Leucoraja erinaceus (little skate): 129712764
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Entry
129712764 CDS
T09122
Symbol
chd2
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 2 isoform X1
KO
K20091
chromodomain-helicase-DNA-binding protein 2 [EC:5.6.2.-]
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
leri03036
]
129712764 (chd2)
Chromosome and associated proteins [BR:
leri03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
129712764 (chd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
Helicase_C
CHD1-like_C
Chromo
HDA2-3
ResIII
Motif
Other DBs
NCBI-GeneID:
129712764
NCBI-ProteinID:
XP_055517454
LinkDB
All DBs
Position
33:17659086..17780596
Genome browser
AA seq
1908 aa
AA seq
DB search
MEQSLSECDNGIECLNNVAAASGFCKSSSGQLLNPADLLARREFDRAPRRSLATHPRVAQ
DKTEPPNSPGPNTMSSQGKDPEDDGSEHSNASSNLASEESNHSASGSESGSQSESEQGSE
SNNSSSDSSGSQSQSESESAGSKLQQTASENKDKPLSKKERIADVKKMWEEYPDVYGVRR
SNRSRQEPARLNAGAEQESSENSENETPRRRGRRRATNWKNAKSEIEEDEDEELEEDGDE
EEEEVEEEEEDDDEAGSADSEPVRSVRARRPVTRRPMAKTRGKRQAARRGKKRRRDSSDE
EDDDDDTPKRQTRKCVIKNVSYKEDDDFETDSDDLIEVTGEPALEENDDSETIEKVIDSR
RGKKGAIGARTTVYAVEADGNPGADFDPEKDESEVQYLIKWKGWSYIHNTWESEESLKQQ
KVKGLKKLENFIKKEEDINQWLSKASPEDVEYYNCQQEMVHELNKQYRIVERVIAMKTSK
SSTSHSDASSHSSHKTPPSGQPDYLCKWMGLPYIDCSWEDGALISRNFQACIDAFHNRHS
SKTIPSKDCKVLKQRPRFVAMKTQPSYIGSEGLELRDYQLEGLNWLAHSWCKCNSVILAD
EMGLGKTIQTISFLSNLFNQLTLYGPFLLVVPLSTLTSWQREFEIWEPSMNVVVYIGDVM
SRSTIREYDWTHPQTKRLKFNVLITTYEILLKDKNVLGNINWAFLGVDEAHRLKNDDSLL
YRTLIDFRSNHRMLITGTPLQNSLKELWSLLHFIMPEKFHSWEDFEEEHGKGRENGFQSL
HRVLEPFLLRRVKKDVEKSLPAKVEQILRVEMSASQKQYYKWILTRNYKALTRGCRGSSS
SFLNIMMELKKCCNHCYLVKPCEDNEMLTNLELLHNLIKSSGKLILLDKLMTRLRERGNR
VLIFSQMVRMLDILAEYMTIKHYPFQRLDGSIKGELRKQALDHFNAEASEDFCFLLSTRA
GGLGINLASADTVIIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEDIIERA
KKKMVLDHLVIQRMDTTGRTVLDSSARPSHSTPFNKEELSAILKFGAEELFKEAEGEESE
PQEMDIDEILRLAETRENEQSVSPTDELLSQFKVANFTTMENQPEVDEKQSKEWDDIIPE
EQRKKIEEEARQKELEDIYMLPRSRSLTKKARANGSDSDAGSRRRRQRSSGSESETEESD
DEEKRPKRRGRPRTVRRDMVDGFTDAEIRRFIKSYKKFGAPLERLEGIARDAELVDKSIA
DLQRLGELIHNGCVMAVKEFEEQLKENPGLEGKGPGKKRGPTIKVSGVQVNVRSILIHED
EFEALHKTIPLDPEERKKFRLSCHAKAVHFDTDWGVEEDSNLLIGIYECGYSNWEQIKMD
PELQLTNKILPDNPDHKPQAKHLQSRADYLIRLLKKDMIKKAGIKQEKESKPKKRKPRVK
KENKAPKLKDECGNDISSPRLSDNASEEDGELKDGSLERTPMKKKLKKKDNKENKEKGDV
KKEKDGQKGKKKAKAKKDKLKADAKDKVRKSVAKGPVHITAGNDPVPIGEEGEDELDQET
FSICKERMRPVKKALKQLDKPEEGLSEKEQLQHTRSCLLKIGDRITDCLKAYSDSEHVKI
WRRNLWIFVSKFTEFDARKLHKLYKLAQKRRSQEEEEQKKKGNNSESRRQFKPEPSGSSR
DSMNSQSHMQHGPHGPHLLPPHHQHPHHRDPYPQHNKRPFNNADRGDRQRERMYNYSSQH
WPSERHHPYDQHRYKDHHFDDRRPHGDPHRNSGNYRPNNLHRKRPYNQYDDERDHRGHRD
YYDRRHQDMKRRRSDEFRPQDHHNVGHQQDFRRLPDHRGPGAYHSQGPSEHYRPFHMEKP
MEHKTLSSEHRSPLSQKSPHDSRSPHDHRSPLDRSLDTPDYNWNARKT
NT seq
5727 nt
NT seq
+upstream
nt +downstream
nt
atggaacagagcttgtcggagtgcgacaatggtatcgagtgcttaaacaatgtggctgct
gcgtcagggttttgcaagtcgagcagcgggcagctgctgaatccggcggacttgctcgct
