Leucoraja erinaceus (little skate): 129712477
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Entry
129712477 CDS
T09122
Symbol
pex1
Name
(RefSeq) peroxisome biogenesis factor 1
KO
K13338
peroxin-1
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
129712477 (pex1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
leri04131
]
129712477 (pex1)
Membrane trafficking [BR:
leri04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
129712477 (pex1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
PEX-2N
PEX-1N
AAA_lid_3
AAA_16
AAA_14
nSTAND3
RuvB_N
NACHT
AAA_5
TIP49
RNA_helicase
Bac_DnaA
AAA_18
AAA_33
AAA_22
AAA_19
ABC_tran
Sigma54_activat
AAA_25
AAA_2
nSTAND6
AAA_7
DUF815
NPHP3_N
Mg_chelatase
TsaE
NB-ARC
AAA_28
nSTAND_NTPase5
AAA_29
ATPase_2
ATP-synt_ab
AAA_30
Viral_helicase1
APS_kinase
KTI12
cobW
Motif
Other DBs
NCBI-GeneID:
129712477
NCBI-ProteinID:
XP_055516929
LinkDB
All DBs
Position
2:91827657..91895720
Genome browser
AA seq
1282 aa
AA seq
DB search
MPRAGLGTVCVQLRLSNAKDCFLHLPPQPVSQLQLLQQQQQQQQECQAIELSWDLKRTAF
LSWVARRSTGLEEGNIAEISRHLGQKLGVKDGEQVFLRPCAHVSSCQKAVVEPLSPDDWD
ILELHSASLERHIMDQIRIVFPGGVFPLWIEKHTVIYIEVGSLMPSAAFGRLERYTELIV
SPKLRHVGKNSVEKDIFNEEFNLNSNKMQREKLEKPSEYSSKRLYDQQGMNEQLAIKPQD
ISQKSIISDIWHLIKNIFATNLELLEQQPSKAMDIDNFLSTFSKSIEMDSIFRLCKRFPY
NLDSMPWNQMQSDTVHIFPCHQGLLTLNSSDTQIIYGKLIKVLSHRQCIEQSKQDLQRKK
NATSDGNDTTNGIAKAEENKSCIVKIITHGYEHLIFKSADFHSGKVWVPDGLRKKLKLEA
SAAVRLTSLQLDPSLPTSIRLQPLQRLPQEINNDDIKSSFLSWLSSVSSDNFPFFAALSN
LVGIQVAEREIEFMLFVDQIVQKSENEENECFLLYPSLIDKIDIKVIMHPPLNKSIEVMT
VDDIDQMLPFYKLNCLGAVHNLATSAFEHILFSLLGHPLSWEIASVAQGLRSGALLLTGI
KGSGKTTLAKAICREAADKLEAHVEIINCKTLQGKRAENIRKKWEEAFTEAAWRQPSVIL
LDDLDHIAGSISASEHEHSAEAIHSRQISEILKYLIAEAVSRGTVIALIATSISEHTLHP
SLISAEGSHLFQCIQNISLPNQDQRVQLLTSVIQNKTVISLKTLQSIDFQRLAKATEGFG
ARDFVVLMERAMHSHLLICKHNREQELQLTTLNFLHALEGFVPISLRNANLHKPRDLGWN
EVGGLHEVKEILMDTIQLSVKYPQLFAKLPIRMRSGILLYGAPGTGKTLLASVVTKESGM
NFISIKGPELLSKYIGASEQAVRDVFSRAEAAKPCILFFDEFDSIAPRRGHDNTGVTDRV
VNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKSVYCPPPDQIARYEILKAL
SQTLPLADDVDFQQIASMTEYFTGADLKALFCNAQLDAIHSTLSSSVLQDAHSGSDSDAS
LSSMIFLNHSSGSDESVGDVEGGSEHSAFYLDTSEILPDDPCPNIWRLYFGSSYESEVGN
GTSSEQNSQCMSGPNSVTLDRTITSARDTVSSQLPSYMSSLQEGYQELTREQVEQLWAEL
NVIKANTKNKSMESNTQNQAGSTNTSQLICQSHLLTALASTRPSISQQEWSNFTEMYENF
RKSRAGKQNGVLVKAGQRVTLA
NT seq
3849 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgcgccggtctcgggaccgtgtgcgtgcagctccgactcagcaacgccaaggac
tgcttcctgcacttgcctccccagcccgtgtcgcagctgcagctgctgcagcaacaacag
cagcagcagcaggagtgccaagcaattgaattatcctgggatcttaaacggacagcattc
ctaagctgggtggcacgcagatctacaggacttgaagaaggaaacattgcagagatcagt
agacatcttggacaaaagcttggagtcaaagatggagaacaggtatttctcaggccttgt
gcacacgtctcttcctgtcaaaaggcagttgtggaacctctgtctcctgatgactgggac
atattggagctccatagtgcatcacttgaaaggcacattatggatcagatcaggatagtc
tttccaggaggagtatttccattgtggatagagaaacatactgtcatatatattgaagtt
ggctctctaatgccctctgctgcatttggaaggttggaacgctacactgaactcattgtc
tcacccaaactgcgacacgttggtaaaaattctgttgaaaaagacatttttaatgaagag
ttcaacttgaacagtaacaaaatgcagcgtgaaaaattagagaagccaagtgagtattct
tccaagagattgtatgatcaacaaggaatgaatgaacaacttgcaattaaacctcaagac
atttcccagaaaagcatcatatcggatatatggcatttgataaaaaatatattcgcaaca
