Leucoraja erinaceus (little skate): 129712413
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Entry
129712413 CDS
T09122
Symbol
robo4
Name
(RefSeq) roundabout homolog 1 isoform X1
KO
K06784
roundabout, axon guidance receptor 4
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
leri04515
]
129712413 (robo4)
Cell adhesion molecules [BR:
leri04515
]
Immunoglobulin superfamily
ROBO family
129712413 (robo4)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
V-set
C2-set_2
AveC_like
Motif
Other DBs
NCBI-GeneID:
129712413
NCBI-ProteinID:
XP_055516806
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All DBs
Position
32:complement(18732121..18828498)
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AA seq
1221 aa
AA seq
DB search
MMPSFASLLLYLYLFVEAESSKVCRCQCTCPPDRPLRGTRHLHSFKPSHRSRNSRLRLDE
SPPEIVEHPTDLAVFWGEPATLNCRAEGRPHPVIEWYRNGERVETSNDDPLSHRTLLPHG
SLFFFQVIQRRKGKSDEGIYTCVARNHLGNALSKNASLYVATLREEFRLQPSSVVVALGE
QADMECLPPRGHPEPTVTWKKDGAPLDDKDQRYRVTVGKLTIFSTLRSDSGVYMCVATNK
VGQRESRAARMSVLEKPTFVQRPSDATVMAGDSVQFSCDARGDPLPRVVWKKENGMLPNG
RYEVNSDHTIRIHYTTASDSGVYTCLAENAVGSAAASASLTVRDALDTGQREKQEDTQRQ
MLDVRVHLANITILPSSSHVHLHWKVLSQPRNVEGFNVLFRSLVPLSTDWTVDQVADPEE
QNAELTTLRRGFMYEFKVQAYSGMFCSPDSNRKQGRIPEEVPDAPPDGVIIATTERRNDS
IVVSWKPPPPESHNGIIKGYKVWCLGNDTQYHRNWTVNSSTHQLEIPAMNSGIEYRVQIA
AINGAGIGVHTKPQYVYLDPLGQETSSESSTFGLVLEFVRQPVFIASAGSVIWVILVVLS
VCLYCRRAKQGHLQKKHKLSKGMYKWANDDIIIKHRMNLTDSPWLSNSWKSNSCSKTLSV
GSRRPLWMHSWENQTYREIGSTFEKTPVLRVHRPGLMPDNFLSGTANSDVSGKDLKTFST
PLTQRSTVSNCSVQMTPDHSPLPLLKNNINRNNISGYGHDVVKASQKMPPYLRPNVEFWD
KNCNKGNNGPVMAICRNPTPGNVPAAITSPASTRKGDGKTLMKTFCSPKAQHHGFGLRLV
DALPPPPPHPMQEPGPVERQSKAAKNPESSTISPGRQRREYCAPSGDTLPSQSRCYSLQS
TATLPLSADYNTERGLCPEQGAQYLELTDEGRQRHFTDILSTFERPFSPPHTYGYICGPQ
LSDLEMDMVDYDDEDDEDLDMEVARVNSHRYFHRLCRTPTSSLSECDSSIGGSLANGWGS
VSEDNFTSARCSMVSSSDGSFLMDANFAQALAVAVDSFCFGLAQPERETPYTALSSTSFL
PTTFPDNVSYNPEGSGSEVMSVYPESDPAPIWDWNLSWADEIEEKIAQKVEVARRNPIAL
GKDPNKPFRNPSDQQQLDKCTTDVYTSGLDMQVNPTLSAVHVSFATVGAPVHKSFAVRKK
VEKVGLLNLPVDADGLTMVKV
NT seq
3666 nt
NT seq
+upstream
nt +downstream
nt
atgatgccttcctttgcttcactcttgctttatctatacctttttgtcgaggcagagagc
tctaaagtctgccgatgtcaatgtacctgtccgccggacaggcctctgagaggaacgagg
catctacactccttcaagcccagccacagatctcgaaattcccggctgcgtctggacgag
tcgccgcctgagatagtcgagcatccgacagatcttgccgtattctggggcgagccggct
accctgaactgccgggcggagggcaggccccatccagtcatcgagtggtacaggaatggc
gaacgtgtggagaccagcaatgacgaccctctgtcccatcgcactctactgccacacggc
tccctcttcttcttccaggtgatccagaggcgtaaaggaaagtccgatgaagggatatac
acgtgcgtggcaaggaaccacctggggaacgccttgagtaagaatgcatcactctatgtg
gcaacgctccgggaggagttccgcctgcagcccagcagcgtggtggtggcgttaggcgag
caggcagatatggaatgtctcccgccccgcggtcaccccgagccaaccgtcacgtggaag
aaagacggggcacctctggacgacaaggaccagcgttacagagttactgtcggtaaactc
accattttctccacactgaggagtgactcgggagtgtacatgtgtgttgcaacaaacaag
gtgggccagcgggagagcagagctgcccgaatgtccgtattggaaaagccaacctttgtt
caaaggcctagtgatgccacggtgatggctggagacagcgtgcagttttcctgcgacgct
