Leucoraja erinaceus (little skate): 129712060
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Entry
129712060 CDS
T09122
Symbol
myo5b
Name
(RefSeq) unconventional myosin-Vb
KO
K10357
myosin V
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
129712060 (myo5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
leri03019
]
129712060 (myo5b)
04131 Membrane trafficking [BR:
leri04131
]
129712060 (myo5b)
03029 Mitochondrial biogenesis [BR:
leri03029
]
129712060 (myo5b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
leri04812
]
129712060 (myo5b)
Messenger RNA biogenesis [BR:
leri03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
129712060 (myo5b)
mRNA cycle factors
P-body specific factors
129712060 (myo5b)
Membrane trafficking [BR:
leri04131
]
Others
Actin-binding proteins
Myosins
129712060 (myo5b)
Mitochondrial biogenesis [BR:
leri03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
129712060 (myo5b)
Cytoskeleton proteins [BR:
leri04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
129712060 (myo5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
Myo5a
DIL
IQ
Myosin_N
AAA_16
AAA_22
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
129712060
NCBI-ProteinID:
XP_055516239
LinkDB
All DBs
Position
1:complement(18466364..18711353)
Genome browser
AA seq
1821 aa
AA seq
DB search
MSVSELYTKYTKVWIPDPEDVWKSAEIVQNYKEGDEILHLKLEDEMPVEHPVNSKTSQLP
FLRNPDILVGENDLTALSYLHEPAVLHNLKVRFIESNAIYTYCGIVLVAINPYEQLPIYG
EDVIQAYSGQNMGDMDPHIFAVAEEAYKQMARDEKNQSIIVSGESGAGKTVSAKYAMRYF
ATVGGSASETNVEEKVLASSPIMEAIGNAKTTRNDNSSRFGKYIQIGFDRRYYIIGANMR
TYLLEKSRVVFQAEDERNYHIFYQLCASADRPEFKELCLSSAENYFYTTRGGGILIDGVD
DAEDFNRTCKAFTLLGVKEANQMKIYRVIASILHLGNVEIVSERDVDTCGIAKEDEHLNY
FCNLLGVEHDQMEHWLCHRKLITTSETFIKTMAKQQAINAKNALAKHIYAQLFNWIVEQI
NKALYTTSKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNLHVFKLEQEEYMK
EQIPWTLIDFSDNQPCIDLIEAKLGILDLLDEECRMPKGTDQSWAQKLYERLSSSRHFQK
PRMSNMAYVVIHFADKVEYQCDGFLEKNRDTVYEEQINILKASKYQLVADLFQDEDSSAS
IAKGKKSKINVRPLKPAMKASNKEHKKTVGHQFRNSLHLLMETLNSTTPHYVRCIKPNDE
KFAFSFDPARAVQQLRACGVLETIRISAAGYPSRWTYHEFFNRYRVLMTKKNIILNDKKE
TCRRLLDVVIKDPDKFQFGKTKIFFRAGQVAYLEKLRADKFRAACMMIQKTVRGWLQRVK
YRRLKKATITLQRYVRGYQARRLADFLRKTRAAIILQKQCRMLAARRRYLKFRSAAITIQ
ACARGMFVRKVYHELLLQHKATVIQKNLRGWMARKRFCKIRNAVIYLQCCFRRMKARREL
KTLKIEAKSVEHYKKLTSGMENKVVQLQRKVDDQNKEYKAVAEQMTAITAAQATEINKLH
KELDRCREHQGEENRATSLQEEIDELRKELEKSQKQHKILEDTSTRDKAELQQRVLELEK
ENTLLKHEKEELNQRIKSESNNVAEKFSEKIAKENEQSKKEIDEERSRYQNLLKEYSRLE
QRYDNLREEMTLVKQTPGHRRNPSNQSSLESDSNYPSISTSDVGDTEDAIQLVEEAGLEN
AAMDMTIFLKLQKRVRELEQERKSLRAELEQKEALETKKMPNEYNSIPDNDQAAEMAYDS
LKRHELESENKKLKNELNELRKAIAEKATMDDPTNESENTYNILLHQLKEANEELEVRKE
EVLMLRTQIVKAAQQKEEAKSTDNVTEKYEWKKSDENTDKDDAIEAYNGVCETNRLLETQ
LQAQIKQHEEEVERMRAQIEAIKEEMEKQQQILTHTLQMSPDARIEYNVQQEITRLTNEN
LDLKELVEKQEKNEKKLKKQLKIHMKKVQDLEARSTAPKEPRREQLTRQVTVQRKEKEFQ
GMLEYIKEDETLLIRNLITDLKPQAVSATVPGLPAYILFMCLRHADYINDDQKVHSLLTG
TINGVKKVLKKHNDDFEITSFWLSNSCRLLHCLKQYSGDEDFTKQNNTRQNEHSLKNFDL
