Leucoraja erinaceus (little skate): 129712305
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Entry
129712305 CDS
T09122
Symbol
thrb
Name
(RefSeq) thyroid hormone receptor beta isoform X1
KO
K08362
thyroid hormone receptor beta
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri04080
Neuroactive ligand-receptor interaction
leri04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
129712305 (thrb)
04081 Hormone signaling
129712305 (thrb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
leri03000
]
129712305 (thrb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
leri03310
]
129712305 (thrb)
Transcription factors [BR:
leri03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
129712305 (thrb)
Nuclear receptors [BR:
leri03310
]
1. Thyroid hormone like
1A. Thyroid hormone receptor (THR)
129712305 (thrb)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
129712305
NCBI-ProteinID:
XP_055516592
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Position
2:89537036..89728243
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AA seq
369 aa
AA seq
DB search
MSGYIPSYLDKDELCVVCADKATGYHYRCITCEGCKGFFRRTIQKNLHPTYSCKHEEKCI
IDKVTRNQCQECRFKKCIAVGMATDLVLDDGKRLAKRKLIEENREKRRREEVTKTLVDKP
EPTEEEWELIRSVTEAHIATNAQGDHWKQKRKFLPEEIGQTPIENAPEGSKVDLEAFSEF
TRIITPAITRVVDFAKKLPIFCELPCEDQIILLKGCCMEIMSLRAAVRYDSESETLTLNG
EIAVKREQLKNGGLGVVSDAIFDLGISLSTFNLDDSEVALLQAVLLMSSDRPGLTSIDKI
EKIQESFLLAFEHYINYRKHNIAHFWPKLLMKVTDLRMIGACHASRFLHMKVECPTELFP
PLFLEVFED
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggttatattccaagttatctggacaaagatgagctttgtgttgtgtgtgctgac
aaggccacaggatatcattatcgttgcatcacctgtgaagggtgtaagggctttttcagg
agaactatacagaaaaaccttcatccaacctacagttgtaaacatgaagaaaaatgtatc
atcgataaagttacaaggaatcaatgtcaagaatgccggttcaaaaagtgcattgctgtt
ggcatggcaactgacttggtattggatgatggcaaacggctagcaaaacgtaaactaata
gaagagaaccgagagaagaggcgtcgagaggaggtgacaaaaacacttgttgataaacct
gagccaacagaagaggaatgggaacttatacgatcagtgacagaggctcacatcgccacc
aatgcacaaggagaccattggaaacagaaacggaaatttctgcctgaggaaattgggcag
acaccaatagagaatgcacccgaagggagcaaggtggacctggaggccttcagtgagttt
acaagaattatcacgcccgcaataacaagggtggttgattttgccaaaaaattaccaata
ttctgtgagctgccatgtgaagaccagataatccttctgaaaggctgttgtatggaaatc
atgtccctcagggcagcagtccgttatgactctgagagtgagactttaactttgaatggt
gagatagctgtaaaaagagaacagttaaaaaacggaggccttggggttgtatctgatgca
atctttgatctgggaatatcattgtctacgttcaacttggacgacagtgaggtggctcta
ctccaagctgtgcttttgatgtcttcagatcgacctggccttacaagcatagacaagata
gagaaaatccaggagtccttcctccttgcttttgaacattacattaattatcgtaaacac
aatattgcccacttttggccaaaactactgatgaaggtgacagacctgcgaatgattgga
gcctgccatgcaagtcgctttcttcatatgaaagtggaatgtccaacagaactttttcca
ccattattcctggaggtctttgaagattag
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