cgccgcgagtttgacagggctccacggcgctccctcgctacccatccacgtgtagcccag
gacaaaaccgagcccccaaactcccctggccccaacaccatgtccagccagggcaaagac
ccagaagacgacggctctgagcacagcaatgcttccagcaacctggcctctgaagaatcc
aaccactctgcctccggatcagagtcgggcagtcagtctgagagcgagcaggggagcgag
tccaacaacagcagctcggattcctccgggtctcagtcccaatcggaaagcgagtcggcc
ggctccaagttgcagcagactgccagcgagaacaaggacaagccgctgagcaagaaggag
aggatagctgatgtgaaaaagatgtgggaagaatacccagatgtgtatggggttaggagg
tcaaaccgcagcagacaggaaccggctcgacttaacgctggagcagagcaggagagcagt
gaaaattctgagaatgaaactccgcggcgacgaggaaggaggagagccacaaattggaaa
aatgccaagtcggagattgaggaggatgaggacgaggagctggaggaggacggtgatgag
gaggaggaggaggtggaggaggaggaggaggatgatgatgaggccggcagtgcagacagc
gagcccgtgaggagcgtgcgggcacggcgcccagtcaccagaagacccatggccaagacc
cgggggaaaaggcaggcggcacggcggggaaagaagaggaggagggattcgtccgacgag
gaggacgatgatgatgacactcccaagcgacagacacgcaagtgtgtgatcaaaaacgtg
agttataaagaagatgatgattttgagactgattcagatgatctcatcgaagttacagga
gagccggccctggaggagaacgacgacagtgaaaccatcgagaaagtgattgactcccgc
cgtgggaaaaaaggagccatcggtgcccgaaccacggtgtacgcggtggaggcagatgga
aatccaggagcggactttgatccggagaaagatgagtcggaggtgcaatacctgatcaag
tggaagggctggtcctacatccacaacacgtgggagagcgaggagtcgctgaagcaacag
aaagtgaaggggctgaagaagttggagaacttcatcaagaaggaggaggatataaaccag
tggttgtccaaagcatccccagaagacgttgagtactacaactgtcagcaggagatggtt
cacgaactcaataagcaataccggatcgtggagagagtaatcgctatgaagacaagtaaa
tcatcaaccagccattctgacgcctcatcgcattccagccacaaaaccccgccgtccggc
cagcccgactacctgtgcaagtggatggggctgccctacatagactgcagctgggaggac
ggagcacttatttccagaaatttccaggcctgcatcgatgccttccataaccgccacagt
tccaaaactattccctcaaaagactgcaaggtgttgaaacagaggccaaggttcgtcgcc
atgaagacccagccttcctatatcggtagtgagggcttggagttgagggattaccaactt
gagggtctgaattggctcgctcattcctggtgcaagtgcaacagtgtgatcctggccgac
gaaatgggcttgggcaaaaccatccagaccatctccttcctctccaacctgttcaaccag
ctcacgctgtacggccccttcctgctggttgtcccactgtccaccctgacgtcctggcag
agagagtttgagatctgggagcccagcatgaacgtggtggtctacatcggcgacgtgatg
agccgcagcacgatcagagaatacgactggacacatcctcagacaaaacggctgaagttt
aacgtcctgataacaacatacgagatcttgctgaaggacaagaacgtgctggggaatata
aactgggcgttcctgggcgttgatgaagcccaccggctgaagaacgacgactcgctgctc
taccgcacgctgatcgacttccgctccaaccatcgcatgctgatcacgggcacgccgctg
cagaactcgctgaaggagctctggtcactcctgcacttcatcatgcctgaaaagtttcac
tcctgggaggactttgaagaagagcacggcaaagggcgggagaatggattccagagcctg
caccgggtcctggagcccttcctgctgcggcgtgtgaagaaagacgtcgagaaatccctc
cctgccaaagttgaacagattctacgggtggagatgtcagcctcacagaagcagtattac
aagtggatattgaccaggaactacaaggccctcaccaggggctgcagggggtcctcctcg
agcttcctgaacattatgatggagctgaagaaatgctgcaatcactgctacctggtcaag
ccgtgcgaggataacgagatgctaaccaacctggagttgttgcacaacctgatcaagagc
agtggcaagctgatcctgctggacaagctgatgaccaggctccgtgagcgtggaaaccgg
gtactcatcttctcacagatggtccgcatgttggatatcctcgccgagtacatgaccatt
aaacactaccccttccagcgtttagatggctctataaaaggggaattaagaaaacaagcc
ttggaccacttcaacgcagaagcatctgaggatttctgcttcctcctctccacaagagca
ggggggctcgggattaacttggcctccgctgacactgtcatcatcttcgactctgactgg
