctagatcgccgtta
tcagttgtcaaacttgaaccaagcagtgatgaagaaatgcccgttttctccagtgaagaa
gatcaaactgaatcagaggcttggaagacgccgctcactcacctttggcaaagtcaatca
tacaactttttggcagaaaggaagtttaatggatctgctgcactcactgagccattctgc
gctatctgtacgctattctatccctactaccagcctgaaagagaaattgctcagggcatt
tccatagctgaaggaaattccatctcagtggctgccaaggttgggcaaaagacaaagcca
atcatcccagaaatgtgtttcacatcaggtggagaaaacacagagcctctacctacaaac
tcgtacatcggtgaagatggtaccagcttgctaatttcctgtgcaaaatgctgtctacag
gtccatgcaagttgttatggtattcgaccagatttagtcaaagacggctggacctgctca
cgatgtacagctaatgcttggacagcggcttgctgtttgtgcaacttacaaggtggggca
ctgaaaagtactactgacaaaaggtgggtccatgtgatctgtgcaatagccgttcctgag
gtgagatttttgaacgtgttggagcgaaatccagttgatgtgtctgggattccagagcaa
aggcggaaattgaaatgtgtgtactgcagaaaaaaagtgaacagctgcacgggaacctgt
atccagtgttcgtacgagcattgttccacatcatttcatgtgacgtgtgcacatgctgca
ggggttgtaatggaaccagatgactggccctatgttgtatccatcatctgctataagcac
aaagtgaccagtcagaatcaaaaccgggaagttacatcggtgtcgttaggtcagacggtc
attgcaaaaaatagcagtggccgttactgcaagtgcagagtgattggaactgcagcacag
accttctacgaaatcaactttgatgatggatcctacagtgacaacgtatatcccgaaaat
attgttagcagggactgtgtacagcatggttcacccactgaaggggacgtcatccaggtg
cgatggactgacagccgggtatacagtgcaaagtttgttggttcccaggtcagatacaac
tatcaggcggagtttgagggaggctctcagctgaccttgaagagagaagagattttcaca
ctggatgatgagctaccaaagcatgtcaaattacaactatcactgctaaactcccagcat
gaggaagttttctcgggagaggaggagaaagatgaaaagaagactcagtcaacgaactct
aagttcctcaatgactacagccagaaagattacacccagaatcctgattatcttacattt
atggaaaacctctttcatccttcctaccagcagggatatattaattaa

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