Leucoraja erinaceus (little skate): 129711960 Help Entry 129711960         CDS       T09122                                  Symbol setx Name (RefSeq) probable helicase senataxin   KO K10706   ATP-dependent RNA/DNA helicase, senataxin [EC:5.6.2.5 5.6.2.3] Organism leri  Leucoraja erinaceus (little skate) Brite KEGG Orthology (KO) [BR:leri00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:leri03021]     129711960 (setx) Enzymes [BR:leri01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      129711960 (setx)     5.6.2.5  RNA 5'-3' helicase      129711960 (setx) Transcription machinery [BR:leri03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      129711960 (setx) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  AAA_11 AAA_12 AAA_19 AAA_30 AAA_22 Viral_helicase1 NAT10_TcmA_helicase nSTAND3 AAA_16 AAA_7 RNA_helicase Motif Other DBs NCBI-GeneID:  129711960 NCBI-ProteinID:  XP_055515995 LinkDB All DBs Position 31:14313918..14398774 Genome browser AA seq 2864 aa AA seqDB search MSTCRWCTPQHQTTIEFLQSYSSEELLSQELKAANEDLCYCLECVVEYHRARDELPTAHK NLWKIETKRLVQHFEKTLKEEEEEEEGELFLIQDEQEIQLHGYMAADIENDLRVPIIEIL KYPYLLLHEHLSELFVEALSRIEQGNFSFQIFEKYAGIYLLLVHPNETIRKWAILAARSL GKVERDDFYDLQEVITCLLKVIELDLFENTDFYNSYGMQEGKLILLPSHLYDVTNHKNYW LGVCMLLLVLDEQAMDSLLLSHDKQNDFMKSILNTMMKSKPGDASDPFWPALQCFMVILD RLGSKVWGHLIDPTEAFQTIIRSQSYNSEIENIRNSSNNTKLKHDLDDDGDDVVSCSQIV YDYNSRKQSKDAGWKHTTCAEYYPSMFDEMQSLAHVLQCDIGQDMRVHNSTFLWFIPFVN SVMDLKDLGIAYIGEVVHHLHCEIKDVLNRKVNFCDKVSECLILILVSIIELHRNKNYLH LLWYSSHKWVEALVKCANLPARVFNLNTERTTGTNNFKVSSTAFAVTSSACSSITNSVQQ ACVQLIRSFLREGCQSQQRSIFQQFLDRLNLQLRSTFILGWQLSAREQQELQSCLTQLVK NAKFKTTEMKQLDTVGKGSGLKYPLIKREKEDTGEWGKMPGYCNSGPEPPCSTFQTDNGS SVIQKNIMNQEKMATCKGQENRLKESSPVGDFSYKAELSVSDDDTFLKTKTDEANDLKVE DEKEYLSLVLLSPPPQCSAFQTDNRSSVIQKNIMDQEKMATCKGQENQLKESSLVGDFPY KAELSVCDDDTFLKIKTDEANDLKVEDEKEYCSLVLNSSPPPSPPPPPLAEKITRTDLPS NQRHALEQTGELKHESVAVGSLLYDNLQTKSLEVTTSVHHKEKWKRSMLLEFQKSFNDDT VKPEATSTINDQNVPTGETCGPSAGVGYFPQKIGSVESASCKFKIDPSKLLNLKVKMRAI DIKRKMMKENNSLKEKELEEFPKVEVVNSQLDYMNNGNQNQNVNFSKKTIAGSTSTEQVT ASHLHLSPFFDKSEKLSKSDALRLSPLLQDKADSSTAIKVANHSYQVQECTSKISDGDDI PFSELRAKLKKWISLTRERNAVDSKMNKHHGNPLKVTAMKHSYLSSDLSEELDKIPTLNK IERRVKVCSHAQRCDSIQNKEKSKSDSSVEEFTIDEDAEDVSISNSQSTKDNTDVFEVEK PETQNLVGTTSVQETTDSTEKNDTCPLEMPTSSKPSPTLYEENDSQIFEFESEEQIHSVW GDIQPQHEKQKEKMATEKYVQDNGDEGDVNSMLNEWGYDTDYVPDDIIEKVAVEVEAQLE QEIMASKTDNEKQLLLGVKQMSSCSSAGGSASVSCSRLIFKSNCKLQKEKQKHCKIAVSN LNTFESLNLSDKSKRQLVAAKTVRDIQPEIKKARKITDKVDDKRIKNGIREKYLSQTSSR KGSNKFILTKKSTNGCQDQKVKKNRSKKTSEKSSSQTPLATTSNYTAKDMQVTHPSAKLS