KEGG   Leucoraja erinaceus (little skate): 129712764
Entry
129712764         CDS       T09122                                 
Symbol
chd2
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 2 isoform X1
  KO
K20091  chromodomain-helicase-DNA-binding protein 2 [EC:5.6.2.-]
Organism
leri  Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:leri00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:leri03036]
    129712764 (chd2)
Chromosome and associated proteins [BR:leri03036]
 Eukaryotic type
  Chromatin remodeling factors
   Other chromatin remodeling factors
    129712764 (chd2)
SSDB
Motif
Pfam: SNF2-rel_dom HTH_Hrp3 CDH1_2_SANT_HL1 Helicase_C CHD1-like_C Chromo HDA2-3 ResIII
Other DBs
NCBI-GeneID: 129712764
NCBI-ProteinID: XP_055517454
LinkDB
Position
33:17659086..17780596
AA seq 1908 aa
MEQSLSECDNGIECLNNVAAASGFCKSSSGQLLNPADLLARREFDRAPRRSLATHPRVAQ
DKTEPPNSPGPNTMSSQGKDPEDDGSEHSNASSNLASEESNHSASGSESGSQSESEQGSE
SNNSSSDSSGSQSQSESESAGSKLQQTASENKDKPLSKKERIADVKKMWEEYPDVYGVRR
SNRSRQEPARLNAGAEQESSENSENETPRRRGRRRATNWKNAKSEIEEDEDEELEEDGDE
EEEEVEEEEEDDDEAGSADSEPVRSVRARRPVTRRPMAKTRGKRQAARRGKKRRRDSSDE
EDDDDDTPKRQTRKCVIKNVSYKEDDDFETDSDDLIEVTGEPALEENDDSETIEKVIDSR
RGKKGAIGARTTVYAVEADGNPGADFDPEKDESEVQYLIKWKGWSYIHNTWESEESLKQQ
KVKGLKKLENFIKKEEDINQWLSKASPEDVEYYNCQQEMVHELNKQYRIVERVIAMKTSK
SSTSHSDASSHSSHKTPPSGQPDYLCKWMGLPYIDCSWEDGALISRNFQACIDAFHNRHS
SKTIPSKDCKVLKQRPRFVAMKTQPSYIGSEGLELRDYQLEGLNWLAHSWCKCNSVILAD
EMGLGKTIQTISFLSNLFNQLTLYGPFLLVVPLSTLTSWQREFEIWEPSMNVVVYIGDVM
SRSTIREYDWTHPQTKRLKFNVLITTYEILLKDKNVLGNINWAFLGVDEAHRLKNDDSLL
YRTLIDFRSNHRMLITGTPLQNSLKELWSLLHFIMPEKFHSWEDFEEEHGKGRENGFQSL
HRVLEPFLLRRVKKDVEKSLPAKVEQILRVEMSASQKQYYKWILTRNYKALTRGCRGSSS
SFLNIMMELKKCCNHCYLVKPCEDNEMLTNLELLHNLIKSSGKLILLDKLMTRLRERGNR
VLIFSQMVRMLDILAEYMTIKHYPFQRLDGSIKGELRKQALDHFNAEASEDFCFLLSTRA
GGLGINLASADTVIIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEDIIERA
KKKMVLDHLVIQRMDTTGRTVLDSSARPSHSTPFNKEELSAILKFGAEELFKEAEGEESE
PQEMDIDEILRLAETRENEQSVSPTDELLSQFKVANFTTMENQPEVDEKQSKEWDDIIPE
EQRKKIEEEARQKELEDIYMLPRSRSLTKKARANGSDSDAGSRRRRQRSSGSESETEESD
DEEKRPKRRGRPRTVRRDMVDGFTDAEIRRFIKSYKKFGAPLERLEGIARDAELVDKSIA
DLQRLGELIHNGCVMAVKEFEEQLKENPGLEGKGPGKKRGPTIKVSGVQVNVRSILIHED
EFEALHKTIPLDPEERKKFRLSCHAKAVHFDTDWGVEEDSNLLIGIYECGYSNWEQIKMD
PELQLTNKILPDNPDHKPQAKHLQSRADYLIRLLKKDMIKKAGIKQEKESKPKKRKPRVK
KENKAPKLKDECGNDISSPRLSDNASEEDGELKDGSLERTPMKKKLKKKDNKENKEKGDV
KKEKDGQKGKKKAKAKKDKLKADAKDKVRKSVAKGPVHITAGNDPVPIGEEGEDELDQET
FSICKERMRPVKKALKQLDKPEEGLSEKEQLQHTRSCLLKIGDRITDCLKAYSDSEHVKI
WRRNLWIFVSKFTEFDARKLHKLYKLAQKRRSQEEEEQKKKGNNSESRRQFKPEPSGSSR
DSMNSQSHMQHGPHGPHLLPPHHQHPHHRDPYPQHNKRPFNNADRGDRQRERMYNYSSQH
WPSERHHPYDQHRYKDHHFDDRRPHGDPHRNSGNYRPNNLHRKRPYNQYDDERDHRGHRD
YYDRRHQDMKRRRSDEFRPQDHHNVGHQQDFRRLPDHRGPGAYHSQGPSEHYRPFHMEKP
MEHKTLSSEHRSPLSQKSPHDSRSPHDHRSPLDRSLDTPDYNWNARKT
NT seq 5727 nt   +upstreamnt  +downstreamnt
atggaacagagcttgtcggagtgcgacaatggtatcgagtgcttaaacaatgtggctgct
