Leucoraja erinaceus (little skate): 129712592
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Entry
129712592 CDS
T09122
Symbol
sema6dl
Name
(RefSeq) sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D, like isoform X1
KO
K06842
semaphorin 6
Organism
leri
Leucoraja erinaceus (little skate)
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Motif
Pfam:
Sema
PSI
LapA_dom
DUF3042
Motif
Other DBs
NCBI-GeneID:
129712592
NCBI-ProteinID:
XP_055517101
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Position
33:6785208..7055326
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AA seq
1135 aa
AA seq
DB search
MHGVETDHITPFAVDQFVFLLGVSVIWRSQELERIVCQARTQLVSPHGERVTEVVSILRR
NSLVTSVKMSVNDCCFVVAAFLLTLHPAAAVSFPEDDKPINTIEFHFSRQHPLFRGRLLA
NESVHRLDYQLMLKIENMLYIAGRDQVYVINLNDPPRSEITSNQKLTWKSRQQDRSNCAM
KGKHKEECHNFIKVFVPKTDETVFVCGTNAFNPVCRYYRLDTLDHNGEEVSGLARCPFDA
KQTNVALFADNKLYSATVADFLASDAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAVEYG
NYVYFFFREIAVEHNNLGKAVYSRVARICKNDVGGSQRVLEKHWTSFLKARLNCSVPGDS
FFYFDVLQSVTDIIQINGYPTVIGVFTTQLNSIPGSAVCAFNMDDIEKSFKGRFKEQKTP
DSVWTAVPEDRIPKPRPGCCAGHSPAESYKTSIDFPDETLSFIKSHPLMDSAVPSLIEEP
WFTKTRVRYRLTAVAIDNTAGPHQNYTIIFIGSEAGILLKVLTKTSTSSLNDSLLLEEMD
VFNPLKCSSTNEDDRKVLGLQLDKDHHALFVAFSSCVIRVPLSHCEHHGTCKKACIGSRD
PYCAWLDNKSCGVVKPGVHTGFEQDVESGRTAHLGECHEIPVATPDYKPFGDPTAETDVP
AASASTAPTDPIVSPNVIAVQDDEETFDYFETLSAVPNGVRWDVQAGDANQMVHMNVLIT
CVLAAFVLGAFISGLAVYCHRDTYLRKARKMNKDAESAQSCTDSSGSFTKFNGLFDSPVK
EYPHSIDTPKLYTNLLSNGKELPPSGDPKTMIVDSHGQPPELAALPTPESTPVLHQKGIQ
PIKNQWEKAQNNINAARKESPLKSPQIIPSSPTPQSPINHNGQIPSAVVLPNATHAYNMS
FSNSNAHKAERKVQNIEMSIPGHSGKKEQLRAVEARNTLNDLLKHLNEGGTNSKTILGDI
PMTRQNLMLGPMSKIVEVPPKVPNREASLYSPSSTLPRHSPTKRVDVPSTSNIQLSSLER
ERDRGYPRNSSQRHSISVLPKNVISSLNGAMLSRHPSFNRGGYFPPAPPMRMDSVHGTPL
VIQPTSLSRQSSYSSSGTLPRSGIKRTPSIKPDVPPKPSFGQPTSPVTSLQKYTY
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atgcacggggttgagacggatcacattacaccattcgccgtggatcagtttgtttttctc
ctcggcgtgtccgtgatttggaggagccaagagttggagcggatagtttgccaggcgaga
acgcaacttgtgagcccccatggcgagcgtgtgaccgaggtagtttccattttgcgtagg
aactctcttgtgacaagcgtgaagatgtccgtgaatgattgctgcttcgtggtggctgcc
ttcctactgacgctacatccggcagcagccgtcagcttccctgaagatgacaagcccatc
aacaccatcgagttccacttttcgagacaacacccattatttagaggtcgactcttggcg
aatgaatctgtccatcgactggattaccagcttatgttgaaaattgagaacatgctttac
attgctggcagggaccaagtctatgttattaacttaaacgaccccccaagaagtgaaatt
acttctaaccagaaactaacctggaagtcaagacagcaagacaggagtaactgcgccatg
aaaggcaagcataaagaagaatgccataacttcatcaaagtgtttgtgcccaaaactgat
gagactgtttttgtctgtggaacaaatgcttttaaccccgtatgcagatattatcggttg
gatacgttggatcataatggcgaagaagtcagtggtttggcacgatgcccgtttgatgcc
aagcaaaccaacgttgccctctttgctgacaacaagttgtactcggcaacagttgcagat
ttcctagccagcgatgcagtcatctatcgcagcatgggagatggctcagctctgcgaacg
