Leucoraja erinaceus (little skate): 129711710
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Entry
129711710 CDS
T09122
Symbol
ddx19a
Name
(RefSeq) ATP-dependent RNA helicase DDX19A isoform X1
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri03013
Nucleocytoplasmic transport
leri03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129711710 (ddx19a)
03015 mRNA surveillance pathway
129711710 (ddx19a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
leri03019
]
129711710 (ddx19a)
Enzymes [BR:
leri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
129711710 (ddx19a)
Messenger RNA biogenesis [BR:
leri03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
129711710 (ddx19a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Retrotran_gag_2
TYA
zf-CCHC_4
Motif
Other DBs
NCBI-GeneID:
129711710
NCBI-ProteinID:
XP_055515553
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All DBs
Position
30:17395130..17435264
Genome browser
AA seq
547 aa
AA seq
DB search
MSRRSTQSSSRWSRLVFDGDEKNYELWETKFLGYLRLQGLKDTILEEPTDNEEGDEAKNS
EAYAELIQFLDDKSLSLVMREAADDGRKALTILRDYYAGKGKPRVISLYTELTSLQKSSS
ESVTEYVIRAETAITALRNAGEVLSDRLLIAMILKGLPESFKPFAIHVTQSEQAMPFAEF
KTKLRSYEDMEKMRAAASDDNVMKARVQPSVRPDTTSTSAERADIVCFRCGLKGHKARAC
HRKQWCSHCKSTTHRDATCRRKQRRDDARQVSGEINNKEYAFLLGNLKLKEETSSAEPKE
ANVKQDPSDKVEKTNKPDKSGDNADVKPDEDDREDKAAQSLLNKLIRSNLVQSSHQVEVL
QRDPNSPLYSVKSFEELHLKKDLLQGVYGMGFNRPSKIQETALPMMLAEPPQNLIAQSQS
GTGKTAAFVLAMLSRVDLSQRHPQCLCLSPTYELALQTGQVIEQMGKFSPDIKLAYAVRG
NRLEKGQRISEQIVIGTPGTVMDWCTKLRFIDTKKIKVFVLDEADVMIATQGHQDQSIRI
QKCCLSH
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgagtagacggagcacccagtcgagtagccgctggtctcggctagtttttgacggagat
gaaaagaactatgagctgtgggagactaaatttttgggctatcttcggttacaagggcta
aaggatactatcttggaagagcctaccgacaatgaagaaggagacgaggccaaaaattca
gaggcatatgctgagctaatccagtttctggatgacaagagtttgtcgctggtaatgcga
gaagcagcagacgatgggcggaaagcgctaactattttgagagattattatgcgggtaag
ggaaagccacgtgtaataagcctgtatacagaactgacttcacttcaaaagtcgagcagc
gagagtgtaactgaatatgttattagggcagagacagccatcacagcattgagaaacgct
ggtgaggtattgagtgacagactgttaattgcaatgattctgaagggattgcctgaatct
ttcaaaccatttgctatccatgtcacgcaaagtgagcaggcaatgccttttgccgaattt
aaaactaaactacggagttatgaagatatggaaaagatgcgtgcagcagcatccgacgac
aatgtcatgaaggcacgtgtgcaaccgagtgtgagacccgacacgacaagtacaagtgcg
gagagagcggacattgtgtgcttcaggtgtggtctaaaaggacataaagccagagcatgt
catcgcaagcagtggtgtagtcactgtaaaagcaccacacaccgggacgcaacctgcaga
cggaaacagcggcgggacgacgcacgacaagtttccggggagattaacaacaaggaatat
gcattcctgctgggcaacctaaaactgaaagaggaaacttcgagtgctgaaccgaaggaa
gcaaatgtaaaacaagatccttcagataaagtggagaaaaccaataaaccagacaaaagt
ggtgataatgcagacgtcaagccggatgaagatgacagagaggacaaggctgcgcagtcc
ctgttgaataagctcatccgcagtaacctggttcaatcttcacaccaggttgaagtgctg
caaagagatccaaactcccctctctactcagtgaagtccttcgaagagctgcatttgaaa
aaagatcttctgcaaggcgtgtatggaatgggatttaatagaccttcgaagatccaggag
acggcattacccatgatgctggcagagcccccgcagaatctgattgctcagtctcagtcg
ggcaccgggaagacagctgcctttgttctggccatgctcagtcgagtggatctgtcccaa
aggcatccacagtgcttgtgcctttccccaacctatgagctggctttgcagactggacaa
gtgattgaacagatgggaaaattcagtcctgatatcaagttggcatacgctgtgcgagga
aatagacttgagaaaggccagaggatttcagaacagatcgttattggaacacccgggact
gtgatggactggtgtacaaagctgcggttcatagataccaagaagattaaagtttttgtc
ctggatgaagctgatgtcatgatcgccacccaaggacaccaagaccagagcattagaatt
cagaaatgctgcctgtcccactga
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