Leucoraja erinacea (little skate): 129711655
Help
Entry
129711655 CDS
T09122
Symbol
zbtb40
Name
(RefSeq) zinc finger and BTB domain-containing protein 40 isoform X1
KO
K10512
zinc finger and BTB domain-containing protein 40
Organism
leri
Leucoraja erinacea (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
leri03000
]
129711655 (zbtb40)
04121 Ubiquitin system [BR:
leri04121
]
129711655 (zbtb40)
Transcription factors [BR:
leri03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
129711655 (zbtb40)
Ubiquitin system [BR:
leri04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
129711655 (zbtb40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
BTB
zf-C2H2_jaz
zf-met
zf-C2H2_6
zf-C2HC_2
Zap1_zf1
zf-H2C2_5
zf-C2H2_11
DUF2288
Motif
Other DBs
NCBI-GeneID:
129711655
NCBI-ProteinID:
XP_055515429
LinkDB
All DBs
Position
30:complement(13829800..13870145)
Genome browser
AA seq
1249 aa
AA seq
DB search
MELPNYSGQLMQQLYTLRKEEQFCDCTLFIGSTEFRAHKLVLAASSLLFKSLLDNTDTIS
IDQAVVCPEEFAILLEMVYTGKVPPGKHNFTKVVSVADNLQMFDIAVSCKNIVASLMKHT
TASEVRVSMDEVVQHIIAQSPAGTNWVVQESGKNKESCTTNAETVVSDKNISVQGLNCTG
TVGFMEAALPSDENTVYAENDEPKQDGEHQENLPDTSANNIQDINKPPDCIGTIKEEMVT
ESSCEKEKHVGPVDSRNLTEQEFLLLHRQDLAEAVQDVQGLVESVTKCDDIPLPEKTVFL
DCCKEAESSEVFCRLLDRITEAKTLQLETLLFVLQQSKEAYPRLKTVLQNLNQNLPIEHL
MLTGRIDTEDFLLNLYLHKDELLESVTDLSPLLACLESAEETIFNEEEKKVIAECCEGET
PRNAMAKLLRKTIEERQLSAETALNLLQTMKEVCPVLQSLLRTLTEEPGITTKSGVKNLE
DCAFDLLRRYQENIVDVVVELQTLHNVLSISEDISDDDKQRIEDLINEKDVVNCTNKLME
AVLEKQTLAALTLWKVLIRMKEDVPKLCTLLDELQKEPDGLRLILSVSDEESKAFSILRK
HRRLIINGIEDISPLLDCLVPGVENLPAETIEILKSCCFKDTAGQSLESILGKILEERLI
PALVFCKLLHMISESHPSLELVMKTMEHAGLLKEAMSDLEEDQKEYPMDLDERSEEDGDH
PVGTGHVKESSGDPAMDPMKPMHKPRGKQDFSCSACGKTFMFKCRLELHLTRCRKIGPLK
TVNWEECEETRTSQKNLENPREDVHVAPKGKKRRLPVSCDICGKSFAHQSGMQYHKRSDH
FDEKPFSCNDCGAKFAANSTLKNHMRLHTGEKPFFCKLCDMTFVQAAALAYHMKKKHSEG
KMYACQYCDTVFAQSIELTRHVRTHTGDKPYVCRECGKGFSQANGLSMHLRSFHNVEDPY
DCQKCRMSFPSLEEHKKHIQEVHPPEYNPCDVCGKNFSAPSLLERHVVTHVGGKPYNCEI
CDKAYQQLSGLWYHNRTHHPDIFAAQNHRSPKFATLTCSACEKSFASMTALNKHVKSDHS
DMKMLECEECNETFASQALLHVHTKSKHSGIHPFKCTYCPSTFRFPGALQHHLSTEHSTQ
QTSTFLCGDCAQLFGSQRDLEEHQRSKHARILFANVQEAAQMVIQATGQLTATQQVISLE
ETHLAGVASQVFVALPDSQNGSSGHHEVVALNVDDLLDGTVTLICGETP
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atggaattgccaaactacagcgggcagctcatgcagcaactgtataccttgaggaaagag
gagcagttctgtgattgcaccctattcattggaagcactgagtttagagcacacaagcta
gtgctggctgcttccagtttgttgttcaaatctctcctggataacacggacacaatttct
attgaccaggcagtagtatgcccagaagagtttgctatccttttggagatggtctacaca
ggaaaggtgcctccaggaaagcacaacttcacaaaagttgtttctgttgcagataatttg
cagatgtttgacattgctgtgagctgtaagaacatcgtggcaagcctgatgaaacatacc
acggcaagtgaggtgcgggtttctatggacgaagtggtgcagcacataatcgcacagagt
ccagctggcacaaattgggtggtgcaagagtcaggcaaaaataaagagtcttgtaccaca
aatgctgaaacagtggtttcagataagaatatttctgtgcaaggattaaattgcactggc
acagtgggctttatggaggctgctcttccctctgatgaaaatactgtgtatgctgaaaat
gatgaaccaaaacaagatggagagcaccaggaaaatttaccagatacaagtgctaataac
atccaggacattaataaaccaccagattgtattggaacaatcaaagaagagatggttact
gaatcatcttgtgaaaaagagaagcatgtgggcccagtagattcgaggaatctcacagaa