ataaaatatgactcaaaatggatcaaagagccacacttcctacatgctgttgaatatgga
aattatgtctatttcttctttagagaaatagctgttgaacacaacaaccttggaaaggct
gtttattctcgtgtggcgagaatttgtaagaatgatgtgggaggatcgcagagggtgctg
gaaaaacattggacgtcgttcctaaaagcccgattaaactgctccgttcccggagattcc
ttcttctactttgacgtgttgcagtctgtcacggacattatccaaatcaatgggtacccg
acggttattggtgtattcacaacgcaactgaacagtatccctggctcagcggtgtgtgcc
tttaatatggatgacatcgaaaaatcattcaagggcaggtttaaggagcaaaagacccct
gactctgtgtggactgcagttccagaagacaggataccaaagccaaggcctggttgctgt
gcgggacattcaccggcagaatcttacaaaacctccatcgatttccccgatgaaacgctc
tccttcatcaaatcccaccccctgatggactctgccgtcccctcactcatcgaggagccc
tggttcaccaagacacgtgtcaggtaccggctgactgccgtcgccatcgacaacaccgcc
ggcccgcatcagaactacaccatcatcttcattggttcggaagcgggcatcctcctcaag
gtgctgaccaaaaccagtaccagctccctcaacgacagcttgctcctggaggaaatggat
gtctttaacccattaaagtgtagctctacgaatgaagatgacaggaaggtgctggggctg
cagcttgataaagatcaccatgccttgttcgtggccttctccagctgtgttattcgtgtt
cctctcagtcactgcgaacatcacggcacgtgcaaaaaagcttgcatcggttcaagagat
ccctactgtgcgtggctggataataaatcctgtggagttgttaagcctggcgttcacacc
gggtttgaacaagatgtggaatctggcaggacagcgcatctcggagaatgtcacgagatc
ccagtcgctacaccagattacaaaccatttggcgacccgacagctgaaacggatgtccca
gcagcctctgcttccactgctccaactgacccgatagtatctccaaatgtgattgcagtg
caagatgatgaggagacttttgattattttgaaacattatccgctgtccccaatggtgtg
agatgggacgtgcaggccggagacgccaaccaaatggttcacatgaacgtgctgatcacc
tgcgtcctggctgcctttgtcctgggtgccttcatttccggcctggctgtgtactgccac
cgtgacacctacctgcgcaaggcgaggaagatgaacaaggacgccgagtcggcgcagtcg
tgcaccgactccagcggcagcttcactaaattcaacgggctcttcgacagccccgtcaag
gagtacccgcacagcatcgacacccccaagctgtacaccaacctgctgtccaacggcaag
gagttgccgcccagcggcgacccaaagaccatgatcgtggatagccacgggcagccgccc
gagctggcggccttgcccacgccagagtccacgcccgtactccaccagaaaggcattcag
cccatcaagaaccagtgggaaaaagcccagaacaacattaacgcagccaggaaggaatcg
cctctgaagagcccccaaatcatcccatcgagtcccacgccccaatcgcccatcaaccac
aacggccagatacccagcgccgtggtccttcccaatgccacccatgcctacaacatgtcc
ttctcaaattccaatgcccacaaggcagaaaggaaggtgcagaacatagaaatgtccatc
ccaggccattctgggaagaaggaacagctgcgagccgttgaggcaaggaacacattgaat
gaccttctgaaacatctcaatgaaggtggtaccaactcgaaaactatcttgggggacata
cctatgactcgccaaaatttaatgctgggtccaatgtccaaaattgtagaggtcccaccc
aaagtcccaaaccgggaggcttcactctattcgccttcctcgactcttccgagacatagt
cccaccaagcgggtggatgttccgtcaacctccaacatccagctgtcgagtttagagaga
gagagagatcggggctatcccagaaattcgtcgcagaggcactccatatcggtgctcccc
aaaaatgttatcagctcgttgaacggagccatgttgtcacggcaccccagttttaaccgg
gggggctatttccccccggctccgcccatgaggatggattctgtgcacgggactccgcta
gttattcagcccacctcactgtcccgccagagcagctactcaagcagtggcactctgccc
aggtcgggaataaagagaacaccctccataaaaccagacgtgccaccaaaaccatccttt
ggccagcccacgtccccagtcacatcactgcagaagtacacttactaa
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