Leucoraja erinaceus (little skate): 129711293
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Entry
129711293 CDS
T09122
Name
(RefSeq) polypyrimidine tract-binding protein 1-like isoform X1
KO
K13218
polypyrimidine tract-binding protein 1
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
leri03019
]
129711293
03041 Spliceosome [BR:
leri03041
]
129711293
Messenger RNA biogenesis [BR:
leri03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
129711293
Spliceosome [BR:
leri03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
129711293
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
Dynamin-like_hel_bact
Motif
Other DBs
NCBI-GeneID:
129711293
NCBI-ProteinID:
XP_055514815
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All DBs
Position
29:complement(20466281..20494701)
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AA seq
563 aa
AA seq
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MDGIVQDITVGTKRGSDELLSACATNGPYIMSSSSPPGEYTNGNDSKKFKGENRISGIMP
SRVIHIRKLPNDITEAEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVSYYGTV
TPYLRSHPIYIQYSNHKELKTDNSPNQARAQAALQAVNAVQNANMAIAGTGVPDTAVNLA
GQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADGSCAQHAK
LALDGQNIYNACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPTLDQTMAAFGK
EVSLLGAPGIISSPYGGGTGFPPGIAFQQAGFSVPGVHGALAPLGMQSAAAAAAASRMGI
PGFASAANAVLLVSNLNPERVTPQCLFILFGVYGDVQRVKILFNKKENALVQMFDCTQAQ
LAMSHLNGQRLHGKAMRVTMSKHQTVQLPREGQEDQGLTKDYSSSPLHRFKKPGSKNFQN
IFPPSATLHLSNIPPSVTEEDLKMLFSTTTGMVKAFKFFQKDRKMALIQMSSVEDAIQAL
IDLHNHDLGENHHLRVSFSKSTI
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atggacggcattgtccaagatataacagttggtacaaagcgggggtctgacgagctttta
tctgcttgtgctactaacggtccctacatcatgagcagctcttctccccctggtgaatac
accaatggcaacgacagcaagaagttcaaaggagagaatagaatttcggggataatgcct
tccagagtcatccacatccgcaaacttcccaacgacataactgaagcagaggtcatctcc
ctgggcctgccttttggaaaagttacaaatcttctcatgttaaaaggcaaaaatcaggct
ttcattgaaatgaatactgaagaagctgccaacacaatggttagctactatggcactgtc
actccatacctgaggagtcaccctatctacatccagtactctaaccacaaggaattgaaa
actgacaattctcccaatcaggctagagcacaagcagctcttcaggcagtaaatgcagtg
cagaatgcaaacatggccattgctggaacaggtgtcccagatactgcagtcaatcttgct
ggccagagccctgttcttcgaatcattgtggaaaatctcttctatccagttactcttgat
gttttgcaccagattttttccaagtttggcacggtgttgaagatcattactttcacaaag
aataaccaattccaggccttgctccaatatgctgatggctcctgtgcacaacatgctaaa
ctggccttggatggacagaacatctataatgcctgctgcactctgcgcattgacttctct
aagctgactagccttaatgttaagtacaataatgacaaaagcagagactacacgcgtcct
gacttgccatctggtgacagccagccaaccttagaccaaaccatggccgcttttggtaag
gaagtctccctactaggtgcaccaggtatcatctcctcgccttatggaggtggaactggt
tttcctcctggtattgccttccagcaagccggtttctctgtcccaggggtccatggagcc
ctggctccacttggcatgcagtcagcagctgcagcagcagcagcaagtcgcatggggatt
ccaggcttcgcctctgcagccaatgctgtcctgctggtcagcaacctgaatcctgagaga
gttacgccccaatgcctctttattcttttcggagtgtatggtgatgtgcaacgtgtgaag
atactcttcaacaagaaagaaaatgccttggttcaaatgtttgactgtactcaagcacaa
ctggctatgagccatttaaatggtcagaggcttcacgggaaggcgatgcgtgtgaccatg
tccaagcaccagacagtacagcttccccgtgagggccaggaggaccagggattgaccaag
gactacagcagctcaccactgcatcgttttaagaaacctggatcaaagaatttccaaaac
atctttcctccttctgccacccttcatctctccaatattccaccttcagttactgaagag
gatctcaagatgctcttctccacaacgacaggcatggtcaaggcattcaagttcttccag
aaggatcgcaagatggctctcatccagatgagttcagtggaagatgcaatccaagctctt
attgatcttcataatcatgatcttggggaaaaccaccacctcagagtctccttctccaag
tccactatttga
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