gcgtcagggttttgcaagtcgagcagcgggcagctgctgaatccggcggacttgctcgct
cgccgcgagtttgacagggctccacggcgctccctcgctacccatccacgtgtagcccag
gacaaaaccgagcccccaaactcccctggccccaacaccatgtccagccagggcaaagac
ccagaagacgacggctctgagcacagcaatgcttccagcaacctggcctctgaagaatcc
aaccactctgcctccggatcagagtcgggcagtcagtctgagagcgagcaggggagcgag
tccaacaacagcagctcggattcctccgggtctcagtcccaatcggaaagcgagtcggcc
ggctccaagttgcagcagactgccagcgagaacaaggacaagccgctgagcaagaaggag
aggatagctgatgtgaaaaagatgtgggaagaatacccagatgtgtatggggttaggagg
tcaaaccgcagcagacaggaaccggctcgacttaacgctggagcagagcaggagagcagt
gaaaattctgagaatgaaactccgcggcgacgaggaaggaggagagccacaaattggaaa
aatgccaagtcggagattgaggaggatgaggacgaggagctggaggaggacggtgatgag
gaggaggaggaggtggaggaggaggaggaggatgatgatgaggccggcagtgcagacagc
gagcccgtgaggagcgtgcgggcacggcgcccagtcaccagaagacccatggccaagacc
cgggggaaaaggcaggcggcacggcggggaaagaagaggaggagggattcgtccgacgag
gaggacgatgatgatgacactcccaagcgacagacacgcaagtgtgtgatcaaaaacgtg
agttataaagaagatgatgattttgagactgattcagatgatctcatcgaagttacagga
gagccggccctggaggagaacgacgacagtgaaaccatcgagaaagtgattgactcccgc
cgtgggaaaaaaggagccatcggtgcccgaaccacggtgtacgcggtggaggcagatgga
aatccaggagcggactttgatccggagaaagatgagtcggaggtgcaatacctgatcaag
tggaagggctggtcctacatccacaacacgtgggagagcgaggagtcgctgaagcaacag
aaagtgaaggggctgaagaagttggagaacttcatcaagaaggaggaggatataaaccag
tggttgtccaaagcatccccagaagacgttgagtactacaactgtcagcaggagatggtt
cacgaactcaataagcaataccggatcgtggagagagtaatcgctatgaagacaagtaaa
tcatcaaccagccattctgacgcctcatcgcattccagccacaaaaccccgccgtccggc
cagcccgactacctgtgcaagtggatggggctgccctacatagactgcagctgggaggac
ggagcacttatttccagaaatttccaggcctgcatcgatgccttccataaccgccacagt
tccaaaactattccctcaaaagactgcaaggtgttgaaacagaggccaaggttcgtcgcc
atgaagacccagccttcctatatcggtagtgagggcttggagttgagggattaccaactt
gagggtctgaattggctcgctcattcctggtgcaagtgcaacagtgtgatcctggccgac
gaaatgggcttgggcaaaaccatccagaccatctccttcctctccaacctgttcaaccag
ctcacgctgtacggccccttcctgctggttgtcccactgtccaccctgacgtcctggcag
agagagtttgagatctgggagcccagcatgaacgtggtggtctacatcggcgacgtgatg
agccgcagcacgatcagagaatacgactggacacatcctcagacaaaacggctgaagttt
aacgtcctgataacaacatacgagatcttgctgaaggacaagaacgtgctggggaatata
aactgggcgttcctgggcgttgatgaagcccaccggctgaagaacgacgactcgctgctc
taccgcacgctgatcgacttccgctccaaccatcgcatgctgatcacgggcacgccgctg
cagaactcgctgaaggagctctggtcactcctgcacttcatcatgcctgaaaagtttcac
tcctgggaggactttgaagaagagcacggcaaagggcgggagaatggattccagagcctg
caccgggtcctggagcccttcctgctgcggcgtgtgaagaaagacgtcgagaaatccctc
cctgccaaagttgaacagattctacgggtggagatgtcagcctcacagaagcagtattac
aagtggatattgaccaggaactacaaggccctcaccaggggctgcagggggtcctcctcg
agcttcctgaacattatgatggagctgaagaaatgctgcaatcactgctacctggtcaag
ccgtgcgaggataacgagatgctaaccaacctggagttgttgcacaacctgatcaagagc
agtggcaagctgatcctgctggacaagctgatgaccaggctccgtgagcgtggaaaccgg
gtactcatcttctcacagatggtccgcatgttggatatcctcgccgagtacatgaccatt
aaacactaccccttccagcgtttagatggctctataaaaggggaattaagaaaacaagcc
ttggaccacttcaacgcagaagcatctgaggatttctgcttcctcctctccacaagagca
ggggggctcgggattaacttggcctccgctgacactgtcatcatcttcgactctgactgg
