Leucoraja erinaceus (little skate): 129711461
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Entry
129711461 CDS
T09122
Symbol
irx1b
Name
(RefSeq) iroquois-class homeodomain protein IRX-1b
KO
K24889
iroquois-class homeodomain protein IRX
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
leri03000
]
129711461 (irx1b)
Transcription factors [BR:
leri03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
129711461 (irx1b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
MRP-S32
Dicty_REP
Motif
Other DBs
NCBI-GeneID:
129711461
NCBI-ProteinID:
XP_055515054
LinkDB
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Position
2:78400152..78405631
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AA seq
442 aa
AA seq
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MAFPQLGYPQYLSASQAVYAADRQGVLASSRGGAELGANPAAAVTSVLGMYANPYTAQNY
SAFLPYTTDLTMFSQMGSQYELKDNPGVHPATFAAHAAPAYYPYGQFQYGDPARPKNATR
ESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWGAR
NKEDDGTLYGSDTEGENEKKEEDEEIDLESIDIDKIDENDEEQSNGEEEEKLNPSDEREK
VDLESEHDRTLQGSVVDSKARETDRDDGNVADSNGTRGISLGQGNLLIPNHSKPKIWSLA
ETATSPDSAQKSSPTNHTQSTIQHPAFLSNHGLYTCQISKFHNWTNGAFLGQNSLLNVRS
FLGANHHHHHHHQQQQSAVLTAALGAMSNEKSTDIHSPKHTERDCIPGESPSQQLKISYQ
PLNESSRPQQEGTRVLAGISSV
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggccttccctcagctcggataccctcagtatctaagtgcgagccaggctgtttatgct
gccgatcggcagggagtgctggcttcttcccgaggaggagccgagcttggggctaatccc
gccgctgctgtaacctcggtgttgggaatgtatgcaaacccttacacagctcagaactac
agcgccttccttccctacaccaccgatctcaccatgttctcccaaatgggatcgcaatac
gaattaaaggataatcctggggtccatccggcaacgttcgcagcccatgcggctcctgct
tattatccctatggacagttccagtacggggatccagccagacccaagaatgcaacccgg
gagagcaccagcacgctcaaggcctggctcaacgagcacagaaagaacccctaccccacc
aaaggggaaaaaatcatgctggccatcatcaccaagatgaccctgacccaggtttccact
tggttcgccaacgccaggaggagactcaagaaggagaataaaatgacctggggcgcccgg
aataaggaagacgacggtacactttacggcagtgacacagaaggggagaacgagaaaaaa
gaagaggatgaagagattgacctagagagtatcgacatcgacaaaatcgacgaaaacgac
gaggagcaaagtaatggagaggaggaggaaaaacttaatcccagtgacgagagggagaaa
gtggatttggagagtgagcacgatcggactttgcaagggtctgttgttgacagcaaagcg
agggagacggacagagatgatggaaatgttgccgatagtaatggcaccagggggatttca
ttagggcaggggaatttactaatcccaaatcacagcaaacctaaaatctggtcgttggca
gaaactgcgaccagtccagacagtgcccagaaatcctcaccaactaaccacactcagtca
accattcagcacccggctttcctctcaaaccacggactctacacatgtcagatcagcaag
tttcataattggacaaacggtgctttcctgggccagaactctttgctaaatgtcaggtct
tttctgggtgcaaatcatcaccaccaccaccaccatcagcagcaacagtcggctgtgcta
acggcagcactgggagcaatgagcaatgaaaaatcaacagatatacacagtccaaaacac
acagaaagagattgtattccaggtgaatctccatcacagcaattaaaaatatcatatcaa
cccttaaacgaaagctcacggcctcagcaggaagggacgagagttttagcaggcatctct
tccgtctga
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