Leucoraja erinaceus (little skate): 129711567
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Entry
129711567 CDS
T09122
Name
(RefSeq) LOW QUALITY PROTEIN: tumor necrosis factor receptor superfamily member 1B-like
KO
K05141
tumor necrosis factor receptor superfamily member 1B
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri04060
Cytokine-cytokine receptor interaction
leri04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
129711567
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
129711567
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
leri04050
]
129711567
04090 CD molecules [BR:
leri04090
]
129711567
Cytokine receptors [BR:
leri04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
129711567
CD molecules [BR:
leri04090
]
Proteins
129711567
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNFR_c6
TED6
Motif
Other DBs
NCBI-GeneID:
129711567
NCBI-ProteinID:
XP_055515245
LinkDB
All DBs
Position
30:5854062..5879946
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AA seq
500 aa
AA seq
DB search
MISQRLLYVFLMALPGVAAEQDYPLPMKSASDCLNTMTAYFNKELNWCCSNCQPGTRVVQ
HCTKEMDTQCKPCGEKQFTAYWHRMKKCKGCAAQCSDDQEENQPCTPTTMRVCHCRQGFY
CIDPSDRTCNRCLKYHECKDGFGVIEQGNKDADVKCAPCASGTFSDKISATETCRPHIKC
AALGREILHEGNSREDAVCGDELQPRSPTPRTIVATGAGGTPLPQDTPDTTVEPINKTLA
TGGKPPPHILSRPWLLGIGFGGLALIVLVVVATVCLLHKRKGRTPDPKDEVPPENVAQVE
TTCLISETEAKQVPGSRSWEQNGGAGSLGSSLSRSSSEESRDARKNGLKEEDQLQTHVAL
LKNDSQADCQEDQGYISRESRPSSGTPSPIMEFSGNPTVSVTINTGKCFVNCYHCQEDKS
SGPGLDVDQSRTPEEEQGIELDEGFPIQEEQRDSDSEKWKENGSSVVAMPQASWLDNSVP
HQEEGKESHLPVQDTSGNVY
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgatctcccaacgccttctgtacgtgttcctgatggcgctgcccggggtcgcggctgaa
caggattatcctctcccaatgaaaagtgcatctgactgcctgaatacaatgacagcatac
ttcaataaagagctaaattggtgctgcagtaattgccaaccaggtacccgtgtggtccag
cattgcacgaaggagatggacacacaatgcaagccctgcggggagaagcagttcacggca
tattggcacaggatgaagaaatgcaagggatgtgcagctcagtgctcggatgaccaggaa
gagaaccagccctgcacaccgaccaccatgagggtgtgtcactgccgccagggcttctac
tgcattgatccttctgacaggacgtgtaaccgttgcctgaaataccatgaatgcaaggat
ggttttggtgtcatcgagcaaggaaataaagacgctgatgtaaaatgtgctccatgtgct
tctggaacattctctgacaaaatctctgccaccgagacctgcagaccgcacattaagtgt
gcagcgctggggagagagattttacacgagggaaacagcagggaagatgcagtttgcggt
gatgaactacagccacggtccccgactccgaggaccatcgttgcaacgggtgcaggtggt
acccctctgccacaggacacacctgacactactgtggaaccaataaacaagactcttgcc
acaggcggcaagccccccccgcacattctttctcgtccctggttgctgggtattggcttt
gggggtttggccttaatcgttttggtcgttgtggctacagtctgtctccttcacaagaga
aaaggacggacgcctgatccaaaagatgaagtgcctccggagaatgtggcccaagtagag
acgacctgtttaattagcgagactgaagccaagcaggtgcctgggagcaggagctgggag
cagaatggtggagcagggtcactgggctcttcattgtccaggtccagcagtgaggagtca
cgagacgccaggaagaacggcctgaaggaggaggatcagttgcagactcacgttgctctt
ttgaagaatgattcacaggcggattgtcaagaagaccagggatacatcagccgggaatcc
cggcccagctcaggaaccccgtcacccatcatggaattcagcggaaacccaacggtgagc
gttacgataaacaccggcaagtgtttcgtcaactgctaccattgtcaggaggacaagtcc
tctggcccagggttggatgtggaccagagtcgcactcccgaggaggagcaggggattgaa
ctggatgaggggttcccaatccaggaggaacagagggattcggattcggagaagtggaag
gagaatggttcttctgtggtggcgatgccccaggccagctggctggacaactcggtgcca
catcaggaggaagggaaggagtcgcatcttcccgttcaagacacatctgggaatgtttac
tga
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