Leucoraja erinaceus (little skate): 129712889
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Entry
129712889 CDS
T09122
Symbol
polr3a
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri03020
RNA polymerase
leri04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
129712889 (polr3a)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
129712889 (polr3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
leri03021
]
129712889 (polr3a)
Enzymes [BR:
leri01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
129712889 (polr3a)
Transcription machinery [BR:
leri03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
129712889 (polr3a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
129712889
NCBI-ProteinID:
XP_055517600
LinkDB
All DBs
Position
34:complement(2050606..2088816)
Genome browser
AA seq
1370 aa
AA seq
DB search
MKSAKEMRQQAHIQVVSKNLYSQDNNHTPLSNGVLDHRMGTSEKDRPCETCGKNLADCIG
HYGYIDLELPCFHVGYFKAIIGILQMICKICSRVMLSAEERKLFLDALKKPGLTYLQKRG
LKKKISEKCRKKTICLFCGAFNGPVKKCGLLKIIHEKYKTNKKVMDPVVSDFLQSFDIAI
EHNKEMEALLGRAQENLNPLVVLNIFKRIPSEDVPLLLMNLEAGKPADLVLTRLLVPPLC
IRPSVVSDLKSGTNEDDLTMKLTEIIFLNDVIKKHRMSGAKTQMIMEDWDFLQLQCALYI
NSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKRVDFSSRTVISPDPNLRIDEVA
VPVHVAKILTYPERVTKANLELLRKLVCSGPEVHPGANFIQQRHTNLKRFLRYGNREKMA
QELKYGDIVERHLIDGDIVLFNRQPSLHKLSIMAHIAVVKPHRTFRFNECVCTPYNADFD
GDEMNLHLPQTEEAKAEALILMGTKANLVTPRNGEPLIAAIQDFLTGAYLLTMKDTFFDR
AKTCQIVASILAGKDERIKISLPHPAIVKPVTLWTGKQIFSLILKPNKDCPINANLRTKG
KQYCGKGEDLCFNDSFVVIQNSELLAGSLDKGTLGSGSKNNIFYILLRDWGQMAAADAMS
RLARLAPVYLSNRGFSIGIGDVTPGRGLLKAKQELLDAGYMKCDEFIQALNTGKLQQQPG
CTAEETLEALILKELSVIRDHAGSACLRELDKSNSPLTMALCGSKGSFINISQMIACVGQ
QAISGSRVPDGFENRSLPHFEKHSKLPAAKGFVANSFYSGLTPTEFIFHTMAGREGLVDT
AVKTAETGYMQRRLVKSLEDLCTQYDLTVRSSTGDIIQFIYGGDGLDPAAMEGKDEPLEF
KRVLDNIRAIYPSPNEPPLSKNEVILTSEAIMKRSEFMCCQNEYLQAIRNFIKEFSDKIK
KTRDKYGINDSGTTEPRVLYQLDRITPTQINKFLETCRDKYMRAQMEPGSAVGALCAQSI
GEPGTQMTLKTFHFAGVASMNITLGVPRIKEIINASKSISTPIITAHLVQDDDADFARLV
KGRIEKTLLGEISEYIEEVFLPDDCFILIKLSLERIRLLRLEVNAETVRYSICTSKLRVK
PGDIAVHGEAVVCVTPRENSKSSMYYVLQYLKEELPKIVVQGIPEVSRAVIHIDEQCGKE
KYKLLVEGDNLRAVMATHGVKGIESTSNNTSEVEKTLGIEAARSTIIHEIQYTMKNHGMS
IDRRHVMLLSDLMTYKGEVLGITRFGLAKMKESVLMLASFEKTADHLFDAAYFGQKDSVC
GVSECIIMGIPMMNIGTGLFKLLHKADKDPDPPKRPLIFDNNEFHISLVT
NT seq
4113 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcggcaaaggagatgcggcaacaagcacacattcaggtggtcagtaagaacctg
tatagtcaagacaacaatcacacccccttgtccaacggcgtgctggatcatcgcatgggt
accagtgagaaagaccggccgtgtgaaacgtgtgggaagaatctggctgattgcatcgga
cactacggttacattgacttggaacttccctgcttccatgttggttatttcaaagccatt
attggaatcttacagatgatctgcaaaatatgttcccgtgtcatgctgtctgcagaggaa
cggaaactgtttctggatgctttgaaaaagcctggcttaacctatcttcagaaaaggggc
ctgaaaaagaaaatctctgaaaaatgtagaaagaagactatatgtctattttgtggagcg
tttaatggtcctgtgaaaaaatgtggtttgctgaaaattattcatgaaaagtacaagacc
aataagaaagtaatggatcctgtggtgtccgatttcctccagtccttcgatatagccatt
gaacataacaaagagatggaggctttgctaggcagagcacaggagaatctcaaccccctt
gtggtgttaaatatattcaaaagaattccctctgaagatgtcccactgcttctcatgaac
ctggaggcagggaagcctgcagatctggtgctcactcggttattagtcccaccactgtgc
attcgcccctcagtagtcagcgacttgaaatcaggcacaaacgaagacgacctcaccatg
aaactgacggaaatcatcttcttaaacgacgtaattaaaaagcatcgcatgtctggagcg
aagacacaaatgatcatggaagactgggacttcttacaattacagtgtgcactgtatatc
aatagtgagctctctggcattcctctcaacatggcaccgaagaaatggaccaggggattt