aatccacagaatgatttgcaagcacaggcccgtgctcacaggataggccaaaagaaacag
gtgaatatttaccggctggttacaaaagggacagtggaagaagatatcattgagcgagcc
aagaagaagatggtcctagatcaccttgttatccaaaggatggacacgacgggcaggaca
gtgttggacagctcagcccgcccctcacactcaacaccattcaacaaggaggagctgtcg
gccatcttgaaatttggagctgaggagctgttcaaggaggcggagggcgaggaatcagag
ccccaggaaatggacattgacgagatcctgagacttgccgaaacgagagagaatgagcaa
tccgtcagtccgacagacgagctgctctcccagttcaaggtggcaaacttcaccaccatg
gagaaccaacccgaggtggatgagaagcaaagcaaggaatgggatgacatcatcccggag
gagcagcggaaaaagattgaagaagaggcgcggcagaaggagctggaggacatctacatg
ctccccagaagcaggagtttaaccaagaaggctcgggccaacggcagtgattctgacgcc
gggtcgcggaggcggcggcagcggtcgtcggggtcggagagcgaaacggaggagagcgac
gacgaggagaagcggcccaagcgaagaggccgccctcggacggtgcgcagggacatggtt
gacggcttcaccgacgctgagatcaggaggtttatcaaaagttacaagaagtttggtgct
cctctagaacggctcgagggtatagcacgcgatgcggagctcgtggacaagtccatcgcg
gacctacaacgactgggcgaactcatacacaacggctgtgtgatggctgtcaaagagttt
gaggaacagctgaaggaaaacccaggcctggaggggaaggggccggggaaaaagaggggt
ccaaccatcaaggtttcgggagtccaggtcaacgttcggtcaattctcattcacgaggac
gaatttgaggctctgcataaaaccattcctctcgaccctgaggaaaggaagaagttccgt
ttgagctgccacgccaaggcagtgcatttcgacacagattggggtgtggaggaggattcc
aatttgctgatagggatctatgagtgtggttatagcaactgggagcagataaaaatggac
ccagaactacagcttaccaataagattctccctgataatccagatcacaagccacaggcc
aagcacctgcagtcacgggccgattacctgatcaggctgctgaagaaagacatgatcaag
aaggccggaattaaacaggagaaggagtccaaaccaaagaagcggaagcccagagtgaag
aaggagaacaaggcacccaagctgaaggatgagtgtggcaacgatatctcctcgccccgg
ctctctgacaatgcttcggaagaggatggtgagctgaaggacggcagtttggaacgaacg
cccatgaagaagaagctgaagaagaaagacaacaaggagaacaaggagaagggagatgtt
aagaaggaaaaggatgggcagaaggggaaaaagaaggccaaggccaagaaggacaagctg
aaagcggacgcgaaggacaaggtgcggaaatctgttgccaagggcccggtgcacattacg
gctggcaacgaccccgtacctatcggggaagagggagaggatgagttggaccaggagaca
ttcagcatctgcaaggagaggatgcggcctgtgaagaaggctctgaagcagctggacaag
ccggaggaggggctgtcggagaaggaacagctgcagcacacgcgcagctgcctgctgaag
atcggcgaccgcatcaccgactgcttgaaggcctacagtgactccgagcacgtcaagatc
tggagaagaaatctctggatttttgtctccaagttcaccgagtttgacgcccggaagcta
cacaagctgtacaagttggcacagaaacggcgatcccaggaagaggaggagcagaagaag
aaggggaataattcggagagcaggcgtcagttcaagccggagccatcggggtcgagtcgg
gactccatgaactctcagtcacacatgcagcatggacctcacggcccgcacctgctgcca
ccccaccaccaacacccgcatcaccgagacccctacccccagcacaacaagcgccccttc
aacaacgcagatcgaggcgatcgccagagggagcgaatgtacaactacagcagccagcac
tggccctccgagcggcaccacccctacgaccagcaccgatacaaggaccaccactttgac
gaccggcggccacacggagatccccaccgcaattccggcaattaccggcccaacaacctg
caccgcaagcggccgtataaccagtacgatgacgagcgcgaccatcgaggtcaccgcgac
tattacgacaggcgccaccaggacatgaaacgtcgccggtctgatgagtttcgacctcag
gaccaccacaacgtcgggcaccaacaagacttccgccgcttgcccgatcacagaggtccc
ggagcctaccacagccaagggccttctgaacactaccgaccctttcacatggagaagccc
atggagcacaagaccctctcctcagaacaccgctcgcccctctcccagaaatcgccgcac
gattcgaggtcaccgcacgatcacaggtccccactcgaccgctcgctggacactcccgac
tacaactggaacgcgaggaaaacgtag
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