KEGG   Leucoraja erinaceus (little skate): 129712542
Entry
129712542         CDS       T09122                                 
Name
(RefSeq) LOW QUALITY PROTEIN: RNA polymerase II elongation factor ELL
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
leri  Leucoraja erinaceus (little skate)
Pathway
leri03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:leri00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    129712542
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:leri01009]
    129712542
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:leri03021]
    129712542
Protein phosphatases and associated proteins [BR:leri01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     129712542
Transcription machinery [BR:leri03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     129712542
    Little elongation complex (LEC)
     129712542
SSDB
Motif
Pfam: ELL Occludin_ELL
Other DBs
NCBI-GeneID: 129712542
NCBI-ProteinID: XP_055517007
LinkDB
Position
33:2153318..2205004
AA seq 627 aa
MAAAAALGEERRXGLSCGRRVGCRQRLSIYHLKLTDTALRALETYERLAASLPNQPVICF
QGKQGQYIKIPAPKSECHDGVRCFSFYLSTDSKDKPQASFDCIHQYVSSFERNQLECLGS
IQDKITVCATDDSYQMTRDRMSQVEKESWSRATIEIKPGSTYQGTRKPISVRKQTTSPAT
DGVPVRKHSPTSNLCLGVKKNHVPSITQKPLRDRITHLLALKAYQKPELIVWLEREKANP
KDKAELSCILDQVAKLNVKDNSYTLRDELYKEIQQDWPGYNDEEKQLIRRQLIRKLQPSH
SCQSKNFQLSSSFQKSSGETSPHSSPNKTSLLKRSVPSDRTDSHRNKRSKVLHSRGNQLP
TLNGHLPHSTCPSATSNSCVSTKTEFQKTRTLLPENQNEFAEPFINCNNSTQIHINKTDK
EFKSNSDISGISRNLVAHRNLEQTDYSLPEDMELYAGHNRKKYKKHKEKEREHMKPEAQK
WLKDPTQRVGKQHKENIKEHETTNTSATASSTVEMPDYLLKYSAITSLELCQNYRNDFNA
EYNEYRDLHTRIGNVTEQFMQLGSKIKTLSSGTEEYKMAEDQIFEKYRKFKKAHPTYREE
KIRCEYLHRKLSHIKQLIIEYDQHNKP
NT seq 1884 nt   +upstreamnt  +downstreamnt
atggcggcggcggcggcgctgggcgaggagcggcgcnncgggctgtcgtgcgggcggcgg
gtgggctgccgtcagcgcctctccatctaccacctcaagctcaccgacacggcgctgcgg
gcactcgagacgtacgagcggctggcggcttccttaccaaatcaacctgtcatctgcttt
caaggaaaacagggacagtacatcaaaatacctgctcctaaatcagagtgccatgatggt
gtgcggtgtttttcattctacctgtcaactgacagcaaagacaagcctcaagcaagtttt
gactgcatccatcagtatgtttctagttttgaaagaaaccaacttgagtgccttggaagc
attcaagataaaattacagtttgtgccactgatgactcctaccagatgacccgagaccgc
atgtcacaggtagagaaggagtcgtggagtcgagcaactatagaaattaaaccagggtca
acatatcaaggtacacgcaaaccaatcagtgttcgaaagcaaacaacaagtccggcgact
gatggtgttccggttcgaaaacactctcctactagcaatctatgccttggggtgaagaaa
aatcatgtcccttctattacccaaaagccgctcagagatcgtatcacccaccttttggct
ttgaaggcgtatcagaagcctgagcttattgtatggttggagagagagaaagctaaccca
aaggacaaggctgaactgtcatgtatattggaccaggtggcaaaattaaatgtaaaagac
aacagctacacattaagggatgaactctacaaagaaattcaacaggattggcctggatac
aacgacgaagaaaaacaactgatacggagacagctaataaggaaacttcagccatcacat
tcttgtcagtccaagaactttcaactcagttcttcattccaaaagtcttcaggggaaacc
tcaccacattcaagccctaataagacttctttgttgaaacgatcagtgccttcagaccgg
acagattcacacagaaacaagagaagtaaagtattacattcgaggggtaatcagctgcct
actttgaatggtcatcttcctcattcaacatgccccagtgccacatcaaattcctgcgta
tctacaaaaacagagttccagaaaactcgcacgttactgcctgagaatcagaatgaattt
gccgagccatttatcaactgcaacaactcgacacagattcacataaacaaaactgataaa
gaattcaaaagcaacagtgatatttctgggatttctcggaacctagtagcgcataggaat
ttagaacagacagattactcccttccagaggatatggaactctatgctggccacaacagg
aaaaagtacaaaaaacacaaagagaaggagagggagcacatgaagccagaagcacaaaag
tggctaaaagacccaacacaaagggtcggaaaacaacacaaagaaaatattaaagagcat
gaaaccacaaatacatctgcaaccgctagttcaacagtggaaatgcctgactatttattg
aaatacagtgccattacatctttagaactgtgtcaaaactatcggaatgatttcaatgca
gagtacaatgaatacagagatcttcacacgagaattggaaatgtaacagaacagttcatg
cagttgggatcaaagatcaaaacacttagttctgggacagaggaatataagatggcagag
gatcaaatatttgaaaaatataggaaatttaaaaaggctcatcctacttatcgggaagag
aagattcgttgtgagtatctacaccgaaagctatcccacatcaagcagttgataatagaa
tatgaccagcacaacaagccataa

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