TSYPKKVRKHPEPTSTVEKLGLKKRSRKAFDLSQGSLDNLNKLRNYGQVIGTIENKHPKT AKLIVPQKLATIRNSHLLASQDLQYLRQSRSQRHHKDKKRRNTSEESAFLKGALSSTERQ DFSISVQTSRKLPSASVENTINSIAVTAASLERETDTNSTEGHVSSVNVSDCLNLTQHDP IDMDISADENLEDDDMLMLTQRDPIDMDIDSDTTKEEDNAKIPNSNVTDCQYRECTDVVS SERFGKNHAVSEPKDGIFAKPGLPQSDLKNSRPSTAKRFASSSTSRNAQLAIEMEVIPTR PAVAVSKVQQLQTPSSVKFAVPQTLRPIQPAKAMEPNVLRTQNKDVTFRPKSCLRTPGAE SCSTIAPLPPGQSRQASHSLNMADHHRRDESYLIKAVLKWTYQMFDMFDQFGAPDGLCDL PLREVPERFRSYEEYFSTFYPLLMINLFEQLAQKLMESKQTNKMIRNTLMLKSYSVNGRV NRAEFQATLQDNELLLQLYPKEDDIVFLWLPQHHNYYMQDDGEMQNEAHVAHVSRTSRFS GRDSQTTLYLTIHTRGNVSAVENQPVRCDVIGSIVTTTRQFKGLLFLAKIPLIRPIISAH SSFFTERNIMESTKWSNANEYNVNQQRAISMALSMVKQPRIPKVCLIQGPPGTGKSKTIV GLLHRLLNEDQENVKPSYSRNMRSKRTRILVCAPSNAAIDELMKKIIVEFKLKCKNVKNC LGNCGDVNLLRLGSEKTISTDVMGFSLDYQVNRRRKRSHHDADQVIQKQKDWLDRKLDEL GKQCAMIKKNREQIERAIQERKALERERAELGRKLKEVNRRSQDIQLNIILESHIICCTL STSGSMLLEMSFRKLGHEPFSCVIVDEAGQACETEILIPLMYHCPKLILVGDPEQLPPTI ISMKAKELNYGQSIMSRLQKCLQNEVNQNNFGHNPVQLLLTQYRMHPDICLFPSKYIYGN MLETDKKVEMERCRPNWPFQSYMLFDVTDGFECREKDSYTNPQEIKLVVALMSMIAEKQN GTCRNIGVITPYNAQKQGIINQIDQECKRTKLEINRTVQVGTVDGFQGCEKDCIIVSCVR ANSLQRSIGFLADRQRMNVTLTRARLSLFILGHLKTLMEDKDWNALIQDATKRGAIVKTC ERDYKKDCKKITKPRPAFCKTISDPCALSNERESAVAPVLKKSRSEDLSLKTAPGLLTDF SSAQIPQPAAWQQPYQGQSSVSVQPEASNTVALPPTSGRSERSAQSTYRDPRLARRAEAF IKEVQLCLQARHSLSKSTEVMPPGSTPSSSEHRTTHSSHTGQTAWNSAPRANYAPSPNSG LVSFTGTSAHGSGTGTVHRFSNSSGSSRYFHNGQETKDGYRQQK NT seq 8595 nt NT seq  +upstreamnt  +downstreamnt atgagtacttgtcgttggtgcacacctcaacaccagacaacaattgagtttctacaaagt tacagttctgaggagctcttgtcacaggagctaaaagctgccaatgaggatctttgctat tgtctggaatgcgtggtggaatatcaccgagcccgtgatgaacttccaacagcacacaag aatttatggaaaatcgagactaagcgtttggtacaacattttgaaaagaccctaaaagag gaagaggaagaggaagaaggtgaactgttcttaattcaggatgagcaggaaattcagctc catggatacatggcagcagacattgaaaatgaccttcgcgtccccatcattgagatcctt aaatacccttacttactccttcatgaacacctcagtgagttatttgttgaggccctcagc agaattgagcaggggaatttctcctttcagatatttgagaagtatgcaggaatctatcta cttttggtacacccaaatgaaacgatcaggaaatgggcaatccttgctgccagatctctt ggaaaggtggagcgagatgacttctatgacctgcaggaagtgataacctgtttattgaaa gtgattgaattggacctctttgaaaatacagatttttataatagttatggaatgcaagag ggaaagttaattcttttaccatcccatctttacgatgttaccaaccataagaactattgg ctcggtgtctgcatgctgttgctggtattggatgaacaagctatggactcattactactt tcccatgataaacagaatgacttcatgaagtccattctgaacaccatgatgaaaagcaaa ccaggtgatgcttctgatccattttggccagctctgcagtgtttcatggtaatccttgat cgacttggatcaaaagtctggggacacctcattgaccccactgaggcatttcagaccatt atcagaagccagagttacaacagcgaaattgaaaatattcgtaattcaagcaataataca aagttaaaacatgatctggatgatgacggtgatgatgtggtttcatgcagccagattgtg tacgactataactcaagaaagcaaagcaaggatgcaggatggaagcacacaacctgtgca