Leucoraja erinaceus (little skate): 129712594
Help
Entry
129712594 CDS
T09122
Name
(RefSeq) myelin expression factor 2-like isoform X1
KO
K12887
heterogeneous nuclear ribonucleoprotein M
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129712594
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
leri03041
]
129712594
Spliceosome [BR:
leri03041
]
Common components
Common spliceosomal components
hnRNP proteins
129712594
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_MARF1
RBD_DEAH11
RRM_3
Motif
Other DBs
NCBI-GeneID:
129712594
NCBI-ProteinID:
XP_055517109
LinkDB
All DBs
Position
33:complement(7149013..7181802)
Genome browser
AA seq
627 aa
AA seq
DB search
MGGKIRKKRLGKEKGCVVEFKTEDLVAKALDVMNNYELDGRELNIKQDAEGEHARKAVQR
GGGGSYHGGPRPDISSSVLNLPLHLINNPNIPAEVLNALQAGRLLPTVFVANLDFKVGWK
KLKEVFAMAGTVKRANVKEGRDGKSRGLGTVTFELPLEAIQAVAMFNGQLLLDRPMLVKM
EARSLPHDDFCSVAQIPQLPSGLGGIGMGLGLSGQPIVVNEIKMNNAMGIMASGGSGMDG
TASGGINQMGGGISGSTGFSGDMGVMNNVGGYGGGPMGSMGNMDRMAGMGTVENFKGNMA
PGMGNMGGMGSNMSAVGGMGSGVAGMGSSMGEMYRAGMASNAMGGSSDREFGRSDLGVNR
GFGDSFGGMGGGMGGNFGGPMCGGMGNTCMDIMASALRGGMGGNFGGPMCGGMGNTCMDI
MASALRGGMGGNFGGPMCGGMGNACMDPMASALRGGMGGNFGGPMCGGMGNACMDPMASA
LSVLAAMNSMAGGMAMGMDCMGSNLDRMGPGMGPGMGAGTEMNMNHGFGSVNTGSMGSGL
NDRSSGFQSSQIFVRNLSYNLTWQKLKERFDKFGQVVFAEIKMENGKSKGCGIVRFDSPE
VAKKACILMNGAKINGRVIDVRMDPNA
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgggtggcaagatcagaaaaaagaggttggggaaggaaaaaggctgtgttgtggaattc
aaaacagaagatttagtcgcaaaggctttggatgttatgaacaactatgaacttgatgga
agagagcttaacataaagcaggatgctgaaggagaacatgctcgcaaagcggtgcagcgt
ggaggaggtggttcataccatggtggacctaggccagatatcagttcatcagttctgaat
ttgccacttcatcttatcaacaatccaaacatacctgccgaagttctcaacgcgctgcag
gctggacgattattaccaactgtatttgttgccaatcttgattttaaagtgggttggaaa
aagctgaaagaagtatttgccatggctgggacggtaaaacgtgcaaatgtcaaagaaggc
agagatggcaagagccgtggcttagggactgtgacattcgaactgccgctcgaagccatt
caagctgtcgctatgtttaatggacagctcttgcttgacagaccaatgcttgtgaaaatg
gaagccagatcccttccacatgatgacttttgttctgtggcccagattcctcaattgcct
agtggactcggtggcattggaatgggacttggacttagtggccagccgattgttgtgaat
gaaataaaaatgaacaatgcaatgggcatcatggcatctggaggaagtggaatggatgga
actgcctctgggggaataaaccaaatgggtggaggaataagtggttccactggtttcagt
ggtgatatgggcgtgatgaacaatgtaggaggctacggtggtggacccatgggaagcatg
ggcaacatggatcgaatggcaggtatgggtacagttgaaaacttcaaaggaaatatggcc
ccaggaatgggaaacatgggaggaatgggcagcaacatgagtgctgttggcggaatgggc
agtggtgtggctggaatgggaagcagtatgggagaaatgtatcgtgctggaatggcatcc
aatgctatgggtggtagttctgatcgagaatttggaagaagtgatctgggtgtgaatcgt
ggttttggggattcatttggtggaatgggaggtggaatgggtggaaatttcggaggaccc
atgtgcggcggaatggggaacacttgtatggacataatggcttctgcattaagaggtgga
atgggtggaaatttcggaggacctatgtgcggcggaatggggaacacttgtatggacata
atggcttctgcattaagaggtggaatgggtggaaatttcggaggacctatgtgcggcgga
atggggaacgcttgtatggacccaatggcttctgcattaagaggtggaatgggtggaaat
ttcggaggacccatgtgcggcggaatggggaatgcttgtatggacccaatggcttctgca
ttaagtgtattggctgctatgaatagcatggctggaggcatggcgatgggtatggattgc
atggggtccaatcttgatcgaatgggaccgggaatgggacctggaatgggagcagggact
gaaatgaatatgaatcatggatttggaagtgtgaacacgggatcaatgggaagtggatta
aatgaccgttcaagtggttttcaaagctctcagatctttgtaagaaatctttcttataat
ttaacatggcagaagctaaaggaaaggttcgataaattcggtcaagtagtttttgcagaa
ataaaaatggaaaatggcaagtccaaggggtgtgggattgtgcggtttgattccccagaa
gttgcaaaaaaagcctgcatactgatgaacggcgcaaagattaatgggagagtgatagat
gtgcgcatggatcccaatgcgtga
DBGET
integrated database retrieval system
