Leucoraja erinaceus (little skate): 129712679
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Entry
129712679 CDS
T09122
Symbol
usp8
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 8 isoform X1
KO
K11839
ubiquitin carboxyl-terminal hydrolase 8 [EC:
3.4.19.12
]
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri04137
Mitophagy - animal
leri04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
129712679 (usp8)
04137 Mitophagy - animal
129712679 (usp8)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
leri01002
]
129712679 (usp8)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
leri04131
]
129712679 (usp8)
04121 Ubiquitin system [BR:
leri04121
]
129712679 (usp8)
Enzymes [BR:
leri01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
129712679 (usp8)
Peptidases and inhibitors [BR:
leri01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
129712679 (usp8)
Membrane trafficking [BR:
leri04131
]
Endosome - Lysosome transport
Others
Others
129712679 (usp8)
Ubiquitin system [BR:
leri04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
129712679 (usp8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
USP8_dimer
WW_USP8
UCH_1
Rhodanese
Motif
Other DBs
NCBI-GeneID:
129712679
NCBI-ProteinID:
XP_055517277
LinkDB
All DBs
Position
33:11360215..11393242
Genome browser
AA seq
1087 aa
AA seq
DB search
MPAVSSDVKKLYVSTCLADLNKKAEVKLEKKSTKSIVASACKIFKAAEESRLDRDEERAY
VLYMKYLTIYDIIRKRNDYKHQQDYYVSLLGPTSFRKALEEAERLSESLKLRYEEAEVRK
KLEENDRLQEEKCKEQEETKSKGQDYNLAAATRGSSGQVEKGNVKGDSVLSDKSELIAGS
PRDTISAEKLFAMLQDGNTEVIIMDARSSKDYQESHIHMARSCCISVPEEAINPGITVNQ
IELRLPEESKETWRKRQFVDYIILLDWLSSINQLTRGTVLQSLKDALYKWDSQVVLRSEP
MVLEGGYDSWLRCYPMYTTNPKVAVPKEESSTAVQVSLNFSYPSLEEPPPLQPPPADHDE
VEAFQELGSFNGSIAELEGITKEVSIEPIANGVPGPKVSVSTGVLPVAVKTIPQIDRTKK
PALKMPERSHPKSDIAGTESLPVHNGPVIPDRSTKPFVEPQNPLTDEEISQIHAEAAQIK
EKARKEKEQRGRRQEEQRKKEQSERDKEKEQQEEEEKELKLKAELDKQSKETEEHRRQEQ
EDKGLKEEDERKLLAEQVKKSLEEKGKTEGQKKEQADMRKEAEEQSVPEPEASSSSREKQ
EPRDMLTRARSEEMGRTVPGLPPGWMKFLDVVTGTYRYYHSPTNAVHMYPPEMVPSITPP
TTPPTHKAKPQSATDADVPKLKRSYSSPDIAQAIHDEQRKVITIKPVPTINRETKPAVCS
KTEISSPSASQIRNLNPVYGGLGRALTGLRNLGNTCYMNSILQCLCNTPRLAEYFNKNCY
QRDINRSNILGHKGEVAEEFGIIMKTLWSGQYKCISPRDFRGRIGKINETFGEYAQQDSQ
ELLLFLMDGLHEDLNEAEKKRYKEDNNDNLDDTRAADLAWTKHKCLNKSIIVTLFQGQFK
STVQCLTCHKRSRTFEAFMYLSLPLPSSSKCSLQDCLKSFSKEEKLTDNNRFHCSNCKAH
RDSTKKLEIWKLPPILLVHLKRFSYEGRWKQKLQTNVDFPLENLELSNYVIGPKNNVKKY
NLFAVSNHYGGLDGGHYTAYCKNAVKQRWFKFDDQDVSEISSSSVRSSAAYILFYSSLEL
CVADLAT
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcagtttcaagtgatgtgaagaaattgtatgtgtctacgtgtttggctgatctc
aataagaaagcagaagtgaaactggaaaagaaaagcactaaaagcattgttgcaagcgcc
tgtaaaattttcaaggctgcagaagaaagtaggttggacagagatgaagaaagagcctat
gttctttacatgaagtatttaactatatatgatataattcggaaaaggaacgattataaa
catcagcaggactactatgtttctttacttggcccgacaagcttccgaaaagccttagaa
gaagcagaaagactttctgaaagcctgaaattaagatatgaggaagctgaagtacgtaaa
aagcttgaagaaaatgataggctgcaagaagagaaatgcaaagagcaagaagaaacaaaa
agcaagggacaagactacaatttagcagcagcaaccagaggttcttcaggccaggttgag
