Leucoraja erinaceus (little skate): 129711668
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Entry
129711668 CDS
T09122
Symbol
usp48
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 48 isoform X1
KO
K11858
ubiquitin carboxyl-terminal hydrolase 48 [EC:
3.4.19.12
]
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
leri01002
]
129711668 (usp48)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
leri04121
]
129711668 (usp48)
Enzymes [BR:
leri01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
129711668 (usp48)
Peptidases and inhibitors [BR:
leri01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
129711668 (usp48)
Ubiquitin system [BR:
leri04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
129711668 (usp48)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
DUSP
ubiquitin
Usp-48
Actin_micro
DUF7627
Motif
Other DBs
NCBI-GeneID:
129711668
NCBI-ProteinID:
XP_055515456
LinkDB
All DBs
Position
30:complement(14109873..14200817)
Genome browser
AA seq
1055 aa
AA seq
DB search
MAPKQQLEKAAWQWAESIRPEEVQQEHIELAYRIRLGSCRRDARRRNCRGNPNCLVGLGE
HVWLGEIDENSFHNIDDPNSERRCKNTFVGLTNLGATCYVNTLLQVWFHNLELRQALYLC
HSPQKETGIGEGIEEDAEFEPQSICEHLQYLFALLQSSNRRYIDPSGFVKALGLDTGQQQ
DAQEFSKLFMSLLEDTLSKQNNPDVQNIIQQQFCGQYAYVTVCNQCGRESKLLSRFYELE
LNIQGHKQLTDCIDEFLKEEKLEGDNRYFCDECQDKQNATRKIKLLSLPRTLNLQLLRFV
FDRQTGHKKKLNSYISFPEVLDLTPYLERKDIGCVYELTAVLIHRGVSAYSGHYIAHVRD
DRTGDWYKFNDEEIEKMEGKKLQLGIEEDLAEPSKSQARKPKCIKGVHCSRNAYMLVYRR
KVEECKEKEISVQLPCVFHPFFSAHLQKMVERDNKKFEEWCMEMAEMRRQSVDKGKAKHE
EVQELFNMLPTKEGECYEFLPVDWLRKWLDDSAVTKPVDNSHHLCVHNRLIPDKICDVKR
ISQKAADIFYARYGGGPRLDASALCRDCVMEKCRILRLKNQLNEDYKIISNLTRITLQSH
EGYWVGKASLRSWRQLALEQLDGKDDDSDRTDGKSNGEGPNNLHAKGDDEMTGEKEEGED
LNFNEDLVCPHGDLCISETERRLVSDETWDRLKAYFPKSPAFIHYHSPCVQCQVLEKEGE
ENETLSKMMANEQKSALLCLFQDKNRPLLIKWPEETDVLYVVSQFFVEEWKKFIRKPTKC
SPVSSVGNNALLCPHGGLMFTAESMTKEDSKHVALIWPSEWEIIHKLFVVDNTIKVIQLM
KTGETGTVLLEYKTIPGLCGECREGLLCQQQRDLREYTQATIYIRKVVESVKVMKEGAPE
LNLSGSEAEEEREEGKVDGEKDPDFNQSNGAKRRKLAHPCIGSSSSTYYKQGIRRSTRHR
VRGEKELIVSANQTLKELKIQIMHAFSVAPFDQNLSLDGRMLTDDTATLGNLGVIPESVI
LLKADEPIADYTAMDDIMQVCMPEEGFKGTGLLGH
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atggcccccaagcagcagctggagaaggcggcctggcagtgggcggagagcatcaggccg
gaggaggtgcagcaggagcacatcgagctggcgtaccgtattcgcctagggtcctgccgg
agggacgcccgcagacgcaactgtaggggcaatcccaactgtttagtgggtcttggtgaa
catgtatggctgggggaaattgatgaaaatagcttccacaacattgatgaccccaattcg
gaaaggcgatgcaagaatacttttgtagggctaactaatcttggagctacttgttatgtc
aacaccctgcttcaggtttggtttcataaccttgaattgcgacaagcattgtatctctgt
catagtcctcaaaaggagacagggattggagaagggattgaggaagatgcagagtttgaa
ccacagtccatctgtgaacaccttcagtacttgtttgctttgctgcaaagcagtaataga
cgatatattgatccttctggatttgtaaaagcgttgggcctggatacgggacagcagcag