TEYRQVLSDLSIQIYQQLVKVAEGLLQPMIVSAMLENESIQGLSSVKPMGYRKRSSSRLD
GDDSYTLEAMLRQLNMLNNTMCEHGLDPEIIRQVFRQLFYVINAVTLNNLLLRKDVCSWS
TGMQIRYNISQLEEWLRGKNLQQSGAVKTMEPLIQAAQLLQVKKKTTDDAAAICLMCKAL
STQQIVKILNLYTPVNEFEERVTVSFIRNIQSFLQDRNEAPQLLMDFKHTFPVMFPFNPS
ALNLDTIHIPANLNLTFLIRV
NT seq
5466 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtctcggaactttacaccaagtatacaaaggtttggatccctgacccagaggat
gtttggaaatcagcagaaatcgttcagaactacaaagagggggatgagatccttcatctt
aaactggaagatgaaatgcctgtggagcatcctgtcaattccaagacaagtcagttgcct
ttcctgcgtaatcccgatatccttgtgggtgagaatgacctgacggctctcagttatctt
catgaacctgctgtgctccacaacttgaaggtccgcttcattgagtccaatgccatatac
acttactgcggtatcgtcttagtcgctattaatccttatgaacagctgccaatttatgga
gaagatgtcattcaggcatatagtggccagaacatgggggacatggacccccatatcttt
gcagtggctgaagaagcatacaaacaaatggccagagatgagaagaaccaatcaatcatc
gtaagcggggagtctggagctggaaagacggtgtctgctaagtacgccatgcgttatttc
gccactgtgggtggatcagccagtgaaacaaatgttgaggagaaagtcctggcctcaagt
ccaattatggaggccatcgggaatgcaaagacaacaaggaacgataacagcagtcgcttt
gggaaatatatccaaattggctttgaccggcgatattatataattggtgccaacatgcgg
acatatctgctagagaaatcaagagtggtttttcaggcagaggatgaacgtaactaccat
atcttctaccagctgtgtgcctcggccgaccggccagaattcaaagaactgtgcttaagc
agcgcagaaaactacttttacaccactcggggtggtggcatcctaatagatggagttgat
gatgctgaagacttcaatagaacttgtaaagccttcactctacttggtgtcaaggaagca
aatcagatgaagatttacagagtaatagcttcaattctccacctgggaaatgtagaaatt
gtttcagaacgagatgtcgacacttgtggtattgctaaagaagatgagcacctaaactac
ttctgtaatttactgggagttgagcacgatcagatggaacactggctatgtcaccgcaag
cttatcacaacgtcagagactttcattaagacaatggccaagcagcaagccatcaatgcc
aaaaatgccttggccaagcacatctacgctcagctcttcaattggatcgtggaacaaatc
aacaaagcactttatacaaccagcaaacagcattcattcattggagttctggatatttac
gggtttgaaacatttgagatcaacagctttgaacaattttgcatcaactatgccaacgag
aaattacagcagcaatttaatctgcatgtcttcaaactggagcaggaggaatacatgaag
gaacaaataccttggactctcattgacttctctgacaaccagccatgcattgatctgatt
gaggcaaaattgggcatcttagacttgttggatgaagaatgcaggatgccaaaaggtaca
gaccaaagttgggcccagaaactgtacgaacgcctttcaagcagccgccactttcagaaa
ccccgaatgtccaatatggcttatgtcgttatacactttgcagacaaggtggaatatcaa
tgtgatgggttcctggagaaaaaccgagacaccgtgtatgaagagcagatcaacatactt
aaggccagcaagtaccagttggtggctgacttgttccaggatgaggattcttctgcatcc
attgcaaaagggaaaaagtcaaaaataaatgtccggcctctcaaaccggccatgaaggca
tccaataaagagcacaagaaaaccgttggacatcagtttcgaaactccctgcatctgttg
atggagaccctgaattccacaacaccacattacgtacgctgcatcaagccaaatgatgag
aaatttgccttctcgtttgatccagcacgggctgtacagcaactccgggcctgtggagtg
ttggagaccatccgtattagtgctgcaggatatccatctcggtggacctaccatgaattc
ttcaacaggtatcgggtcctaatgacgaagaagaacataattttaaatgataagaaagag
acctgtaggaggcttctggacgttgttatcaaggatcctgataaattccagtttggcaaa
accaagatttttttccgtgctggtcaggtagcgtacctggaaaaactcagagcagataag
ttccgagccgcatgcatgatgatacagaagacagtccggggctggttgcagagagtcaag
tacagaaggctgaagaaggccaccattactcttcagagatacgttcgaggttatcaggca
cgcaggttggcagacttcctgcggaaaacgagagctgcgataattttgcagaagcaatgc
aggatgttggctgctcgccgtcggtacttgaaatttcgcagtgcagccatcacgattcag
gcttgtgcccggggaatgtttgtccgcaaggtgtaccatgaattattactccagcacaaa
