Leucoraja erinaceus (little skate): 129712281
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Entry
129712281 CDS
T09122
Symbol
vps11
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri04140
Autophagy - animal
leri04148
Efferocytosis
leri05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
129712281 (vps11)
04148 Efferocytosis
129712281 (vps11)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
129712281 (vps11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
leri04131
]
129712281 (vps11)
Membrane trafficking [BR:
leri04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
129712281 (vps11)
Hops complex
129712281 (vps11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_N
VPS11_C
Clathrin
zf-C3HC4_2
zf-RING_2
zf-rbx1
zf-C3HC4
zf-C3H2C3
TPR_GEMI5
ISG65-75
zf-RING_5
GHL13
Beta-prop_EML_2
zf-ANAPC11
zf_RING_Vps8_fungal
zf-Nse
zf-RING_UBOX
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
129712281
NCBI-ProteinID:
XP_055516555
LinkDB
All DBs
Position
32:3714690..3733283
Genome browser
AA seq
937 aa
AA seq
DB search
MAAFLQWRRFVFFDKELLKEPLSAPPVPVPEREFRCPGDAAFSVCTSGRGSLVLGDIEGN
IWFLTRTLQFSSFQAYKLRVTHLFQLKQHSILVSVGEDEPGINPLVKVWNLEKRDGSGNP
LCTRIFSAIPGNKPTEVSCLTVHENLNHMAIGFTDGSVVLKKGDITRDRHSKTDVIAEGT
YPITGLGFQQSGKQTHLFVVTTENVKSYNVSVKDFPAMELDNHGCSLHCSALCDPSQDNQ
LIVAGDDCVYLYQPDERGPCFAFEGQKQIVHWYRGYLIIVSKDKKSSKTDFVSGNGQSSE
KQILTIYDLDNKFIAYTAAFDDIVDVLAEWGSLYVLSSDRKISILQEKDTQTKLEMLFKK
NLFVMAINLAKSQHLDNDGLAEIFRQYGDHLYVKGDHDGAIQQYIRTIGKLEPSYVIRKF
LDAQRIHNLTAYLQALHRQSLANEDHTTLLLNCYTKLKDSSKLEEFIKTSESEVHFDIET
AIKVLRQAGYFNHAVYLADKHFHHEWYLKIQLEDIKNYQQALHYIGKLPFDQAERNMKKY
GKTLMHHVPNETTELLKILCTDYRPSNEPLPEREPGSRYENKANSEEFIPIFANNSRELK
LFLEHMIQVQDNSPQGVYDTLLELRLQDWAHEENVKAKKQLQEDAMSLLKSGLFKTVFDK
ALVLCQMHNFKDGVLYLYEQGRLYQQIMHYHMQNNEYAKVIETCERYGEQEACLWEQALG
YFARKEEDCKEYIMSVLRHIDRNNLMPPLLVVQTLAHNSTATLSVIKDYLVNKLQQESDH
IAEDERRIKQYREETKKIREEIDDLETSAKTFQKSKCSMCNSPLELPSVHFLCGHSFHQH
CFESYAEHDTECPTCMPENHKVMDMIRAQEQKQDLHDKFQHQLKCAKDGFSVIADYFGRG
VFNKLTLITDPFPGRAAAANIDAGLQRDLLMHSKSTA
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atggcggcttttcttcaatggaggcgcttcgtgtttttcgacaaggagctgctgaaggag
ccgctgtcggcgccgccggtcccggtcccggagcgggagttccgctgcccgggggacgcg
gccttcagcgtctgcacgagtggccgaggcagcctggtgctgggagatatcgaagggaat
atttggttcctgacacggactttgcaattcagttccttccaggcttataaactccgagtt
acacatttgtttcaacttaaacagcacagtattcttgtgtccgtgggagaggatgaacca
ggaattaaccctctggtaaaggtctggaatctggagaagcgagatggcagtggaaatcct
ctgtgcaccaggatcttttccgctattccaggaaataagcccacagaagtctcatgtctc