aatccacagaatgatttgcaagcacaggcccgtgctcacaggataggccaaaagaaacag
gtgaatatttaccggctggttacaaaagggacagtggaagaagatatcattgagcgagcc
aagaagaagatggtcctagatcaccttgttatccaaaggatggacacgacgggcaggaca
gtgttggacagctcagcccgcccctcacactcaacaccattcaacaaggaggagctgtcg
gccatcttgaaatttggagctgaggagctgttcaaggaggcggagggcgaggaatcagag
ccccaggaaatggacattgacgagatcctgagacttgccgaaacgagagagaatgagcaa
tccgtcagtccgacagacgagctgctctcccagttcaaggtggcaaacttcaccaccatg
gagaaccaacccgaggtggatgagaagcaaagcaaggaatgggatgacatcatcccggag
gagcagcggaaaaagattgaagaagaggcgcggcagaaggagctggaggacatctacatg
ctccccagaagcaggagtttaaccaagaaggctcgggccaacggcagtgattctgacgcc
gggtcgcggaggcggcggcagcggtcgtcggggtcggagagcgaaacggaggagagcgac
gacgaggagaagcggcccaagcgaagaggccgccctcggacggtgcgcagggacatggtt
gacggcttcaccgacgctgagatcaggaggtttatcaaaagttacaagaagtttggtgct
cctctagaacggctcgagggtatagcacgcgatgcggagctcgtggacaagtccatcgcg
gacctacaacgactgggcgaactcatacacaacggctgtgtgatggctgtcaaagagttt
gaggaacagctgaaggaaaacccaggcctggaggggaaggggccggggaaaaagaggggt
ccaaccatcaaggtttcgggagtccaggtcaacgttcggtcaattctcattcacgaggac
gaatttgaggctctgcataaaaccattcctctcgaccctgaggaaaggaagaagttccgt
ttgagctgccacgccaaggcagtgcatttcgacacagattggggtgtggaggaggattcc
aatttgctgatagggatctatgagtgtggttatagcaactgggagcagataaaaatggac
ccagaactacagcttaccaataagattctccctgataatccagatcacaagccacaggcc
aagcacctgcagtcacgggccgattacctgatcaggctgctgaagaaagacatgatcaag
aaggccggaattaaacaggagaaggagtccaaaccaaagaagcggaagcccagagtgaag
aaggagaacaaggcacccaagctgaaggatgagtgtggcaacgatatctcctcgccccgg
ctctctgacaatgcttcggaagaggatggtgagctgaaggacggcagtttggaacgaacg
cccatgaagaagaagctgaagaagaaagacaacaaggagaacaaggagaagggagatgtt
aagaaggaaaaggatgggcagaaggggaaaaagaaggccaaggccaagaaggacaagctg
aaagcggacgcgaaggacaaggtgcggaaatctgttgccaagggcccggtgcacattacg
gctggcaacgaccccgtacctatcggggaagagggagaggatgagttggaccaggagaca
ttcagcatctgcaaggagaggatgcggcctgtgaagaaggctctgaagcagctggacaag
ccggaggaggggctgtcggagaaggaacagctgcagcacacgcgcagctgcctgctgaag
atcggcgaccgcatcaccgactgcttgaaggcctacagtgactccgagcacgtcaagatc
tggagaagaaatctctggatttttgtctccaagttcaccgagtttgacgcccggaagcta
cacaagctgtacaagttggcacagaaacggcgatcccaggaagaggaggagcagaagaag
aaggggaataattcggagagcaggcgtcagttcaagccggagccatcggggtcgagtcgg
gactccatgaactctcagtcacacatgcagcatggacctcacggcccgcacctgctgcca
ccccaccaccaacacccgcatcaccgagacccctacccccagcacaacaagcgccccttc
aacaacgcagatcgaggcgatcgccagagggagcgaatgtacaactacagcagccagcac
tggccctccgagcggcaccacccctacgaccagcaccgatacaaggaccaccactttgac
gaccggcggccacacggagatccccaccgcaattccggcaattaccggcccaacaacctg
caccgcaagcggccgtataaccagtacgatgacgagcgcgaccatcgaggtcaccgcgac
tattacgacaggcgccaccaggacatgaaacgtcgccggtctgatgagtttcgacctcag
gaccaccacaacgtcgggcaccaacaagacttccgccgcttgcccgatcacagaggtccc
ggagcctaccacagccaagggccttctgaacactaccgaccctttcacatggagaagccc
atggagcacaagaccctctcctcagaacaccgctcgcccctctcccagaaatcgccgcac
gattcgaggtcaccgcacgatcacaggtccccactcgaccgctcgctggacactcccgac
tacaactggaacgcgaggaaaacgtag

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