KEGG   Leucoraja erinaceus (little skate): 129711333
Entry
129711333         CDS       T09122                                 
Name
(RefSeq) transducin-like enhancer protein 1 isoform X1
  KO
K04497  groucho
Organism
leri  Leucoraja erinaceus (little skate)
Pathway
leri04310  Wnt signaling pathway
leri04330  Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:leri00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    129711333
   04330 Notch signaling pathway
    129711333
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:leri04812]
    129711333
Cytoskeleton proteins [BR:leri04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    ADF / Cofilin
     SCMC complex
      129711333
SSDB
Motif
Pfam: TLE_N Beta-prop_THOC3 Beta-prop_WDR3_1st Beta-prop_IFT122_1st WD40 Beta-prop_WDR5 WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st EIF3I Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd WDR55 Beta-prop_TEP1_2nd WD40_Gbeta Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_1st ANAPC4_WD40 Beta-prop_EML WD40_MABP1-WDR62_2nd CFAP251_N Beta-prop_ACSF4 Beta-prop_WDR41 NBCH_WD40 Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 DSE1_N Beta-prop_IFT140_1st Beta-prop_NOL10_N WDR90_beta-prop_4th Beta-prop_Aladin Beta-prop_VPS8 Beta-prop_SPT8 Beta-prop_Nup120_160 ASA1 Beta-prop_NUP159_NUP214 WD40_RFWD3 Beta-prop_IP5PC_F HALZ Beta-prop_Vps41
Other DBs
NCBI-GeneID: 129711333
NCBI-ProteinID: XP_055514894
LinkDB
Position
29:24262292..24445805
AA seq 802 aa
MFPHNRSSVPPSAAPTASSQTLKFTFPETLDRIKEEFQFLQAQYHSLKMECEKLASEKTE
MQRHYVMYYEMSYGLNLEMHKQTEIAKRLNVICAQLLPYLSQEHQQQVIQTIERAKQVTM
GELNAAIGVRGLPILPPPHHFQPQQLSHHASPFPLALHPTGLQLPAMSSIGASSGLLALS
NALAAHPQFALKEDKNHQEQEHRRDRDQGSEAETSREMSDAKARRHRCWKSERRTESAED
SQQSSVHSSNGDKPRNSSEYPIHLKKKKTEERDSVNDYDSDDDKSDDNLVVDVSNEEPSS
PRSSPPQAAHENGLDKLHVRRKTQVNSPTSLVTTSCTPPPLKSKEPVANEKSSTPGLKSS
VPPSRSDSATPSTSGTSQHCSAAGKAGADPLALGLKTPLSVQGAFPVPFGMVHTAVNGGI
AGANAYGGLHFASPQLNGGATASTFGRSSVAGFEHHTHKRTAGLPGSLSAATAGKPAYSF
HVGADRQMQPVAFPTDALTGTGIPRHARQINNLPHGEVVCAVAVSNFTKHVYTGGKGCVK
VWDISQPGNRSPVSQLDCLNRDNYIRTCKLYPDGRNLIVGGEANIISIWDLAAPSPRIKA
ELESSAPACYALAVSPDAKVCFSCCSDGSIFVWDLHNETIIRQFHGHTDGVSCTDISNDG
TKLWTGALDNTVRCWDLREGRQVHQHDFASQIFALGCCPTGGWLAVGTESSNVEVLHVNK
PDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRVPYGASIFQSKESSSVLCCDIS
VDDQYVVTGSGDKKATVYEVIY
NT seq 2409 nt   +upstreamnt  +downstreamnt
atgtttccccacaaccgctcgtcggtaccgccatccgccgccccaactgcctcatcccaa
actttgaaattcaccttcccagaaacgttggatcggattaaggaagaattccagtttctg
caggcacagtaccacagcctcaagatggagtgcgaaaagttggccagtgaaaagacggag
atgcaacgacattacgtgatgtactatgagatgtcatatggcctcaatcttgagatgcat
aaacaaacggaaatagcaaagagactgaatgtgatttgtgctcagctcctcccttatcta
tcgcaagaacatcaacaacaggtaatccagaccattgaacgtgcaaagcaggtaaccatg
ggcgagttaaatgctgcaattggagttcgaggacttcctattctaccacccccacaccat
ttccaaccccagcagctctcccaccacgcctctccgttcccgctcgctctccacccaaca
gggctgcagctcccggccatgtcttcaattggagccagctcgggactgctggccctctcc
aacgccctggcggctcacccccagtttgcccttaaagaagacaagaaccatcaggagcag
gagcatcggcgagacagagaccaagggtcggaggcagagacaagtcgtgaaatgtcggat
gcaaaagcaagaaggcacagatgctggaaatctgaaagaagaacagaaagtgccgaggat
tctcagcagagttctgtacactcgtccaatggagacaagccaagaaactcctcggaatat
cccatccacctcaagaagaagaaaactgaggaacgggattcagtgaatgactatgacagc
gatgatgacaagagtgacgataatctcgtcgttgatgtttccaatgaggagccatcgtct
cctcgcagtagccctccgcaagcagcgcacgagaatggactggacaagcttcacgtgagg
aggaagactcaggtgaacagtcccacgtcgctggttacaacaagctgcaccccgcctccg
ctaaaaagcaaagagccggttgcgaatgagaagtccagcacacctggtctgaaatccagc
gtgccaccgtcccggagtgactcagcgacgcccagcaccagtggcacctcccagcactgc
tcagcggctggcaaagcaggggcggatcctctcgctttagggttgaaaacaccgctgtcc
gtgcagggtgcattcccggtgccattcgggatggtccacactgcggtgaacggtgggatc
gccggtgccaatgcctacgggggcctgcactttgcttcccctcaactcaacggcggtgcc
acagcctcaacgtttggtcgctcatcggtggctggatttgaacatcacacacacaagcgg
acggcaggacttcccgggagcctgtcagcggcgactgcagggaagcccgcctactcgttc
cacgtcggagcagaccggcagatgcagcccgtggcgttcccgacggacgcgctgaccggg
acgggcattccccggcatgcccggcagatcaacaacctcccccacggggaggtggtgtgc
gccgtggccgtcagcaacttcaccaagcacgtgtacacgggcggaaagggctgcgtgaag
gtgtgggacatcagccagcccggaaacagaagccccgtctctcagttggattgtctgaac
agagacaactacatccgcacctgcaagctttaccccgacggccgtaatctgatcgtgggc
ggggaagccaacatcatttccatatgggacctcgcagctccaagccctcggatcaaggcg
gagctggaatccagcgctcccgcctgctacgctctggccgtcagcccggacgccaaagtc
tgcttctcctgctgcagtgacggaagcatctttgtctgggacttgcacaatgagacgatc
attaggcagttccatggccacaccgatggtgtcagctgcacagatatttccaatgacggg
acaaagctgtggaccggcgcgctggacaacaccgtcaggtgctgggacctgcgggagggg
cggcaggtgcatcaacatgactttgcatcacagatctttgcactaggatgctgcccgaca
ggaggttggcttgctgttggcacggagagcagcaacgtggaggttttacatgtcaacaaa
ccagataaatatcaactccaccttcacgagagctgcgttctctcactcaaatttgcttat
tgtggtaaatggtttgtaagcactggaaaagacaacttgctgaatgcatggagagtaccg
tatggagcaagtatattccagtccaaagagtcatcgtctgtgctatgctgtgacatctcg
gtggacgaccaatatgttgtcactggctcaggggacaagaaagccacagtgtatgaagtc
atttactga

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