Leucoraja erinaceus (little skate): 129712057
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Entry
129712057 CDS
T09122
Symbol
sptan1
Name
(RefSeq) spectrin alpha chain, non-erythrocytic 1 isoform X1
KO
K06114
spectrin alpha, non-erythrocytic (fodrin)
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri04210
Apoptosis
leri04517
IgSF CAM signaling
leri04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
129712057 (sptan1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
129712057 (sptan1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
129712057 (sptan1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
leri04812
]
129712057 (sptan1)
Cytoskeleton proteins [BR:
leri04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
129712057 (sptan1)
Intermediate filaments
Intermediate filament-binding proteins
129712057 (sptan1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
EFhand_Ca_insen
SH3_1
EF-hand_1
EF-hand_7
EF-hand_6
SH3_9
EF-hand_8
EF-hand_5
SH3_2
SH3_3
EF-hand_FSTL1
SH3_10
Spectrin_3
Motif
Other DBs
NCBI-GeneID:
129712057
NCBI-ProteinID:
XP_055516189
LinkDB
All DBs
Position
31:19976847..20052336
Genome browser
AA seq
2512 aa
AA seq
DB search
MSSFRKTKLQKMDSTGVKILDSADDIQERRHQVLDRYQRFKELSILRRQKLEDSFSFQCF
RRDADELEKWIQEKLQIASDENYKDPSNLQGKLQKHQAFEAEVQANATAIIKLDEFGNKM
ITNEHFATEIIRTRLEELHQLWARLLEKMREKGIRLLQTQKLVQYQRECDDVMDWINDKE
AFVTSEEVGQDLEHVEVLQKKFEEFQTDLAAHEERVNEVNQLAGKLEQENHPELTLITHR
QDEVNVAWQRLKGLVLQRQGKLFGAAEVQRFNRDVDETISWIKEKEQLMASDDFGRDLAS
VQTLLRKHEGLERDLAALEDKVKALTSEADRLQQSHPQNAAQIQVKQEELIQNWERIRTL
AAQRHTRLDDSYRLQRFLADFRDLTSWVTEMKALISADELANDVAGAEALLDRHQEHKGE
IDAHEDSFKTTDEAGQALLAGEHYASDEVREKLGILAEEKVSLLDLWELRRHQYEQCMDL
QLFYRDTEQVDNWMSKQEAFLLNEDLGDSLDSVEALLKKHEDFEKSLGAQEEKITALEEF
ATKLIQSDHYAKEDVAARRDALLSRRNALHERAMYRRVVLENSFSLQQFFRDSDELKSWI
NEKMKTATDEAHKDPSNLQGKVQKHQAFEAELSANQSRIDTLQKAGQELIDANHYASDEV
SARMNEVISLWKRLLEATEMKGIKLREANQQQQFNRNVEDIELWLYEVEGHLSSDDYGKD
LTSVQNLQKKHALLEADIAAHQDRIDGINIQARQFQEAGHFDADNIKKKQETLVSRYEAL
KDPMVSRKQKLADSLRLQQLFRDIEDEETWIREKEPIAASTNRGKDLIGVQNLLKKHQAL
QAEISGHEPRIKAVAQKGQAMIEDGHFASEEVNTKLNDLNQKWDSLKAKAAQRRQDLEDS
LQAQQYFADANEAESWMREKEPVVGSIDYGKDEDSAEALLKKHEALMSDLIAYGSSIQAL
KEQAQGCRQQVAPSDDETGKELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVEV
NDRQGFVPAAYVKKLDPAQSASRENLLEDSSSIAIRQEQIENQALLAKEVGSVVLRMKQV