aaaggaaacgttaagggtgacagtgtgctgagcgacaaatcagaactcattgcaggttca
cctcgagacacaattagtgcagaaaaattgtttgcaatgctgcaagatggaaacactgag
gtgatcattatggatgcacggagctccaaggattaccaggaatctcacatacacatggcc
aggtcatgttgtataagtgtgccggaggaagctatcaatccaggaatcactgtcaaccag
atagagttgagactgccagaagaatcaaaggagacatggcggaagcggcagtttgttgat
tacattattttgttggattggttaagttccatcaaccagttgacaagaggaactgttctt
cagagtctcaaagatgcactttacaagtgggatagccaggtagttcttcggagtgaacca
atggtattggagggtggctatgacagttggcttcgctgctacccaatgtataccaccaat
cccaaagtggctgttccaaaggaagaatcctctactgctgtccaagtgtccttgaacttt
agttatccatctttggaggaaccaccacctcttcaaccacctcctgcagaccatgatgaa
gtggaggctttccaagaattgggaagttttaatggaagcatcgctgagttggaagggatt
acaaaagaagtcagcatagaaccaattgctaacggagttcctggtccgaaagtttcagta
tcaactggtgtgctgcctgttgcagtgaaaaccattccacagattgatcgaactaagaaa
cctgcactaaaaatgccagagaggtctcatcccaaatctgacattgctggtacagagagc
ctgccagttcacaacggaccagtgataccagatcggtcaacaaagccatttgtggaacca
caaaaccctttaacagatgaagaaataagtcagatccatgctgaagcagcgcagattaag
gagaaggccagaaaggaaaaagaacagcgtggacgcagacaggaagagcaaagaaaaaag
gagcaatcggagagagataaggaaaaagagcagcaagaggaagaagaaaaagagctcaaa
ctaaaagcagagcttgacaaacagagcaaagaaaccgaagagcatagaagacaggaacag
gaagacaaggggctgaaagaggaagatgaaaggaaactattagcagagcaagtcaagaag
tctctggaagaaaagggtaaaactgaaggtcagaaaaaagagcaagcggatatgaggaaa
gaagcggaagagcaatctgtacctgagccagaggccagcagctccagtagagaaaagcag
gaacctcgagatatgttaaccagagcaagaagtgaagaaatgggtcggactgttccaggc
ctgccaccaggatggatgaagtttcttgatgtggtgactggaacctaccgatactatcat
tcaccgaccaatgctgttcacatgtacccacctgagatggtgccatcgatcacaccacct
acaacccctccaactcataaagccaaaccacaaagtgcaacagatgctgatgtccccaaa
ctgaaacgctcctactcctcgccggatattgctcaagcaattcacgatgagcaaaggaag
gtgataacaatcaaaccggtgcccacaatcaatcgggaaacaaaacctgctgtctgcagc
aaaactgaaatctcaagcccttcagcttctcaaatccgaaacttaaatcctgtgtacgga
ggcttgggtcgggccctgactggtctacgcaaccttggcaacacctgctacatgaattcc
atcttgcagtgtttatgtaacactccacgactggctgagtacttcaataaaaattgttac
caacgagatataaacaggtcaaacattcttggtcataaaggtgaggttgctgaagagttt
ggtataataatgaagactttgtggtcaggacaatacaaatgcatcagtccaagagacttc
cgggggcgcattggaaaaataaatgaaacgtttggagagtatgcgcagcaggattcccag
gaactactcctttttctcatggatgggcttcacgaagatctaaatgaagctgaaaagaaa
cggtacaaagaggataataacgacaacttggatgatacaagagcagctgatctggcctgg
acgaagcacaaatgtctcaacaaatccataatagttaccttgttccaaggccagtttaaa
tcaacagtacagtgtctgacttgtcataagaggtcacgaacgtttgaggccttcatgtat
ctatctctgccacttccttcttccagcaagtgttctctgcaggattgtctcaaatcattt
tccaaagaagagaaactcacagacaacaatcgcttccattgtagcaattgtaaggctcac
cgtgattccacaaagaagctagagatctggaaactgccccccattctactggtgcatctg
aaacgattctcttacgaaggaagatggaaacagaagttgcagacaaatgttgactttcct
ttggagaatctggagctgtcaaactatgtgattggtccaaagaacaatgtgaaaaaatac
aatttattcgcggtgtcgaatcattatggaggactagatggagggcactacacagcatac
tgcaagaatgcagtgaagcagcgctggttcaagtttgatgatcaagatgtttcggagata
tcttcttcctcggtgaggtcttcagctgcttacattctcttctacagttcattggagctc
tgtgtagccgacttagctacataa
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integrated database retrieval system
