Leucoraja erinaceus (little skate): 129712324
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Entry
129712324 CDS
T09122
Name
(RefSeq) cytotoxic and regulatory T-cell molecule isoform X1
KO
K16361
cytotoxic and regulatory T-cell molecule
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
129712324
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
leri04515
]
129712324
04090 CD molecules [BR:
leri04090
]
129712324
Cell adhesion molecules [BR:
leri04515
]
Immunoglobulin superfamily
Nectin family
129712324
CD molecules [BR:
leri04090
]
Proteins
129712324
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2-set_2
Ig_3
I-set
V-set
ig
C1-set
Ig_2
C2-set_3
DUF6377
PFF1_TM
MIT_ATG1
DUF6947
Ig_PDGFR_d4
FraC
CD20
YxzE
DUF4834
DUF2500
Motif
Other DBs
NCBI-GeneID:
129712324
NCBI-ProteinID:
XP_055516632
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Position
32:complement(7195852..7223018)
Genome browser
AA seq
477 aa
AA seq
DB search
MLTIRWYTVRCMKLDSSFNNVHRPFVFILLANSQSLQWKFITVLEGNSAVLNCTMKKSEG
SYIEWKNPKQQVLYFNKKKELRDHRFKLVNYSTSQLIITLRDTTVDDDGIYSCLYYAHKI
IKKQVHLTVLAPPSNPMLSVSKRSLKEKVVRCITKGSKPKPQVTWLLNNRVELHGRTKYK
QENNSAKYTTISILKLKRHNKNSRIDCLVRHEALMNRILRATYRFDNNYNLFEPTESYAQ
TTTSDVATTSPEPTMDSEQPDLDKEDFYTRETPKTKLENDTTLNASSTPIMELPITEIQK
STFKTKAGSFIGYGSTPLNSNENSTERNERTTFNSTITWNKANTSSIDSEKTLTIKCHSN
LTIENNGKYEKQQMKKNGALLLILVSFLICALFIIFQLFVLKLWKQHLKWKKQKDESDIT
GESNKSNKSSNEENVRAENDNQDSNLQTQYIVHTNSEERVKQYCNDIPEDQTQESTV
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgctaacaataaggtggtacactgtgagatgcatgaaactagattcctcatttaataat
gttcacagaccatttgtttttatccttctagcaaattcacaaagcctacagtggaaattt
attactgtgctcgagggaaattcagcagttctcaattgtacaatgaaaaaaagtgaagga
tcatatattgaatggaaaaatccaaagcaacaagttctatactttaacaaaaagaaagag
ctaagggatcacagattcaaattagttaattactcaacctcacagttaattatcacactt
cgcgataccacagtggatgatgacggcatctatagctgcttatattatgctcataaaata
ataaagaagcaagtgcatctcactgttttagcaccaccttcaaaccctatgttgagtgtc
agcaaacgttcattgaaagagaaggtggtccgttgtatcaccaaaggaagcaagccaaag
cctcaagtaacctggctcctgaacaacagagtggagttacatgggcgcacaaaatataaa
caagaaaataatagtgcaaagtatacaacaatcagtatattgaaactcaaacgacataac
aagaattccagaattgactgtttggttcgacatgaagcattaatgaacagaattcttaga
gcaacctacagatttgataacaattacaatttatttgaaccaactgaatcatacgcacaa
acaactacaagtgatgtggctacaaccagtccagaaccaacaatggacagtgagcaacct
gacctagacaaggaggacttttacacccgagaaactccaaaaactaaattggaaaatgac
acaacattgaatgcaagctctacacctattatggagttaccaatcacagaaattcaaaaa
agcaccttcaagacaaaagcaggttcattcatcggatatggtagcactccactcaattca
aatgaaaacagcacagagagaaatgaacggactacattcaattctaccattacctggaat
aaagcaaatacctcatccattgacagtgaaaaaactttgacaataaaatgtcacagcaat
ttaaccatagaaaataacggaaaatatgagaaacaacaaatgaagaagaatggagcccta
ttattgattctagtatctttcctgatttgtgctttgtttatcatcttccaattattcgtg
ctaaaattatggaaacagcatttaaagtggaaaaagcaaaaagatgaatctgatatcaca
ggggaaagtaacaaatcaaataagtcaagtaacgaagaaaatgttcgagcagaaaatgat
aaccaagattctaatcttcaaacgcaatacatagtccatacaaattcagaagaacgagta
aaacagtattgtaatgatatacctgaagatcaaacacaagagagtacagtttaa
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