EELYQSILELGTKRKDMLEKSCKKFMLFREANELQQWINEKETALTSEEVGTDLEQVEVL
QKKFDDFQKDLKANESRLQDINKVANDLESEGLMVEEVQVAQEQSVLSSAPVVVKDESDS
KTASPWKSARLMIQAVTNFNAIKELNEQWKSLQQLAEERSQVLGSAHEVQRFHRDADETK
EWIEEKNQALNTDNYGHDLASVQALQRKHEGFERDLAALGDKVNSLGETANRLIQSHPES
VEDVQEKCTELNQAWTNLVERADQRKGKLNDSHDLQRFLSDFRDLMSWINGIRGLVSSEE
LAKDVTGAEALLERHQEHRTEIDARAGTFQAFEQFGHQLLARGHYACPEIREKLDILEHE
RADLEKAWIQRRMMLDQCLELQLFNRDCEQAENWMAAREAFLASDDKGDSLDSVEALIKK
HEDFDKAITVQEEKIAALQAFADQLIGSEHYAKGDISKRRNEVLDRWRRLKAQMIEKRSK
LGESQTLQQFSRDVDEIEAWISEKLQTATDESYKDPTNIQLSKLLSKHQKHQAFEAELHA
NADRIRGVIDMGKSLIDRGACAGSEDAVQARLGTLGNQWGDLVQKSAEKSQKLKEANKQQ
NFNTGIKDFDFWLSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLNLQA
DSLMSSDAFDTTQVKDKRTAVNSRFQKIKNMATTRRANLNESHRLHQFFRDLDDEESWLK
EKKLLVSSEDYGRDLTGVQNLKKKHKRLEAELAAHDPAIQSVLETGNKLSDDNTIGKDEI
QQRLSQFVAHWKELKEFAAARGQRLEESLEYQQFVANVEEEEAWINEKLNLVASEDYGDT
LAAVQGLLKKHEAFETDFTVHRDRVHDVCTSGEELVKKNNHYVENITAKLKGLEAKVTEL
EKAAAQRKAKLDENSAFLQFNWKADVVESWIGEKENSLKTDDYGRDLSSVQTLLTKQETF
DAGLQAFQQEGITNITALKDQLLAAKHIQSKAIEARHASLMKRWNQLLANSGERKKKLLE
AQEHFRKLEDLFLTFAKKASAFNSWFENAEEDLTDPVRCNSLEEIKALREAHEAFRSSLS
SAQTDFNQLAELDRQIKSYRMFSNPYTWFTMEALEETWRNLQKIIKEREMELQKEQRRQE
ENDKLRQEFAQHANTFHQWLQETRTYLLDGIAYRRVIHVYQYEVGDDLAGRSCMVEESGT
LESQLEATKRKHQEIRAMRSQLKKIEDLGAAMEEALILDNKYTEHSTVGLAQQWDQLDQL
GMRMQHNLEQQIQARNTTGVTEEALKEFSMMFKHFDKDKSGRLNHQEFKSCLRSLGYDLP
MVEEGEPDSEFEAILNAVDPNRDGYVSLQEYMAFMISRETENVKSSEEIESAFRALSSEG
KQFVTREELYQNLSREQADYCLSHMKPYTDSKGREIPSAFDYVEFTRSLFVN
NT seq
7539 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcattccgtaaaaccaaactgcagaaaatggattccactggagtaaagattcta
gattcagcagatgacatccaagaaagacgccaccaggtgctagataggtaccagcggttc
aaggaactttctattttgcgaaggcagaagctagaagattctttcagttttcagtgtttc
cgccgtgatgcagatgaattggagaaatggattcaagagaaacttcaaattgcatctgat
gaaaattataaggatcccagcaatctgcagggtaagctgcagaaacatcaggcattcgag
gctgaagtgcaggctaatgctactgccatcatcaaacttgatgaatttggtaacaagatg
attacaaatgagcattttgccacagaaattattcgaacccgactggaggagcttcatcaa
ctatgggcgcgcctgctggagaaaatgagggagaaggggattcgacttctgcagacgcag
aagctggtgcagtatcagcgagagtgtgatgatgtcatggactggatcaatgataaggag
gcttttgtcacatcagaggaagttggccaggatttggagcatgtggaggttttgcagaag
aaatttgaggaattccaaactgaccttgcagctcacgaggagcgtgttaatgaagttaat
caacttgctggaaaactggaacaggagaatcatcctgagctgacacttatcacccatcgt
caggatgaggtcaatgttgcttggcaacgactcaaaggcctggtactacaacggcaagga