gccactgtcattcagaagaatttaaggggctggatggctagaaagagattctgcaagatt
cgcaacgcagtcatttatcttcagtgctgctttaggcggatgaaagcacgtcgtgagctg
aagacactgaagattgaagcaaagtcagtagagcactacaagaaactcaccagcggaatg
gaaaataaagttgtacaacttcaaaggaaagtagatgatcagaataaggagtacaaggca
gtagcggagcaaatgacggcaataaccgcagcgcaagctactgaaattaataaacttcat
aaggagttggatcgatgtcgagaacaccagggagaggaaaatagagcaaccagtttacag
gaggagattgacgaactacgcaaggaacttgagaaatcgcagaagcaacacaaaatcttg
gaggatacttccaccagagataaagcagaacttcagcagcgtgtgctggagctggagaag
gagaacacactactgaaacatgaaaaggaggaactgaaccagcgcatcaagagtgaatcc
aacaatgtagcagaaaagttctcagagaagatagcaaaggaaaatgagcagtcaaagaag
gagatagatgaagaacgctctcgatatcaaaacctcttgaaagagtattcccgcctggag
cagcgatatgacaatctgcgggaggagatgacattagttaagcaaactccaggccatcgg
agaaacccctccaatcagagcagtcttgaatctgattctaactatccttccatctcaact
tctgacgttggggatacagaggatgcaatacaactggtggaggaagctggcttggagaat
gctgccatggatatgaccatattcctgaaactgcagaagcgggtgcgggaactggaacaa
gaaagaaagtcgttacgcgcagagttggagcagaaggaagcactggaaaccaaaaagatg
ccaaatgagtacaacagcattccggacaatgatcaagcagcggaaatggcctatgacagc
ttaaagagacacgagttggaatctgaaaacaaaaagctaaagaatgaactcaatgaactg
agaaaagctatagcagagaaggcaactatggacgacccaactaatgagtcagaaaatacg
tacaatatacttctccatcagctgaaggaggccaatgaggagctggaggtgcgcaaggag
gaggtcctcatgctcagaacacaaatagtcaaagccgctcagcagaaggaggaggccaaa
agcacggataacgtgactgagaaatatgagtggaaaaaaagtgatgaaaacacagataaa
gatgatgccattgaggcatacaatggtgtttgtgaaacaaataggctgctggagacacag
ttgcaggcccagatcaagcaacacgaggaagaggtagaaagaatgcgggcacagattgag
gctataaaagaggagatggaaaaacagcaacagatcctcacacatacgctacagatgtct
ccagacgcacgcattgagtataacgtacaacaggagatcacccgcctcaccaatgagaat
ctggatctgaaagagctggtggagaaacaggagaagaatgagaagaaattaaagaagcaa
ctcaagattcacatgaaaaaggttcaagatcttgaagcccggagcactgcaccgaaggaa
ccaagacgagaacaactaaccagacaagtcactgtgcaacggaaggagaaagagttccag
ggaatgttggaatatattaaggaggatgaaactctacttattcgcaacctcatcacggac
ctgaagccccaagcagtctctgccacagtgccaggcctaccagcatacatcctcttcatg
tgccttagacatgcagattatataaacgatgaccagaaggtccactcgcttctcactggg
actatcaatggcgttaaaaaagtattaaagaaacacaatgatgactttgaaataacatca
ttttggttatcgaatagttgtcgccttttgcattgtttaaaacaatacagtggagatgag
gatttcacgaagcagaataacacacggcagaatgaacatagcctgaagaactttgacctc
acagagtaccgccaagttctaagtgacctctctattcagatatatcagcaattggtcaag
gttgcagaaggtcttcttcagccaatgatagtgtcagccatgttggagaatgagagcatc
cagggtctgtcgagtgtgaaacccatgggctacaggaaacgttcttcaagccggctcgac
ggagacgacagctacactctagaggccatgttgcgccagcttaacatgttaaacaacacc
atgtgtgaacatggactggatcctgagattatccgacaggtctttcggcagctcttctat
gtcatcaatgctgtaacacttaacaacctgctgctgagaaaggacgtgtgctcgtggagt
acaggaatgcaaatcaggtacaacatcagccagctagaagagtggttgcgggggaaaaat
ttacaacaaagtggggctgtgaagacaatggagcctctaattcaagctgcacaacttctc
caagtgaagaagaaaaccactgatgatgctgcagccatctgtttaatgtgtaaagctcta
tccacacaacagatcgtcaaaattctgaacctgtacacaccagtaaatgagtttgaagaa
cgtgtaaccgtatcattcattagaaatattcagtcctttttacaagatcgcaatgaagct
cctcaactgctaatggactttaaacacacatttcctgttatgtttccatttaatccttct
gcactcaacctggacaccatacacatcccggcaaatttgaacttgactttcctcattcga
gtgtag
DBGET
integrated database retrieval system
