Leucoraja erinaceus (little skate): 129712056
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Entry
129712056 CDS
T09122
Symbol
gle1
Name
(RefSeq) mRNA export factor GLE1 isoform X1
KO
K18723
nucleoporin GLE1
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri03013
Nucleocytoplasmic transport
leri03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129712056 (gle1)
03015 mRNA surveillance pathway
129712056 (gle1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
leri03019
]
129712056 (gle1)
Messenger RNA biogenesis [BR:
leri03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
129712056 (gle1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GLE1
DASH_Dad3
Motif
Other DBs
NCBI-GeneID:
129712056
NCBI-ProteinID:
XP_055516187
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All DBs
Position
31:19935026..19972384
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AA seq
675 aa
AA seq
DB search
MPAEDKRWETLQALRNSKKGRLTYDTSWLEDGEDILEQCQSSPKLSVNSAWVLDHLSRPE
TQSGNDQLPEKSVPSPDPRTEEENNNNVQQLDEELTPERAFLLLSPEATQIEGYVKMYET
VHKIKGQAELKHRQELQQKIVHDLSTSSTEQMKRFEESLELKQRQEYEEMRDMMEKGSLE
ARGRQEKLKEEHRRKAKNMNLKLREAEQQRIRQKELEHQRQAESRDRLRKLNAIQAEVLH
LNMQIEPYLKQKDLVGLDLSEYSNRGNQLCSLVSGVIKLTSEGGLLQQEEMLNAERALLQ
MRTLIAAMHEKIAAVAAEKKRVKEEEEKALQKKQEVKTEVAPPAPQQKPTHKEGLQLKAD
SSTLQWYQRLQDICNQCAASINDLNNSKDSKVKKIKMDLQKTATIPVGQISSVAASHLRE
IFDKINNLLLGKQISSGGKLVSISQHPQGQEFVYYKLAEKFVKQGEEEVASHHEAAFPIA
VVASGIWESHPKVGDIFLAHLHRKCPYAVPFFPSWKDGLPKEEYQRLLGYRVQENCVEQQ
DNFLKRMSGMVRLYAAIIVSRWPYGTKQGEHPHDLNHAWRWLAQMLNMEPLADVTATLLF
DFLEVCGHALMLKYQNQFWKMIRLIMTEYFPRIEAVTGNGQVGAVIRLRQFLEKSLKQKD
FPLPKGYLKPAFWKS
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcagaggataaacgctgggagactttgcaggcgttgcgcaactcgaagaaaggg
cggctgacctacgacacgagctggctggaggacggggaggatattttggaacaatgccaa
tcatcacccaagctttctgtaaactcagcatgggtactggaccacttgtcacgacccgaa
actcagtctggaaacgaccaattaccagagaagtctgttccttctccagatccaagaaca
gaagaggaaaataataacaatgtgcagcagttggatgaggaattgactccagaacgcgca
tttctgctgctttctcctgaagcaactcagattgaaggctatgttaaaatgtatgagaca
gtccacaaaattaagggccaggctgaactgaagcatcgccaggaacttcaacagaaaatt
gttcatgatctctcgacatcatctactgaacaaatgaaacgatttgaagaatccctggag
cttaagcaacggcaggaatatgaggagatgcgtgacatgatggagaaaggatctcttgaa
gctcgaggacgtcaagaaaagttaaaagaagaacaccggcgtaaagctaagaatatgaac
ctgaaactacgagaagccgagcagcagcggatacggcagaaggagttggagcatcagagg
caagcagaaagccgagatcgactgcgcaagttgaatgctatccaggcagaagtgttacat
ctgaatatgcagatcgagccctacttgaaacagaaggaccttgtgggactggacctctcg
gaatacagtaatcgtggcaatcaactttgcagcctggtgtcaggagttattaagctcaca
tcagagggtggcttgctacaacaagaggaaatgctgaatgcagagcgagccctgctgcaa
atgagaacgctgatagccgctatgcatgagaaaattgctgctgtagcagcagagaagaag
agggtaaaagaagaagaggagaaagcacttcagaaaaaacaagaagtcaaaactgaagta
gcaccaccagctcctcaacagaagcccactcataaagaagggctacaattaaaggcagat
tcaagcactttgcaatggtatcaacggttgcaggatatctgtaatcaatgtgcagcatcc
attaatgatcttaacaacagcaaggatagtaaggttaagaagattaaaatggatcttcag
aagacagcaactattcccgttggtcaaatctcttctgtcgcagcatctcacctgcgtgaa
atctttgacaagatcaataacctcctcctaggcaagcaaatatcatcaggtgggaagttg
gtgtcgatttctcaacacccacaaggtcaggagtttgtctattacaaactggcagaaaaa
tttgtgaaacaaggggaggaggaggttgcatctcaccatgaagctgcatttccaatagca
gtggttgcttcagggatctgggagtctcacccgaaggttggcgatattttcttggctcac
ttgcaccgaaagtgtccctatgcagtcccgtttttcccttcatggaaagatgggttacca
aaggaagaataccaaaggttattggggtacagagtgcaggaaaattgtgttgagcagcag
gacaactttctgaaacggatgtctggaatggttcgtctgtatgcagccatcatagtgtca
agatggccctatggaacaaagcaaggggaacatccacatgacctgaatcatgcttggcgc
tggttagctcagatgttaaacatggaaccattggctgacgtgactgctacactactcttt
gacttcttggaggtctgtggccatgctttgatgttaaagtaccagaatcagttctggaaa
atgatccgactaatcatgactgaatatttccccaggattgaagctgttacaggcaatggt
caagttggggccgtaatccgattgcgccaattcctcgagaaaagcttgaaacaaaaagat
tttcctttaccgaagggctacctaaaacctgcattctggaagtcgtga
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