gtacagagactgaaaggaaaacagggtcgatttcgagggaatctgtctgggaaacgcgtg
gatttctccagcagaactgtgatttctcctgatcccaatctgcgaatagatgaagtagca
gtcccagtgcatgtggccaagatcctgacctaccccgaaagggtgacaaaggccaatctg
gaactattgcgaaaacttgtgtgcagcggacctgaagtccatccaggggctaacttcatt
cagcagcggcacactaatctgaaaaggttcctaagatatggaaacagggagaagatggca
caggaactgaaatatggtgacatcgtggaaagacatctaattgatggagatatagtgctg
ttcaataggcagccatcgctgcataaattgagcatcatggcccacatagccgtggtaaaa
ccacaccgtacattcaggttcaatgaatgcgtttgcacaccatataatgcagactttgat
ggggatgaaatgaacctccaccttcctcaaactgaggaggcgaaggcggaagcacttatc
cttatggggacaaaagcaaacttggtaactccgagaaatggcgagccactaattgcagcg
atccaagactttttaacaggtgcctatctacttacgatgaaggacactttctttgacaga
gcaaagacatgtcagattgttgcctccattctcgcagggaaagatgaacgaatcaaaatt
agtcttccacatcctgcaatcgtgaagcccgtcacactgtggacagggaagcagattttt
agtctcattctcaaaccaaacaaagactgtcctattaatgccaacctgcgcaccaagggg
aagcagtactgtggaaaaggcgaagacctctgcttcaatgactcctttgtcgtcatccag
aacagtgagctgctggctgggagcctggataaaggaactctgggctcaggatccaagaac
aatatcttctacatcttactgagagactggggacagatggcagctgcagatgcaatgtct
cgtcttgctcgcctggctcccgtctacctttccaatcggggattttccattggtattggc
gatgttacaccagggcggggactactgaaagccaagcaggagctacttgatgctggctac
atgaaatgtgatgaattcattcaagccctcaatacaggcaaacttcaacagcagcctgga
tgtacagcagaagaaacattggaagccttgattctgaaggagctctctgtaattcgagac
catgccggtagtgcttgcctcagggagttggataaaagcaacagcccactcaccatggcc
ctctgcggttcaaaaggctccttcatcaacatctcccagatgattgcctgcgtgggacag
caagctattagtggatcccgagttcctgatggctttgagaacagatctcttcctcacttt
gaaaagcattccaagcttccggcagctaagggttttgttgcaaacagtttctattccggt
ttaactcctacggaattcatcttccacacgatggctggtcgcgagggcttggtcgataca
gcagtcaaaacggcagaaaccgggtacatgcagaggcgtctggtaaaatctttagaggat
ctttgcacgcagtatgatctcacggttcgcagctcgacaggtgacattatccagtttatc
tacggtggagatggcttggatcccgcagctatggaaggcaaggatgagccactggagttt
aaacgcgttctggataacattagggccatctatccatcccccaatgaaccgcccctgagt
aagaatgaagtgatactgacttccgaggcaattatgaagagaagtgagttcatgtgctgt
caaaatgaatatctgcaggcaatcagaaattttatcaaggaattttcagataagatcaag
aaaaccagagataagtacgggattaatgacagtggaactaccgagcctcgagttctgtat
caattggaccgaataacgcctactcaaataaataaatttctagaaacctgcagagacaaa
tacatgagagcccagatggagcccggttctgctgttggtgccttgtgtgcacagagtatt
ggagagcccggcacacagatgacactgaagaccttccactttgctggtgtagcttccatg
aacattacactgggcgtccccagaataaaagaaatcatcaacgcatcaaaatctatcagc
accccgatcatcactgcacatcttgttcaagatgacgatgctgactttgcccgcctggtg
aaaggaagaattgaaaagactttgctcggggaaatctcggagtacattgaggaggttttc
ctgccagatgactgcttcattctcatcaagctctccctggagagaatccgattactgaga
ctggaggtgaatgcagaaaccgtgcgctattccatctgcacgtcgaagctgcgagtgaaa
ccaggcgacattgcggtccatggcgaggcagtggtgtgtgtcacacctcgagagaacagc
aagagttcaatgtactacgtgcttcagtatctcaaagaagagctgccgaagattgttgtc
cagggcatccctgaggtctccagggcagttattcatattgatgagcagtgtggaaaagag
aagtacaagttactggtggaaggtgataacttgcgcgcagtcatggcaactcatggagtc
aaagggattgaaagcacatcgaacaacacctcagaggtagagaaaaccttgggtatcgaa
gctgctcgatccaccatcatccacgagatccagtacaccatgaaaaatcacgggatgagc
attgacaggaggcatgtcatgcttctctcggacctgatgacttacaagggagaagtgttg
ggaataacacgattcggcttagcgaaaatgaaagagagtgttctcatgttggcatcattt
gagaaaactgcagatcacttgtttgatgcagcctactttggacagaaagactccgtttgt
ggtgtgtcagaatgcattatcatgggaatcccaatgatgaacataggaacgggactgttc
aaactgctccacaaagctgacaaggacccagacccacccaagagaccgctgatatttgac
aataatgagttccatatctcactggttacgtag
DBGET
integrated database retrieval system