caggagttcctattactgcacagacaggatcttgcagaggcagtccaagacgtgcaaggt
ttagtggaatctgtgacaaaatgtgatgatatcccattgccagagaaaacggttttctta
gactgctgtaaagaagcagaaagcagtgaggttttctgcagattactggacagaattaca
gaagcgaagactttgcaactagaaaccctgttatttgtgcttcaacagagtaaagaagct
taccccagactgaaaactgtacttcagaacttaaaccaaaatctgcccatagagcattta
atgctaactggccgtattgacacagaagattttttgctcaatctttatttacacaaagac
gagctcttggaaagtgtgacagatttgagtcctttattggcgtgtcttgagtctgctgag
gaaaccattttcaatgaagaggagaaaaaggtgattgcggaatgctgcgaaggagagaca
cccagaaatgccatggctaagttattgaggaaaacaattgaagagagacaattaagtgct
gagactgcattaaatcttctccaaacaatgaaagaggtttgccctgttctacagtcatta
ctaaggactctcactgaagaaccaggaataactacaaagtcaggagtgaaaaaccttgaa
gattgtgcatttgacttgctcaggagatatcaagagaatattgttgatgtggtggttgag
cttcaaaccctgcacaatgtcttgtctatttcagaggatatatctgatgacgacaaacag
agaattgaagatcttattaatgaaaaagatgtggtgaattgcacaaataagttgatggaa
gcagtgttagagaaacaaacgctggcagcactcactctatggaaagtgctcatccgaatg
aaagaggatgtgccaaagctgtgcaccctgctggatgaactccaaaaagaaccagatggt
ctccgactcattttatcagtgagtgatgaggaaagtaaagccttcagtattttaagaaaa
cacagacggttgatcatcaatggaattgaggacatcagtccactgctggactgtttggta
cctggtgtagaaaatcttcccgctgaaacaattgagattttgaagagctgttgtttcaag
gatactgctggtcagtcactagaaagtattctgggcaaaattctagaagaacgactcatt
cctgccctggtgttttgtaaactcttgcatatgatcagtgagtcccatccgtcccttgaa
ttggtaatgaagacaatggaacatgcagggctattgaaagaagcaatgagtgatctggaa
gaggatcagaaggaatatccaatggatctggatgagagaagtgaggaagatggggatcac
cctgttggcactggccatgtcaaggaaagtagcggtgatccagcaatggatccgatgaag
ccaatgcacaaacccaggggaaagcaggacttttcctgttctgcatgtggcaagactttc
atgtttaaatgtcgtcttgagctacacctcacccgctgtcgcaagattggtccacttaaa
accgttaactgggaggaatgtgaagagactaggacttcccaaaagaatttagaaaatccc
cgagaagatgtgcatgttgcaccaaagggaaagaagagaaggctgccagtatcttgtgac
atctgcgggaagtcctttgctcaccagtcaggaatgcaatatcataagcgctctgatcac
tttgatgagaagcccttctcctgcaatgactgtggggcaaaatttgcagcaaattccacg
ctgaagaatcacatgagactccatactggagagaagccattcttttgcaaactttgtgac
atgacatttgtacaagctgctgccttggcatatcacatgaagaaaaaacattcggaagga
aaaatgtacgcttgtcagtactgtgatacagtgtttgctcagtcaattgaattgacccgc
catgtgcggacacacactggggacaagccatatgtctgccgggaatgtggcaaagggttc
agccaggccaatgggctctctatgcacttgcgctcctttcacaatgtggaagacccatat
gactgtcagaagtgccgaatgagtttcccatctctagaagagcacaagaagcacatccag
gaagtgcatcctcccgagtacaatccctgtgatgtttgtggcaagaattttagtgcacca
tcacttctcgaaagacacgtggttacacatgttggtggaaagccatataactgtgaaatt
tgtgacaaggcttatcagcaattgtctggactgtggtatcacaatcgaactcatcaccct
gacatctttgcagcacaaaatcaccgctctccaaagtttgccactctgacttgctcagct
tgtgaaaaatcctttgccagtatgacagctctgaacaaacacgtgaaatctgaccattca
gatatgaagatgttggagtgtgaagaatgcaatgagacttttgcttcacaagcgttattg
catgtacatacaaagtccaaacattcaggtatccatccatttaaatgtacatactgcccg
tcaacattcagatttcccggagctttgcagcatcatttgagcacagaacattcaactcaa
caaaccagcactttcctgtgcggggattgtgcccagctgttcggttctcagcgggacctg
gaagagcatcagaggagcaagcatgctagaatcctgtttgctaatgttcaagaggcagca
caaatggttatccaagcaactggacaattgacagccacccagcaggtcatttctctggag
gaaactcacctggctggtgttgcatcgcaggtatttgtggcattgcccgattctcagaat
ggttcctcaggacatcatgaagttgttgctcttaatgtggatgacctattggatgggact
gtgacactgatctgtggagagactccatga
DBGET
integrated database retrieval system