gaatattacccaagcatgtttgatgaaatgcaaagtcttgcgcatgtactacagtgcgac attggacaagacatgcgtgtacacaacagtacatttctctggtttatcccatttgtcaat tctgtcatggacctaaaagatcttggcatagcctacattggtgaagtggttcaccacctc cactgtgagataaaagatgttctgaatcggaaagttaatttctgtgataaagtgtctgag tgcttaattcttatcttggtgtccatcatagaactacacagaaataaaaactatctgcac ttactttggtacagttcgcataaatgggtggaggcattggtgaaatgtgcaaatcttcct gccagagtgtttaacctaaacacagagagaacaacaggcacaaataactttaaggtctca tcgactgcatttgcagtaacatcttcagcatgttcttccattaccaattcagtacagcag gcatgtgttcaacttattcgtagttttctgagagaagggtgtcaatctcagcaaagaagc atatttcaacagttcctcgatagactgaatctgcagctgcgaagcacatttatccttggc tggcaattgagtgccagagaacagcaggaattacagtcatgtttaacacagttagttaaa aatgctaaatttaaaaccactgaaatgaaacaactggacacagtgggaaaaggaagtggg ctgaaatatcctttaatcaaacgtgaaaaagaggacacgggggaatggggaaagatgcct ggatattgtaacagtggtcctgagccaccgtgttcaacttttcaaacagacaatggaagt tcagttattcagaaaaatattatgaatcaagaaaaaatggctacttgcaaaggtcaagaa aaccggttaaaagaatcatctccggttggagatttttcgtataaagcagaattgtccgtg agtgacgacgatactttccttaagaccaaaaccgatgaagcaaatgatttgaaagttgaa gatgaaaaagaatatttgtcgttggtgctcctttctcctcctccacagtgttcagctttt caaacagacaatagaagttcagttattcagaaaaatatcatggatcaagaaaaaatggct acttgtaagggtcaagaaaaccagttgaaagaatcatctctggttggagattttccgtat aaagcagaattgtccgtgtgtgatgacgacactttccttaagatcaaaaccgatgaagca aatgatttgaaagttgaagatgaaaaagaatattgttcgttggtgctcaattcttctcct cctccttctcctcctcctcctcctctcgcagagaagatcaccaggactgacctaccaagc aatcagcggcatgcactggaacaaactggtgaactcaaacatgaatctgttgctgtggga tctttgctttatgataatttacagactaagtctcttgaagtgacaacaagtgttcaccac aaagaaaagtggaaacggtccatgttactcgagttccagaaatcgtttaatgatgataca gtaaagcccgaagccacctccaccataaacgaccaaaacgttcctactggagaaacatgt ggtccttcagcaggtgttggttattttcctcagaaaattggatcagttgagtctgcatca tgcaagtttaagattgatccaagcaaactacttaatctgaaagttaagatgcgggctatt gatattaaacggaagatgatgaaagaaaacaattctttgaaagaaaaggaattagaggaa tttccaaaagtagaagttgtcaatagtcaattagattatatgaataatggaaaccagaac cagaatgtcaatttcagcaaaaaaacaatagctggcagtactagtactgaacaagtgact gcctctcatcttcatttgtctccattttttgacaaaagtgagaagctctcaaaatctgat gctttaagacttagtcctttgttacaagataaagcagattcaagcactgccatcaaagtt gcaaaccattcatatcaagttcaagagtgtacaagcaagatcagtgatggtgatgatatt cctttcagtgaattaagggcaaaattgaagaaatggatttcgttaaccagagagagaaat gcagttgattcaaaaatgaataaacatcatggaaatcctttgaaagttactgctatgaag cattcttatttatccagtgacttgtctgaagagttagacaaaatcccaacattaaacaaa attgagagaagagtaaaagtttgctcccatgcacaacggtgtgattccatacagaataag gaaaaatctaaatctgattcatctgtggaagagtttacaattgatgaagatgctgaagat gtcagtatctctaattcacaatctacaaaggacaataccgatgtgttcgaagttgaaaaa