cgcggtgatccattgcctcgagtggtttggaagaaagaaaacggaatgcttcccaatggg
aggtacgaggtgaactctgatcacacaataaggattcattacacaactgctagtgactcc
ggtgtctacacctgcctggctgagaatgcagtgggttcagctgctgcctctgcctcgctc
acagtacgagatgctcttgacactggtcagagggagaaacaagaggacacccaaaggcag
atgctggatgtccgtgtacacctggccaacattaccattcttccatcatcttcgcatgtc
catctccattggaaggttctttcacagccgcggaacgttgagggatttaatgttttattc
cgttctttggtgccgctgagcacggactggacggtggatcaagttgccgacccagaggaa
cagaatgcagagctgaccacgctgaggaggggcttcatgtacgagttcaaggttcaggcg
tacagtgggatgttctgtagtcccgacagtaacagaaagcaaggaaggattccagaggaa
gtacccgacgctccccctgatggtgttatcattgcgaccacagagaggaggaatgacagt
attgtggtcagctggaagccacctcctcccgagtctcacaacggcatcattaaaggttac
aaggtttggtgcttggggaatgacacacagtaccacagaaactggactgtgaacagcagc
acgcaccagctggagatccctgccatgaattctgggattgagtaccgagtgcagatcgca
gccatcaacggtgcggggatcggagtgcacaccaagcctcagtatgtctacctagaccct
ttgggacaggagacgtcatcagagtcatcgacctttggactggtgctggagtttgtcagg
cagccggtgttcattgcaagtgctgggagcgtgatctgggtcatcctggtggtgctcagt
gtgtgtttgtactgtcgccgggcaaaacagggccaccttcagaagaaacacaagctgagc
aaaggcatgtacaagtgggctaatgacgacattataatcaaacacaggatgaacctgaca
gattcgccttggctgtccaactcttggaagtcaaacagctgctccaagaccctcagtgtg
gggagtcgccgtcctctctggatgcacagctgggagaaccagacgtacagagaaataggc
tcgacatttgagaagactccagtgctgagagtccatcggcccggactgatgcctgacaac
ttcctgagtgggacggctaactctgatgttagtggcaaagatctgaagacgttcagcact
ccgctcacacagaggtccaccgtatccaactgcagtgtccagatgactccagaccacagc
cctctgcctttgctgaagaacaacatcaacagaaacaacatcagtggctatggtcacgat
gtagtaaaggcgtcgcagaaaatgccgccctatctgcggccaaacgtggaattctgggat
aaaaactgcaacaaaggaaacaacgggccggtaatggccatttgtcgcaacccaacgcca
gggaacgtgccagccgccatcaccagcccagcgagcacccgcaaaggtgatgggaagacg
ttgatgaagactttctgctctccaaaggctcagcatcatggttttgggctaaggctggtt
gatgctcttcctcctcctccccctcaccctatgcaggaacctggaccagtggaacggcaa
agcaaagccgcaaagaatcctgaatcgagtacgatctcgccaggaaggcagaggagggaa
tactgtgctccctctggagacacgttgcccagtcagtccaggtgctacagccttcagtcc
actgccaccctcccactgtctgcagactataacactgaaaggggactttgtccagaacaa
ggggctcagtacctggagctaacagacgagggcagacaaagacactttacggacatcctg
tccacatttgaaagaccattctcacctccccatacgtacgggtacatctgcggtccacag
ctctccgacctggaaatggacatggtggactatgacgatgaggatgacgaagacttggac
atggaggttgcccgcgtgaactctcaccgatacttccaccggctctgccgcaccccgacc
tccagcctcagcgagtgtgacagctccatcgggggctcgttggccaatggctggggctcg
gtgtccgaggacaacttcaccagcgcccgctgcagcatggtcagctcctccgatggttcc
ttccttatggacgccaactttgcccaggccctggccgtggcagtggacagcttctgcttt
gggctggcccagcccgagagagagactccatacacagctctctcttcaacctcctttctg
ccgaccaccttccctgacaatgtgtcctacaatccagagggttcaggatcagaggtcatg
agtgtgtatccggaatctgacccggctccgatttgggattggaatctgtcttgggcagat
gaaatagaagagaaaatcgcacagaaggtggaagttgcaaggaggaacccaatagctctt
ggaaaagatcccaacaaacccttcaggaatccatccgaccaacaacagctggacaagtgc
accactgatgtatacacctccgggctggatatgcaggtgaaccctactctcagtgcagta
cacgtgtcctttgcaacagtcggagctccggtgcacaagagctttgccgtgaggaagaag
gtggaaaaagttggactgttgaacttgccagtggatgccgatggtctcaccatggttaaa
gtttga
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