actgtccatgaaaacctcaaccacatggcaattggattcaccgatggtagtgttgtcctg
aaaaaaggagacatcacccgtgacaggcacagcaagactgacgttatagcagaaggaact
tatcccatcactggcctggggttccaacagtctggtaaacagacccatctgtttgtggtt
actacagaaaatgtaaagtcgtacaatgtatcagtgaaagatttccctgcgatggagctg
gataaccatggctgcagcctgcactgttctgccctgtgcgacccttcacaggacaaccag
ctgatagttgccggggacgactgcgtgtatctctaccagcctgatgagcgtgggccttgc
tttgcctttgaggggcagaagcagattgttcactggtatcgtggctatctcatcattgtc
tcaaaggacaagaaatcttcaaagacagattttgtttctggtaatggccagtcttcagag
aagcagatactgaccatctacgacctggacaataagttcattgcgtacacggcagcattc
gatgacattgtcgacgtactggcagagtggggctccctctatgtgctgtctagtgatcgg
aagatcagtatcctgcaggaaaaggacacacagacaaagctggagatgttgtttaagaag
aatctgtttgttatggcaatcaacctggcaaagagccaacatctggataacgatggattg
gcagagatctttcgacagtacggtgaccacctgtacgtcaaaggggatcacgatggggcc
atccagcagtacatccggactatagggaagttggagccatcctatgtgatacggaagttt
ttggatgcacagcgaatccacaatctaacggcgtatctgcaagccttgcaccggcagtca
ctggccaacgaggaccacacaactcttctccttaactgttacaccaagctgaaggatagc
tccaaacttgaggagttcattaagaccagtgagagtgaggtgcattttgacattgaaacc
gccatcaaagtcctgcgtcaagctggttacttcaatcatgccgtctatctcgccgataag
cacttccatcatgagtggtacctcaaaatccagctggaggatatcaagaactaccaacaa
gccctccattacattggaaaactgccctttgaccaagcagaaaggaacatgaagaagtat
gggaaaacactgatgcatcacgttccaaatgagaccaccgagctgttgaagattctctgc
acggactaccgaccaagcaacgagcccctgccagagagagaacctggcagcagatatgag
aataaggcaaattcggaggagtttattccaatttttgccaacaactctcgtgagctgaag
ttgtttctggagcacatgatccaggtgcaggacaactctccacagggagtgtacgacaca
ttgcttgaactcaggctgcaagactgggcccatgaggagaatgtcaaggcaaagaaacaa
ctgcaggaagatgcgatgagcctgttgaagagtggattatttaaaactgtttttgacaag
gctctggtactgtgtcagatgcacaatttcaaagatggtgtgctgtacctttatgagcaa
ggacgactgtaccagcagatcatgcactaccacatgcagaataacgagtacgccaaggtg
attgagacttgtgagcggtacggtgagcaggaagcctgcctgtgggaacaagcgcttggc
tattttgctcgaaaggaggaggattgtaaagaatacatcatgagcgtgctgagacacatt
gacaggaacaacctcatgccccctttgctggttgtgcagacactggctcataactccaca
gccacgctctcggtcattaaggattacctcgttaacaaactgcagcaggagagtgaccat
atcgcagaggacgagcgaaggatcaaacagtaccgagaggaaaccaagaagatccgagag
gagattgacgatctcgagaccagtgccaaaactttccagaaatccaagtgcagcatgtgc
aacagtcccctggaactcccctcggtccacttcctgtgtggccattctttccaccagcat
tgctttgagagttacgcagaacatgacacagagtgcccgacctgcatgccagaaaaccat
aaagtcatggacatgattcgagcccaggagcagaaacaggatcttcatgacaagttccag
caccagttgaagtgtgcaaaggatggattctcggtcatcgccgactattttggccgtgga
gtctttaataagctgacgctaatcacagacccgtttccagggagagctgccgctgcaaac
attgatgctggactgcagagagacttgttgatgcactccaagagtacggcttag
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integrated database retrieval system
