Leucoraja erinaceus (little skate): 129712524
Help
Entry
129712524 CDS
T09122
Name
(RefSeq) transmembrane channel-like protein 3
KO
K21988
transmembrane channel-like protein
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
leri02000
]
129712524
03037 Cilium and associated proteins [BR:
leri03037
]
129712524
Transporters [BR:
leri02000
]
Other transporters
Pores ion channels [TC:
1
]
129712524
Cilium and associated proteins [BR:
leri03037
]
Other cilia and associated proteins
Stereociliary proteins
129712524
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
SHS2_Rpb7-N
Motif
Other DBs
NCBI-GeneID:
129712524
NCBI-ProteinID:
XP_055516974
LinkDB
All DBs
Position
33:complement(547901..576299)
Genome browser
AA seq
1101 aa
AA seq
DB search
MTNQAANKPSKAAQRLHSLRKNSSNRKIFSAAYQEYENSSSEEDAEEGRRAECRDPEESF
QNIQIQKEIISTIRIKPWTMDKKLKVLRQAKEIVLKYEGRLTRTRGYQAAGAELWKRLGR
LVYNIMVLFIPWEMRIKKIESHFGSGVASYFIFLRWMFGINIVLTIMTGAFVILPELLAG
APFGSVTSKTIPAGYIGTAQDLDTIWSLGGYLQYSVMFYGYYGNKRKIGRAGYHLPLAYF
MVGMAMFAYSFIILLRKMAKNSRLSMASASDENYTFCWKLFCAWDYLIGNPEAAESKTAA
VINSIREAILEEQVKKKDRSLAVIISLRILANILVLLSLAGSIYIIYFVVDRSQELERTK
IELTLWEKNEVSVVVSLITMIAPSVFELVAQLEMLHPRTTLRFQLARVLVLYLGNLYSLI
IALLDKVNSMSMLDNTNDTGSSFLATRALPEEENLSTIVPEIRLRQNITFSSAYNKTKPI
SKFNKTATYDYNILSQQDQCWETYVGQEMLKLSIIDMLFTVGSILLIDFIRGLFVRYLSD
CWCWDLENKFPEYGEFKIAENVLHLIYNQGMIWMGAFFSPCLPAFNVLKLIGLMYLRSWA
VLTCNVPHQQVFRASRSNNFYLAMTLFMLFLCMLPTVFAIARYRPSQSCGPFSGQDKIYD
IVSDTIVNDFPGWFNMVMSYVTSPVVVLPALLLLFMLIYYLQSIARSLKFTNNQLRMQLQ
VERTEDKKKVSQMVAARFQEESKSGEHESDVTSQGSSLHSSPHRNGDLVNVDSPACARTH
VQSISHQLAHPANPPRVIDPTHHPPAGAALKQRVEHHPHRYPAAVAATTSGHYRAKPPAS
RVTRLPEHLRAEVPIGKCVRPVVYSPTQGPPQTILGRRVHTARYILVNERESRTRMMRPI
GRITRRYTMEEPREMVEMLPRKVKHYIMHRAQGVSSQLHFSEEEEEEEGDEEDVAQTSFI
TSPRPHSLSDLHQPTRFYIGDSKDSRLLIGKDSTQIQYGSYNEGQVVPGTSHDQGPDIQS
TGAHAKRKAKQRADQSLTESDSVSIASSSDLQNSSSDQYIQVIHSKDKCVKPSSDKLNTP
KSRANVELNVTEAKELICSNV
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaccaggcggccaacaaaccctccaaagctgctcagcggctgcacagtctccgc
aaaaactccagcaaccgcaagatcttctcggcggcttaccaggagtatgagaacagtagt
tcagaggaggatgcagaggaggggaggagggcggagtgccgggacccggaggagagtttc
cagaacatccagattcagaaggagataatctcgactattcgcatcaagccatggacaatg
gataagaagctgaaggtgttgaggcaggccaaggagatagtgctgaaatatgaggggagg
ctgaccagaacaagaggctaccaggcagcaggcgcagagctgtggaagcggcttgggaga
ctggtgtacaatatcatggtgctttttatcccctgggaaatgagaatcaagaaaattgaa
agtcactttggctctggtgtggcttcgtactttatctttctgaggtggatgtttggcatc
aacatcgtgctgaccataatgaccggagcatttgtcatcttacctgagctgttagcagga
gctccgttcggaagtgttacaagcaaaacaattcccgcgggatacattggaacggcacaa
gacctggataccatctggtcacttgggggctacctccagtattctgtcatgttctatggt
tactatggcaacaagaggaagattgggcgcgctggctaccatttgcccctggcctatttc