aatttggaactcctagaacagcagccatccaaagcaatggacattgataattttttaagt
accttctccaagtccattgaaatggactcaatattcagactatgtaaaagatttccttac
aatttagactcaatgccatggaaccaaatgcaatctgatacagttcatatatttccttgt
catcaaggtttgcttactctaaacagcagtgacacacaaattatttatggaaaactaata
aaagttttgtcacatagacaatgcatagaacaatctaagcaagatctacaaagaaagaaa
aatgcaacttctgatggaaatgacacaacaaacggaattgccaaagcagaagaaaacaaa
tcctgcattgttaaaataattactcatggatatgaacatttaatatttaaatctgcagat
tttcacagtggaaaagtttgggttccagatggattgagaaagaagttgaaattggaagca
tctgctgcagtcaggttaacttcattacaattagatccatctcttccaaccagtattcgg
ttgcagccattgcaaagactgccacaggagattaacaatgatgatattaagtcctccttc
ctttcatggctaagtagtgtgagctctgacaatttcccattttttgctgcattatcaaat
cttgttggaatacaggttgctgaacgagagattgaatttatgctatttgtggatcaaatt
gtacaaaagtcagaaaatgaagagaatgaatgttttttattgtatcccagtttaattgac
aagattgatataaaggtgattatgcatcctccactaaacaagtccattgaagtaatgact
gttgatgatattgaccagatgctaccattttacaaattgaattgtttaggcgcagttcat
aatcttgccacgtcggcctttgagcacatcttgttcagcctattgggtcacccactttca
tgggaaattgcgtctgttgcacaaggtctccgaagtggagctctgctacttacaggaata
aagggcagtgggaaaactactttagcgaaagccatatgcagagaagcagcagataaactg
gaagcacatgttgaaattattaactgtaaaactttgcaaggtaaaagggctgaaaatatc
cgtaagaaatgggaggaagctttcacagaggcagcatggcgacaaccttctgttattctg
ttggacgacttggatcatattgctggttccatctctgcttcagaacatgaacacagtgct
gaggctattcatagcagacagatttctgaaattttgaagtatttgattgctgaagcagtt
tctcgtgggactgttattgcattgatcgctacaagcatttctgagcatactctgcatccc
tctttgatttctgctgaaggatctcatctatttcagtgtattcagaatatttcacttcca
aaccaggatcagcgagtccaactactaacctctgtaattcaaaataaaactgtcatttca
ttgaagacattacagagcattgactttcaaagactggcgaaagcaaccgaaggatttgga
gcaagagattttgttgtgttgatggaaagggctatgcactcacatttattaatatgcaag
cacaacagagaacaagaactacaattaacaacattgaattttctgcatgcccttgaggga
tttgtacctatttctctaagaaatgcaaatttacacaaacctagagatttgggctggaac
gaagttggaggtctacatgaagtcaaggaaatcctgatggataccattcaattatctgtc
aagtatccacaactgtttgcaaagctgccaatacgaatgcgatctggaatcctcctgtat
ggagcaccaggaacaggaaagacattattagcaagcgtcgtcaccaaagaaagtggaatg
aattttattagtataaagggccctgaactgctgagcaaatatattggtgcaagcgaacag
gcagttcgtgacgttttcagcagggcggaagcagccaaaccttgcattctgttctttgat
gagtttgattccattgcacctcgccgtggtcatgacaacactggggtgactgacagagtt
gttaatcaactgctcacgcaactggatggagtagaaggtctacaaggagtttatgttttg
gctgccacaagtcgtccagacttgattgatcctgctttgctaaggccaggtcgtctcgat
aaatctgtgtactgcccgcctcctgatcagatagcacgctatgagattctgaaggcattg
agccagactttacctttagcggatgatgttgacttccagcaaattgcaagcatgactgaa
tattttactggggctgacttaaaggctttgttctgcaatgcccagctcgatgctattcac
agcactctgtcatccagtgtactacaagatgcacattcaggatctgatagtgatgcgagt
ttatcttccatgatcttcttgaatcatagcagtggttccgatgagtctgtgggggacgta
gaaggtggttcggaacattctgctttttacctggacactagtgaaatattacctgatgat
ccatgccctaacatctggcgcctttactttggtagctcttatgaatcagaagtgggaaat
ggaacatcttcagaacagaactctcagtgcatgtcaggaccaaattcagtgaccctggat
cgcaccattacatctgcaagggacaccgtatcttctcagctcccttcatatatgtcgtca
ctgcaagaaggataccaggagctaactcgggagcaagtggaacagctatgggctgaatta
aatgttattaaagcaaacacgaagaacaagagcatggagagcaatactcaaaatcaagca
ggatccacaaatacttcccaacttatttgccaatcacatttactgacagcacttgcaagt
acaagaccctccatcagtcaacaagaatggagcaatttcaccgaaatgtacgagaacttc
cgaaaatctagagctggcaagcagaatggagtcctcgtcaaggctggacaaagagttact
ttggcataa
DBGET
integrated database retrieval system