cccgaaacacaaaatctagtaggtacaaccagtgtacaggagaccactgactccactgaa aaaaatgatacttgccccctagaaatgcctacatctagcaagccctcgccaactttgtat gaagaaaatgattcacagatttttgaatttgaaagtgaagagcagatacattctgtttgg ggagacattcagccgcaacatgagaaacaaaaagagaaaatggcaacagaaaagtatgta caagataatggtgatgaaggagatgttaatagcatgcttaatgaatgggggtatgataca gattatgtccctgacgatataattgaaaaggtggctgtagaggtagaagcacagttggaa caagaaataatggcaagtaaaactgacaatgagaaacaattattgcttggggtcaaacaa atgtcttcatgcagttctgcaggtggcagtgcatctgtttcatgttctaggttgattttt aaatctaattgcaaacttcaaaaagagaaacaaaaacactgtaagatcgcagtaagtaat ctaaatacctttgagtccctgaatttatctgataaaagtaaacggcagctggtagctgca aaaactgtgagagacattcagcctgaaataaagaaagcaagaaagattacagataaagtg gacgacaaaagaatcaaaaatggaataagagaaaaatatttatcccaaactagttccagg aaaggttcgaacaagttcattctgactaagaaatcaacaaatggttgtcaagaccaaaaa gttaagaaaaatagatcaaagaaaacctcagaaaaaagtagttctcaaacgccattggct actacttcgaactacactgccaaggatatgcaagtgacccatccttcagcaaaactctcc acctcttatccaaaaaaagtgcgtaaacaccccgaacctacttcaaccgttgaaaagctt gggctgaaaaagagatctcgtaaagcttttgacctttctcaaggaagcctcgataatctg aacaaattgcgtaattatgggcaagtaattggaaccattgagaacaaacatcctaagacg gcaaaactcattgtgccacaaaaattggcaacaattagaaattcacatttgctggcttcc caggaccttcagtatctacgacaatcgagatctcagcggcaccataaagacaagaagagg agaaatacatctgaagaaagtgctttccttaaaggagctctctcctctacggaaaggcaa gatttttctatttctgttcagacaagtcggaagctcccatctgcatcagtagaaaatacc attaactctattgcagttactgcagcttcactagaaagagaaactgatacaaattcaact gaggggcatgtgtcaagtgttaatgtaagtgattgcttaaatttaacacaacatgaccct atcgatatggatattagtgcagatgaaaacctggaagatgatgatatgttaatgttgaca cagagggatcctatagatatggatatagatagtgataccacaaaagaagaggacaatgca aaaatacccaattccaatgtgactgattgccagtatagagaatgcactgatgttgtatct tcagaaaggtttggcaaaaaccatgctgtatctgaacccaaagatggcatctttgctaaa ccaggattacctcaatctgacctgaaaaactcaagaccctctactgccaaacgctttgct tcaagctctacttcacgtaatgctcagcttgctattgaaatggaggttatcccaactcgt ccagctgtggcagtttctaaagtgcagcaacttcagacaccttcatcagtaaagtttgct gtgccacagacattaagaccaatccaacctgcaaaagctatggaacctaatgtccttcga acacaaaacaaagacgtgactttcagaccaaagtcttgtttgcgtacacctggtgcagaa tcgtgctctacgattgcacctttgccacctgggcaatccaggcaagcttctcattccttg aatatggcagatcatcatcggcgggacgaatcttacttgatcaaagctgttcttaaatgg acctatcagatgtttgacatgttcgaccaatttggggcacctgatgggctttgtgacctt ccactacgagaggtgcctgaaaggtttagatcatatgaagaatattttagcaccttttac cctttactgatgataaatctgtttgaacagctagctcagaaattgatggaatccaagcag acaaataaaatgattcggaacactctgatgctgaagagttactctgtaaatggccgagta aaccgtgcagaatttcaagccacactgcaggataacgaacttttgttgcaactatatcca aaagaagatgatattgtgtttctctggttgccacaacatcacaattactacatgcaagat gacggtgagatgcagaatgaagcacatgttgcacatgtctcaaggacgtcacgtttctcg