gatgcccaagaattttccaagctttttatgtcattattagaagatacattatcaaaacag
aacaatccagatgtacagaatattatccagcagcagttctgtggacagtatgcgtatgtc
acagtatgtaatcagtgtggccgtgagtctaagctgttatcccgtttttatgaactggag
ttaaatatccaaggacacaagcagctgacagattgcattgatgagtttctgaaggaagaa
aagttggaaggggacaataggtacttttgtgatgaatgtcaagataaacagaatgccacc
aggaaaattaaactactcagcctcccaagaacactcaatttacagcttttgaggtttgtc
tttgacaggcaaactggacataagaaaaaactaaactcctacatcagttttcctgaagtt
ttggacttaactccatatcttgaaaggaaagatattggctgtgtttatgagctaactgcg
gtgctgatccacagaggggtgagtgcatattccggccattacattgcacacgtacgagat
gacaggaccggcgactggtataaatttaatgatgaggagattgagaaaatggaagggaag
aagctgcagttggggatagaggaagaccttgcagagccttcaaaatcacaggcacgaaaa
cctaaatgtattaaaggtgtccattgttcaaggaatgcatatatgctggtgtacagacga
aaagtggaagagtgcaaagaaaaagaaataagtgttcaactcccatgtgttttccatccc
tttttttcagcacacttacagaaaatggttgaacgcgacaataaaaaatttgaagagtgg
tgcatggaaatggctgagatgaggaggcagagtgtggacaagggcaaagccaagcatgag
gaggtgcaagaactctttaacatgttaccaactaaagaaggagaatgctatgaatttcta
ccagtggactggctacgaaaatggttggatgattcagcggtaacaaagccagttgataat
tctcatcacttgtgtgtacataacagacttattcctgataaaatctgtgatgttaaaagg
atttctcagaaagcagctgatatcttctatgctagatatggaggtggccccagattagat
gcttctgctttatgtagagattgtgtcatggagaaatgtaggatacttagattaaagaat
caattaaatgaagattacaagattatctccaatctaaccagaatcacactacaaagccat
gaaggatactgggttggtaaagcttcgcttcgaagctggcgtcaactagcacttgaacag
ctggatggaaaggacgatgactctgatcgcacggatgggaaaagcaatggagaaggtcca
aacaatctgcatgccaaaggagatgatgaaatgacgggagagaaagaagaaggtgaagac
ttgaatttcaatgaagaccttgtttgtccgcatggtgacttatgtatatctgaaactgaa
agaagacttgtttccgatgaaacatgggatagactaaaggcgtatttccccaaatcaccc
gcgttcatacattatcattcaccatgtgtccagtgtcaggtgttagaaaaggaaggtgag
gagaacgagacgctgagcaaaatgatggcaaatgagcagaaatcagcacttctgtgtctt
tttcaagataaaaatagacctctcctcatcaagtggcctgaggagactgatgttctttat
gttgtttcccagttttttgttgaagaatggaagaagtttatcaggaagccaacgaaatgc
agtcctgtatcatctgtgggcaacaatgcacttctctgtccgcatggaggcctcatgttt
acagcagaatcaatgaccaaagaggattcgaaacatgtagctctgatatggccaagtgaa
tgggaaatcatccacaaattatttgttgttgataacacgattaaagtaattcaattgatg
aaaactggagagactggaacagtactattagaatataagaccattcctggcctgtgtgga
gaatgtagggaaggattactttgccaacagcagagggatttaagagagtatactcaggcc
acgatatatatccgtaaagtagtggagagtgtaaaggtgatgaaagaaggtgcaccagag
ctcaatctgagcggttctgaagctgaggaagaacgagaggaaggcaaagtggatggagag
aaggatcctgatttcaaccagagtaatggcgctaagcggcggaaactggcacacccttgt
attggcagtagcagtagcacgtactataaacaggggattcgacgtagtacacggcataga
gttcgaggggaaaaggagctcattgtgtcagccaatcaaactctcaaagagttaaaaata
cagatcatgcacgcgttttctgttgcaccgtttgaccagaacttgtcactggatggacgg
atgttaactgatgacacagcgacactaggcaaccttggggtcatcccagaatcagtgatt
ctattaaaggctgatgaaccaattgctgattatacagcaatggacgatataatgcaagtg
tgtatgcctgaagagggttttaaaggtactggtctattgggccactga
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