Leucoraja erinaceus (little skate): 129712860
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Entry
129712860 CDS
T09122
Name
(RefSeq) LOW QUALITY PROTEIN: alpha-internexin-like
KO
K04573
neurofilament medium polypeptide (neurofilament 3)
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
leri04812
]
129712860
Cytoskeleton proteins [BR:
leri04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type IV
129712860
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Motif
Other DBs
NCBI-GeneID:
129712860
NCBI-ProteinID:
XP_055517564
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Position
34:complement(399975..407452)
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AA seq
872 aa
AA seq
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MSFGWDLLDAYPSRRLPRDMGVRTPAWSLKHSPLSASRGLGSPLHKSPDSLHLLPPGALA
EDLAALGSNEKLQMQGLNDRFAGFIDKVRQLEQLNHGLEAEIAGLRERQSRQSGLAAGYE
PEMSELRNLLVEAEKQKVQFMLESEQVRESAQRLAERCEAEARARVDTQASVQACNTERD
NSTMATLELQRKAQSLMDEIAFLKSTHDEEVSDLYSHIQAAQVSVEARDVAKADLAGALR
AIRAQMEGCSSDNMGQTEQWFDARVAKLNQAAAMNRDALQSTRQELSEYSRQVQSRDIEL
QTMRARKESLEKQLGDVETRHDSDLVGYQDAIQQLDNELKNTKREMVLHLREYQELLNVK
MALDVEIASYRKLLEGEETRFGDYTPSTYTYKPQPLTHATYMPTKTKATSTKVMPQYRFV
EEIISATTKEVNMAELESDYKIVMGQDGETQGEAAEREGDVDKEPSEAGEAAEEGEEAEE
VEDKGGEEEAKGDVEEEEKDEEEVTEQKDEVDTGEDKVEEAEEDQVGKDGEVEKEEEQVE
EEVKEEGVKVEVKEEEVKEDEVKDVKEDEVKEDEVKEDEVKEDEVKEDEAEGKEEKLKEE
ETVEVKDEEAKEKVEEKAVKEKVEEVKEKTEEEKADIKDGEKVEEKAEEQKAEEKEEEKV
EEKVEVKDKAEEKVEEKVEQKEEVKDKAEEKEEVKVEEKEEVKDKAEEKEEVKVEEKEEV
KDKAEEKEEEKREGKRRRSKGEAEEKVEEKAEEKKAEGKAEEVVEEKAEEKKEEKAEGKV
EEKISEQKAEAKVISKTKEGEGVTGASVVKGGDQVEDKLMGKDEKAKVPDTKVAGGESQL
TSGTKPMNGKETVTETETKDEAASTENGQGTQ
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atgagtttcggctgggacttacttgatgcttacccatccaggagactaccccgggacatg
ggggtccgcactccggcctggtccctcaagcacagccccttgtccgctagccgcggcctc
ggctccccgctgcacaagtccccggacagcctgcacctgttaccgcccggagcgctggcc
gaagacctggccgcgctcggcagcaacgagaagctacagatgcagggactaaacgaccgc
tttgccggcttcatcgacaaggtgcggcaactggagcagctgaaccacgggctggaggcc
gagatcgcagggttgagggagcggcagagccgccagtccggactggccgctggctacgag
cccgaaatgtccgagttacggaacctcctagtggaagcggagaagcagaaagtacagttt
atgttggagagtgagcaggtgcgggaaagcgcacagcgactggccgagaggtgcgaggct
gaggcgcgggcacgtgtggatacacaggctagtgtccaggcatgtaatactgagcgggac
aacagtactatggccacactcgagctgcagcgtaaagcgcagtcgctaatggacgagatc
gccttcctgaagagcacccacgatgaggaggtgtccgacctgtacagccacatccaggca
gcgcaggtgagcgtggaggcgagggatgtggccaaggctgacctggcgggagccctgcgg
gcgatccgggctcagatggaaggctgcagcagcgacaacatgggccagaccgagcagtgg
ttcgatgcccgtgtggccaagctgaaccaggcggcggcgatgaacagagacgccctacag
agcacacggcaggagctgagcgaatacagccgccaggtgcagtcccgggacatcgagcta
cagaccatgcgggcgaggaaggagtcgctggagaagcagctgggcgacgtcgagacccga
cacgactccgatctagtcggctatcaggacgccatccaacaactagataacgaactaaaa
aatacaaagcgggaaatggtactgcatctgcgggaataccaggagcttctgaacgtgaag
atggccttggatgtggagattgcctcttacaggaaactgcttgaaggggaagagacaaga
ttcggtgactacacaccctcaacatatacttacaaaccacagccattaacacatgcaacc
tacatgccaaccaagaccaaagccacctcaacaaaggtcatgcctcagtacaggtttgta
gaagaaatcattagtgcaacaaccaaggaagttaacatggcagagttggaatctgattac
aagatagtgatgggtcaggatggagaaacacaaggcgaggcagcagaaagagagggagat
gtggacaaggaaccaagtgaagcaggagaagctgcagaggaaggagaggaagccgaggag
gtagaagataaaggcggggaagaagaggcaaagggggatgttgaagaagaggaaaaagat
gaagaggaggttacagaacaaaaggatgaagtggatacaggtgaagataaggttgaagag
gcagaagaggatcaggtaggaaaggatggagaggttgagaaggaggaggaacaggtggaa
gaggaggtcaaagaggagggggtcaaggtggaagtcaaagaggaggaggtcaaagaggat
gaggtcaaagatgtcaaagaggacgaggtcaaagaggacgaggtcaaagaggatgaggtc
aaagaggacgaggtcaaagaggatgaggctgaaggaaaggaagagaagcttaaagaggaa
gagacggttgaagtaaaggatgaagaggctaaagaaaaggttgaagagaaagcagtaaag
gaaaaggttgaggaggttaaagagaagactgaagaggaaaaggctgacataaaagatgga
gagaaagttgaagagaaggctgaagagcaaaaagctgaagagaaggaggaagagaaggtg
gaagagaaggtggaagtaaaggataaagctgaagagaaggtggaagaaaaggtggaacag
aaggaggaagtaaaggataaagctgaagaaaaggaggaagtaaaggtggaagagaaggag
gaagtaaaggataaagctgaagaaaaggaggaagtaaaggtggaagagaaggaggaagta
aaggataaagctgaagaaaaggaggaagagaaaagagaagggaagagaaggaggagtaaa
ggagaagctgaagagaaggtggaagagaaggcagaagagaagaaagctgaagggaaggca
gaagaggtggtggaagaaaaggcagaagagaagaaagaagagaaagcagaaggaaaggtt
gaagaaaagatttctgaacaaaaggctgaagcaaaagtcatttctaagacaaaggaaggt
gaaggtgtaacgggagcatcggtggtgaaggggggcgatcaggttgaggataagctaatg
ggcaaggatgaaaaggcaaaagtgccagacaccaaagtagcaggaggggagagccagtta
acttcaggaaccaagccaatgaatggtaaagaaacagtgacagagactgagaccaaggat
gaagcagcttccacagagaacggccaggggacacagtaa
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