aaactttttggagctgcagaagtacagcgttttaatagagatgtggatgaaaccattagt
tggattaaagagaaagaacagctaatggcttcggatgattttggacgtgatctggccagt
gtgcaaacacttcttcgtaagcatgaaggcttggagagagatctagcagctctggaggat
aaggtgaaggcactcacctctgaggcagatcgcctgcaacagtcacacccacagaacgca
gcccagattcaggtcaaacaagaagagcttattcaaaattgggagcgaatccgcacctta
gcagcgcaaaggcatacccgtctggatgattcatacaggctgcaacgtttcctagcagat
ttccgtgacctgacaagctgggtgactgaaatgaaggcgctcatcagtgctgacgaattg
gcgaatgacgtggctggagcagaggcattacttgatagacatcaggaacataagggtgaa
attgatgctcatgaagacagcttcaagacaacagatgaagcaggacaagccttgcttgct
ggtgagcactacgcatctgatgaggtccgagagaagctgggaattcttgctgaggagaaa
gtttctcttctcgacctgtgggagctccgtagacaccaatacgagcaatgcatggatctg
cagctcttctaccgtgacactgagcaggtggataactggatgagcaaacaggaggctttc
ttgttgaatgaagatttgggagattcacttgatagtgtagaagcactcctgaaaaagcat
gaagattttgagaagtcccttggtgctcaagaagagaaaattacggcattggaagaattt
gctaccaagttgattcagagtgatcactacgctaaggaagatgttgcagctcgtcgtgat
gcgctgctgagccgtaggaatgctctccatgagcgtgccatgtatcggcgtgtggtgttg
gagaactccttcagtctgcagcagtttttccgtgactcggatgagttgaagagttggata
aatgaaaagatgaaaactgccaccgatgaagctcataaggatccttccaatttgcaagga
aaggttcaaaaacaccaggcttttgaggccgaactttcagccaaccagagccgcattgac
actctgcagaaagctggccaggaactgattgatgctaaccactacgcctcagatgaagtg
tctgctcggatgaatgaagtcatctccctgtggaaaaggctgctcgaggccacagaaatg
aaagggattaaactacgtgaagccaaccagcagcaacaatttaaccggaatgtggaagac
attgaactatggttgtatgaagttgaaggtcacctttcttcagatgattatggaaaggat
ctgaccagcgtgcagaacctgcagaaaaaacacgcactgctggaggctgatattgcagca
caccaggaccgtattgatgggattaatatccaagcccggcagttccaggaagcaggacat
tttgatgccgataacatcaagaaaaagcaagaaactttagttagtcgttatgaggcattg
aaagacccaatggtgtcccgaaaacagaaacttgctgattctctccgacttcaacaactt
ttccgtgatattgaagatgaagaaacatggattcgagaaaaggagcccattgctgcttcc
acaaatagaggaaaggatttgattggcgtacagaacttgcttaaaaagcaccaggcgctc
caggctgagatttctggtcatgaaccacgtattaaagcagtggctcagaaaggccaagcc
atgattgaagacggtcactttgcgagtgaagaggtaaacaccaagctaaatgacctgaat
caaaaatgggattccttgaaagccaaggctgcacagaggcgtcaggatttggaagattcg
ctacaggctcagcaatactttgctgatgctaatgaagcagagtcttggatgagggagaaa
gaaccagttgttggcagcatcgactatggaaaagatgaagattctgctgaggccttattg
aagaagcatgaagctctgatgtctgatctaattgcatatggaagcagcattcaagcattg
aaggaacaggctcaaggctgtcgtcaacaagtagctccctcagatgatgaaactgggaaa
gaactggttctggcactgtatgattaccaggagaagagtcctcgtgaagtaaccatgaaa
aagggtgatattcttaccctgctaaacagtactaataaggattggtggaaagtggaagtg