atggttgggatggccatgttcgcctacagcttcatcattctgctgcgcaagatggccaag
aactctcgactgagcatggccagcgcctctgatgaaaactacaccttctgctggaagctg
ttctgtgcctgggattacctgattggcaacccagaggctgcggagagcaagacggccgca
gtcatcaacagtatccgagaagctattctggaggagcaagtgaagaagaaggatagaagt
ctggcagtgatcatcagtctgaggatccttgccaatatcctggtgcttctctcgttggct
ggtagcatctacatcatctactttgttgttgatcgctctcaggagctagaacggaccaag
atcgagctcactctctgggaaaagaacgaggtcagtgtggtcgtttcactcatcaccatg
atcgcaccgtctgtgtttgagctggtcgcccagctggagatgttgcaccccaggaccaca
ctgcgcttccagctggccagggtgctggttctgtacctgggaaacctctacagtttgatc
atcgctctgcttgacaaagtgaacagtatgagtatgttggataacaccaatgacacaggc
tcatcattcttggccaccagagcactgccagaggaggagaatctctcgaccatcgtacct
gagatcaggctgaggcagaacatcaccttcagctcagcctacaacaaaaccaaaccaata
agcaagtttaataagacagccacatatgactacaacattctgtcacaacaagaccagtgc
tgggaaacgtatgtgggacaggagatgctgaagttgtctatcatagacatgttgttcacc
gttggcagcattctgctcattgacttcattcgtggcctctttgtccgatacctgagtgac
tgttggtgctgggatctggagaacaagtttcccgagtatggagagttcaagatagcggag
aatgtactgcatctgatatataaccagggaatgatatggatgggagccttcttctcacct
tgccttccagccttcaacgtcctcaaactgattggtctgatgtatttaaggagctgggca
gtgctgacgtgcaatgttccacaccagcaagtattccgagcatcaaggtctaacaacttc
tacctggccatgaccttgttcatgttgttcttgtgtatgctgcccactgtctttgctatt
gccagataccgcccatcacagagctgtgggcccttcagtggccaggataagatttatgac
attgtgtctgacacaatagtgaatgatttccccggctggttcaacatggtgatgagttac
gtcaccagtcccgtggtggtcctgcctgctctgctcctgctctttatgctgatctattat
ctccaatctattgctcgctcactaaagtttaccaacaatcaactccggatgcagctccaa
gttgagagaacagaagacaagaagaaagtgtcacagatggtagcagcaaggtttcaggaa
gaaagcaagagtggagaacacgagagtgatgtcaccagccaggggtcgtccctgcactcg
tcgccccataggaatggggacttggtgaacgtcgactcgcccgcctgtgccaggactcac
gtccagagtatttcccatcagctggctcatcctgccaaccccccgagggtcatcgacccc
actcaccacccgcccgctggagctgcactaaagcagcgggtcgaacaccacccacacagg
tacccagcagctgtggcagcaaccacgagtggccactacagagccaagccaccggccagc
cgagttaccagattgccggagcatctccgtgccgaggtgccgattgggaagtgcgtgaga
ccggtcgtctattcccccacgcaaggtcctccacagacgattctgggccgtagagtccac
actgcccggtacatcctggttaatgagcgggaatccaggaccaggatgatgcgtcccatc
ggcagaatcaccagacgttacaccatggaggagcctagagaaatggtggagatgctgcca
cgcaaggtgaagcattacatcatgcacagagcacagggggtgagctcgcagttacacttc
agcgaggaggaagaggaggaggagggggacgaggaagatgtggcacaaacctccttcatc
acatcacctcgcccccactccttgtcagacctccaccaacccactcgcttctacatcggc
gacagcaaagacagtcggctgctgatcgggaaagactcgacccagattcagtacgggtca
tacaacgaggggcaggttgtacctgggacgtcccacgatcagggacctgacatccaaagt
acgggagctcacgccaagcggaaggccaagcagagagcagaccagtcactgaccgaatca
gactcagtatccatagcatcgagcagcgacctgcaaaacagcagcagtgaccagtacata
caggtcattcacagcaaggacaagtgtgtgaaaccttctagtgacaaactaaacacaccc
aagtcaagagcaaatgttgaactgaatgttactgaggctaaagagctgatatgttcaaat
gtctag
DBGET
integrated database retrieval system
