Leucoraja erinaceus (little skate): 129711431
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Entry
129711431 CDS
T09122
Symbol
ap5b1
Name
(RefSeq) LOW QUALITY PROTEIN: AP-5 complex subunit beta-1
KO
K19022
AP-5 complex subunit beta-1
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
leri03400
]
129711431 (ap5b1)
DNA repair and recombination proteins [BR:
leri03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
129711431 (ap5b1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
AP5B1_barrel
AP5B1_N
ANTH
Motif
Other DBs
NCBI-GeneID:
129711431
NCBI-ProteinID:
XP_055515013
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All DBs
Position
30:complement(173701..183937)
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AA seq
925 aa
AA seq
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MAVSSNHEWTQKVAAFHANPSHFLASTTAENFVHDLLRVLTDEKMGENIKVQILVILQEF
PTLLLVSSQSAGRAVESVFNLYLRLPLTPKTLKLKCHLLLSVTTIVIATDDLLSDEQTLK
NLMKQLLDVACDSNDHRNGVTFRPLRAVVCDCLREFETCYPGLLSGKLELLSSLQRREVT
PLHQAYTLLYSQVLKNAIHTVAQVHNASGGTIREMLERNEDIKWKGREKQQELAAVTVTT
NLSLFPSADETKELKSCVSLLLEESFLLTPASQAVLLRELAQVVLMVHSLSPAMFRSQIL
RLFGTMDVSLLHTMLYMKATFTDSLFTVEDENLLLKRLVGMAQHPLLGVPIKLFYMDCLL
HFPENRPLSSNLQENLPVLFTSRMANCLFPTLFNDSSTMLGRLNLLSLVCLENGVDERGI
AEIFDYLMSLYKLVDISGSRDRIVTFFQAVYIFVSHFYTNEEYMAELTNRMVQLYDKHCS
LAPHMINLISSTQNLLEDCKWPVSLAGALQKLIVALPLQQLPPNLMWHLKVLARVAKEGS
IPQKGTVQFLLIVIRSCNVCGMGEWQMGNAVLSVCRNILHCQNLEPIFKDLADLLQHLHL
WFQDIDIQDHAHFYYALLTCLSTDKLAGIVAEGSGNCSCTKIRSLSLMSESAGSSVSVLP
VKYPILQLIPIPENACPTVSPAGEASEQDIGEDYLEKYLGQFCDPGFASTITLTFHLGFV
EKVDPHFHKIFTILLHFDLQSSHYEPLSDLLVPCLLFNKKPHAFSLVFKPRSPFPFTLHT
SAIFTTEDGDTYCSQIQPVDVGFPRLFLPLPVPLSWPPEVKVSLFTKLWTSLIQNGSSQS
ILSRFCFKTAQGPLCELIRLHFQKYVVSQHSQPESYKVFLFLPPCINVLFQLEQIDDIVK
VDIVTDNWKLLPFINSYLVDMTSKN
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atggcagtgtcgtctaatcacgaatggacccaaaaggtagcagcattccatgccaatcca
tcgcactttcttgcaagtacaacagctgagaactttgtgcatgatttgctgagagtcctt
accgatgagaagatgggtgaaaatatcaaggtgcagatcctcgtcattcttcaggagttt
ccaactttgttgttggtcagctcgcagtcagcaggaagggcagtggagtctgtcttcaac
ctctatttgcggttgccattgacgcccaagacactgaagttgaaatgccatctgctgctc
tcagtgaccaccatagtaattgccactgatgatctgctgagtgatgagcagacactgaag
aacttgatgaagcagctgctcgatgtggcgtgcgattcaaacgatcacagaaacggcgtg
actttccggcctctcagggctgtggtgtgcgactgcctccgggaatttgaaacttgctat
ccaggtctcctgtcagggaaattggagcttctatctagcctccagagaagggaggtgact
cctctgcaccaggcctacacactcctgtacagccaggtgttgaaaaatgcaattcacaca
gttgcacaggtgcataatgctagtgggggcaccatccgggagatgttggaacggaatgaa
gacatcaaatggaaggggagggagaagcagcaggagctggcagctgtcacagtaacaact
aatttgtcattgtttccttctgctgatgaaacaaaggagctgaagtcttgtgtatcatta
ctgctggaggagtccttcctcttaactccagcttctcaagctgttttgcttcgggagttg
gcccaggtcgttctgatggtgcactcactttctccagcgatgttcaggtcgcagatattg
cgtctgtttgggacgatggacgtgtccttgctccacaccatgctctacatgaaggcaacc
ttcaccgacagtctattcactgttgaggatgagaacctccttttgaaacgtctagttggc
atggcccagcacccactgctcggtgttcctatcaaactcttctacatggactgtctgctt
cacttccctgaaaaccgcccccttagctctaacctgcaagagaatcttcccgttctgttc
acctcgaggatggcaaattgcctattccccaccctgtttaatgacagcagtacgatgctg
ggccgtctcaacctactgagtcttgtgtgcctggagaatggggtggatgaaagaggcatc
gctgagatctttgattacctgatgtctttatacaaactggtagacatcagtggaagcagg
gacaggatagtaacctttttccaagcggtttacatatttgtgagtcacttctataccaat
gaggagtatatggcagagttgaccaaccgtatggtccaattgtatgacaagcattgcagc
ttagctccacatatgatcaaccttataagcagcacccaaaacctgctggaagattgtaaa
tggcccgtttcgctagcaggggccctgcagaagctgatcgtggcactgccattacagcaa
ttgcctcctaatctcatgtggcatcttaaagtcctggcgagagtggccaaagaaggcagc
atcccacagaaaggcaccgttcagttcctgctgattgtcatccggtcttgcaacgtgtgt
gggatgggtgagtggcaaatgggtaatgccgtcctgtctgtgtgcagaaacatattgcac
tgccagaacttggagcccatcttcaaggatcttgctgatctcttgcagcaccttcacctc
tggttccaagacattgacattcaagatcacgctcacttctattatgcgctgctcacgtgt
ctctccactgacaagctggcagggattgtggcagagggctcgggcaactgcagttgcacc
aagatccgttccctttctctcatgtcggagagtgccggctcctctgtctccgttcttcca
gtcaaatatccaatactccaacttattccaattccagaaaatgcctgtccaacagtcagt
cctgcaggagaagccagtgaacaggacatcggggaagattacttggaaaaatacttgggt
cagttttgtgatcctggatttgcttctacaattaccttgacatttcatttgggttttgtg
gagaaagttgatccacattttcacaaaatctttaccatacttctccactttgacttgcag
agctctcactatgagccgttgagtgatctcctcgtaccctgtctcctcttcaacaaaaag
ccccatgctttctctctggtgttcaagccacggtcaccgttccctttcaccttgcatacg
agcgccatttttaccacagaggacggcgacacttattgcagtcagatccagcctgttgat
gttgggttcccgaggctgttcctgccccttcctgtgcctctcagctggcctccagaagtt
aaggttagcctcttcaccaagctgtggacatcactgatccaaaacggatccagccagtcc
attctcagtcgtttctgcttcaagacggcccaagggcctctttgcgaactgatacgcttg
cactttcaaaagtatgtggtctcccaacattcacagccagagtcctacaaggtttttctg
ttcctgcccccgtgcatcaatgttttgttccaactagagcaaatagatgatattgtgaag
gttgatatagtcactgataactggaaacttttaccattcattaattcttaccttgtggat
atgacgtctaaaaactag
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