aatgatcgtcagggatttgttcctgctgcctacgttaagaaattggacccggcgcagagt
gcatcacgtgagaatttactggaggattcaagtagcattgcaatacgtcaggaacagata
gaaaaccaggctctgctagctaaggaggttggcagcgttgtgctccgtatgaagcaggtg
gaagaattataccagtcgattctggaactgggcacgaagcgcaaggatatgctggaaaag
agctgcaaaaagttcatgcttttccgtgaggccaatgaactgcagcagtggataaacgag
aaggagacagcattgaccagtgaagaggtggggactgacctagaacaagtggaagtactg
cagaagaaatttgatgacttccagaaagatttgaaagccaatgaatctcgcttgcaagat
attaacaaggtggcaaatgatttggagtcagagggtctgatggttgaagaagtacaagta
gctcaggaacaatctgttctatcatctgctcctgtggttgttaaggatgaatctgattca
aaaactgcatcgccatggaagtctgcgcgactgatgatacaagcggtgactaactttaat
gccatcaaggaactgaatgaacaatggaagtccctacaacagctggctgaggaacgcagc
caggtcttgggaagtgcacacgaggtacagagattccacagagatgctgatgaaaccaag
gaatggatcgaagagaaaaatcaagctttgaacactgataattatggacatgaccttgca
agtgttcaggccctgcagcgcaaacatgagggatttgaacgggaccttgctgctctggga
gataaagtgaattctctgggagaaactgcaaaccgattgattcaatctcatcctgagtca
gttgaggatgtccaagaaaaatgcacagaactgaatcaggcctggactaacctggtggag
cgtgctgaccagcgtaaaggaaaattgaatgattctcatgacttacagcgtttcttgagt
gatttcagggatcttatgtcctggatcaatggaatccgaggattggtgtcttctgaggaa
cttgccaaggatgtaacaggagcagaggcccttttggaacgacaccaggaacaccgtact
gagattgatgccagggcaggcacattccaggcatttgaacagttcggacatcagctcttg
gctcgtgggcactatgcttgtcctgaaattagggagaaactggatatcctggagcatgag
cgtgcagatttggagaaagcctggatccagcgcagaatgatgttggatcagtgtctggag
ttgcagctgtttaaccgtgactgtgagcaagctgagaattggatggcagcacgtgaggca
ttcttagccagtgacgacaaaggtgattccctggacagtgtggaagccctcatcaagaaa
catgaagattttgataaagctattactgtgcaggaggagaaaattgcagcactgcaagct
tttgctgaccagctgatcggctcagaacattatgcaaagggagatatttcaaaacgtcgc
aatgaggtattagataggtggcgccgcttgaaagctcagatgattgagaaaaggtcaaag
cttggggaatcacagacccttcagcaatttagccgagatgtcgatgaaatcgaggcctgg
atcagtgagaagcttcagacggcaactgatgaatcttacaaagatcccacaaacattcag
ctatccaaactgctgagcaaacaccagaagcatcaagcatttgaagcagagcttcatgcc
aatgccgacagaatccgtggggtcattgacatggggaaatcgctgattgaccgaggggct
tgtgctggtagtgaagatgctgtccaggctcgtttgggaacgctgggtaaccaatggggg
gatttggtgcagaaatcagcagaaaaaagtcagaagctgaaagaggccaataagcagcaa
aatttcaacactggaatcaaagactttgacttctggctatctgaggtggaagctctacta
gcctctgaggactatgggaaggacctggcatctgtaaataacctactgaagaaacatcag
cttctcgaagctgacattagcgcgcatgaggaccgtctgaaagacttgaatcttcaggct
gatagcctcatgtccagtgatgcctttgacaccacccaagtaaaggacaaacgcactgcg
gtgaacagtcggtttcaaaaaataaaaaatatggccacaactcgtcgtgctaacctgaat