ggacgtgattcacaaactactctttaccttacaatccacacgagagggaatgttagtgca gtggaaaaccaacctgtgagatgcgatgtcattggatccattgtgacaaccacacggcag ttcaaaggattgctctttctggctaagatccctctgattcggccaattatttcggcccac tcctcattctttactgaacgaaacatcatggagagtacaaagtggagtaatgctaatgaa tacaatgtgaatcagcagagagcaattagcatggcattgtcgatggttaaacagccaaga attcctaaagtctgcctcatccaagggccacctggaacaggaaagtcgaaaaccattgtt gggctcctgcatcgtttgcttaatgaggatcaagagaatgttaaaccatcttacagcagg aacatgagaagtaaacgcaccaggattcttgtctgtgctccatcgaatgcagctattgat gagctcatgaaaaaaataattgttgagtttaaactgaaatgcaaaaatgtgaagaattgc ttgggaaattgtggcgatgtgaatctattaagactagggtctgagaaaactatctcaact gatgtcatgggattcagtttggattatcaagtaaatcgtagaaggaaaaggagccatcat gatgctgatcaggtcattcagaaacagaaggattggttggataggaagttggatgaactt ggaaagcaatgtgccatgataaaaaaaaacagagagcagattgaacgggcaattcaagag cggaaagctttggagagggagagggcggaacttggacgcaaactaaaggaggttaataga cgatcccaggacattcagctgaacattattctggaatcgcacatcatctgctgcactttg agtaccagtggcagtatgcttttggaaatgtcattccgaaaattgggtcatgaaccgttt agctgtgtgattgtggatgaggctggacaggcatgtgaaactgaaatactgattccattg atgtatcattgtcccaaattaattcttgtgggagatcctgagcaactgccaccaactatt atttccatgaaagcaaaagagttaaactatggccaatcaattatgagccggttgcaaaag tgcctgcaaaatgaagtaaatcagaacaactttggacataacccagtgcaattgctgttg acccagtacaggatgcatcctgacatctgcctgtttccctccaagtacatatatggaaat atgttggaaactgataaaaaagtagagatggagcggtgtcggccaaactggcctttccaa tcatacatgttgtttgatgtgacagatggatttgaatgcagggagaaagactcttataca aacccacaggaaattaaactggtggtagctttaatgagtatgattgcagagaaacaaaat ggaacatgtcgtaacattggagtgatcacaccgtacaatgcacagaaacagggaattatc aatcaaattgatcaagaatgtaaaagaactaagcttgaaattaacagaacggtgcaagtt ggcacagtggatggattccaaggatgtgaaaaggattgcattattgttagctgtgttagg gcaaacagtcttcaaagatccattgggttcttagcagatcggcagcgaatgaatgttaca ctaacccgtgctcgtttaagtctcttcattctgggacatttgaagacacttatggaagac aaagattggaatgctttgatacaggatgcgacgaaaaggggagccattgtgaagacgtgt gaaagggattacaagaaggactgtaaaaaaatcacaaaaccaagacctgctttctgcaaa accatttctgatccatgtgcactgtcaaatgagagggaatctgctgttgctcctgttcta aaaaaatccaggagtgaagatttaagcttgaaaacagcgcctggtctgttaactgacttc agcagtgcacagattccccaaccagcagcatggcagcagccatatcagggtcaatcttcg gttagtgtacagcctgaggcgtcaaacactgttgcactgcctccaacatccggtagatca gagcgatcggctcagtccacgtacagggatccgagattggcccgacgggcagaagctttc atcaaggaggttcagctatgtttacaagccagacactctctttcaaaatctactgaagtg atgccgccaggttcaactccatccagtagtgaacatcggacaacacattcttcacacact ggacagactgcatggaattctgctcccagagccaattatgctccttctcccaactctggc ttggtctcttttactgggacctctgcgcatggcagtggtacgggtacagtgcacaggttc agcaactcttcaggttctagcagatactttcataatggacaggagacaaaggatggatat agacagcaaaagtga

DBGET integrated database retrieval system