gaatcacatagacttcaccaattcttccgtgatttggatgacgaagaatcttggttaaag
gagaagaaattgcttgtgagttctgaagattacggacgggatctgactggagtacagaac
ttgaagaagaagcataaacgcctggaagcagagctggctgcacatgacccagcaatccag
tctgtactggaaacgggaaataagttgtcggatgataatacgattggaaaggatgaaatc
cagcagagactgtcacagtttgtggcacactggaaggagttgaaggaatttgcagctgcc
cgaggacaacgtctggaagaatccttggaataccagcagtttgtggcaaatgttgaggaa
gaggaggcatggatcaatgagaagttgaacttggtggcaagcgaggattatggagataca
cttgctgctgtacagggattgttgaaaaaacatgaagcatttgaaactgatttcacagtt
caccgtgatcgagtgcatgatgtttgtacaagtggtgaggagttggtaaagaagaacaat
cattatgttgagaatataactgcaaagttgaagggattggaagcgaaggtgacagagttg
gagaaagcagctgcccagaggaaagcgaagctggatgagaattctgcattcttgcagttt
aattggaaggcggatgtggttgagtcgtggatcggtgagaaagaaaacagtttgaagaca
gatgattatggccgtgatctctcctctgtacaaacgttgctgactaagcaggaaacattt
gatgctggactgcaagctttccaacaggaggggattactaacattacagctctgaaggat
cagttactggcagctaaacacattcagtccaaagccattgaagcacgtcatgcttcatta
atgaaaaggtggaatcagctgttggccaattcaggtgaaagaaagaagaaactacttgaa
gcccaggaacatttcagaaaacttgaagatctcttcttgacctttgctaagaaagcttca
gcctttaacagttggtttgagaatgccgaggaggacctcacagatcctgtgcgatgcaac
tcactggaggagataaaggccctgcgtgaggctcacgaggctttccgctcgtctttgagc
tcagcccagaccgatttcaaccagctggctgagcttgatcgtcagatcaagagttaccgg
atgttttctaatccctacacctggttcactatggaagccctggaggagacttggagaaac
ttgcagaaaatcataaaggaacgagagatggaattgcagaaggaacagagacgccaagaa
gagaatgataaattacgtcaggagtttgcccaacatgcaaatacattccaccagtggctg
caggaaacaaggacatacctactggatggcatagcgtaccgtcgtgtcattcatgtctat
cagtatgaagttggggatgatctggctggaaggtcttgcatggtggaggaatcgggaaca
ctggagtcacagctggaggcaaccaagagaaagcatcaggagattcgagcaatgagaagt
caattgaaaaagattgaggacctaggagcagcaatggaggaagcattgatcttagataat
aagtacacggagcacagcactgtggggttggcacagcaatgggaccaattggatcaactg
ggcatgagaatgcaacataacctggaacaacaaatacaggccaggaacactaccggtgta
acagaggaagctcttaaagaattcagcatgatgttcaagcattttgacaaggacaaatct
ggacgactgaatcatcaggaatttaaatcatgcttgcgctccctgggttatgatttgccg
atggtagaggaaggagaaccagactctgagtttgaagctatattgaatgccgttgatccc
aaccgagatggatacgtttcactacaggaatacatggcctttatgatcagcagagaaacg
gagaacgttaagtctagtgaagaaattgagagtgctttccgtgccctcagctcagaagga
aaacaatttgtcacacgtgaagaattgtatcagaacctgtccagggagcaggccgattat
tgcctctcgcacatgaagccgtatacagatagcaaaggcagagagattccttcggccttc
gactatgtggaattcacacgatcgctgtttgtgaactaa
DBGET
integrated database retrieval system
