Leucoraja erinaceus (little skate): 129713018
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Entry
129713018 CDS
T09122
Symbol
sec31b
Name
(RefSeq) protein transport protein Sec31A
KO
K14005
protein transport protein SEC31
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
129713018 (sec31b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
leri04131
]
129713018 (sec31b)
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
leri02044
]
129713018 (sec31b)
Membrane trafficking [BR:
leri04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
129713018 (sec31b)
Secretion system [BR:
leri02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
129713018 (sec31b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_RIG_2nd
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40
WDR55
Beta-prop_EML
EIF3I
Beta-prop_EIPR1
Beta-prop_WDR35_TULP_N
TPR_Sec16
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
Nucleopor_Nup85
Prp18
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
129713018
NCBI-ProteinID:
XP_055517841
LinkDB
All DBs
Position
34:complement(13329833..13392072)
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AA seq
1226 aa
AA seq
DB search
MKLKEIERTAVQSWSPASHHPLYLATGTSAQQLDATFSTNAALEIYEIDFSDPSLDVKLR
GSLPATTRFHKLIWSDHGASSDGVIAAGGDTGTITLYSAEQILAAGKDPIIGQSEKHGGP
VRGLDFNPFQSNLMASGANDSEIYIWDLNNFSTPMTPGAKSQPSEDISCVAWNRQVQHIL
ASAHPSGRGVVWDLRKNEPIIKVSDHSNRMRCSGMAWNPEVATQLVLASEDDRMPVLQIW
DLRFATSPLKVLENHTRGILSISWCQADAELLLSSAKDNRILCWNPNNGEVVYELPTSSQ
WCFDVQWCPRNPAVLSAASFDGHISVYSVMGGSLEAQKQNHVDKISSSFNNLDPFGTGQT
FPPLDIPQRAVQPTMVLPLKKPPKWIRRPVGASFAFGGKLITFANPKAAAPQIQQPISRQ
VFVSVVTTETEFLCRSNELQTALRSEAFVHYCQSKISIAGTEFERNIWNFLKVNFEQDPR
TKYLNLLGYSKEGLEKQIGSSLGNSAQLKNLEVENHERAQKMPGVSSQSSSSEESIAAGD
ASTTDFFDNIPEEKPVFEIPVTGDTDGLISQALLIGNFEGAVELCLKDDHFADAIILAIA
GGEELLAQTQKRYFAKRKTKISRLVSSVVTHNWRDIVESCDLDNWKEALAALLTYAKPEV
FSSLCDALGSRLEMENDGRLCMQACLCYICSGNIEKLVECWVKTHESSTPLALEDLVEKI
MVLQKAIELLQGTDRAAEGPVFAKKLTQYASLLAAQGNLEAAMSYLPSASDQFTILQLGD
RLFHAQGEAMVGQQPPPFPFNRVLTRRPHPAASPAATAAHQTTPQRIAQQPSQQPPYQTP
FCPQAQVRPSAPAVFTPQSATSAAQFAVSAQGIAGNTTNIYSKPGTTHPAYPQHPTAISA
PAFSQYQNYGQPKIPSSGLPTYPHQQPMPGSGLTGPTQPTASLSGPTMPSVSMPGPLLMA
PASVPSYQPSSIIAPCTQPGPLSAYPGHHQHQVHHPTSLPGIHPTFPHPPGTGGPGAPSS
KPFMAATIPPPPPTGFHDGWNDPPAVRAGQRKKMLQDNYTPPAPITAPVVNFSMDTQKAR
PQGLTSQETSQGPPGAPKEGNFQPLQQLPTEKIVKKQIPEEHMILMTTFDGLVQRCLLAA
ADPQTKRKLDDAAKRLDYLYDKLREQTLSPHILSGLHEIVRNVVVCNYQQALAVHTHVVS
SSNFSEISAFMPVLKVVVTIANKLNI
NT seq
3681 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgaaagagattgagaggacagcagtacaatcctggagtccagcttcacatcat
cccctttatttggccacaggtacctcagcacaacagttggatgctaccttcagcacaaat
gcagcattagagatctatgagatagacttttcagacccatcgttggatgtaaagttgcgg
ggctctctacctgccaccaccagatttcacaaacttatctggagcgaccatggtgcaagt
tctgatggagtcattgcggctggaggggatactgggaccatcacactttatagcgcagaa
cagatccttgcagctggaaaagatcccatcatcggccagagtgagaagcatgggggccca
gtccgagggttggattttaacccctttcagagcaacctcatggcttctggagctaatgat
tctgagatatatatttgggatttaaataacttcagcacaccaatgacaccaggagcaaaa
tcacagccttctgaagacatcagttgtgtggcgtggaatcggcaagtgcagcatatcctg
gcttctgctcatccgagtggtagaggtgtggtgtgggatctgaggaagaatgaacccatc
atcaaagtcagtgaccacagcaacaggatgcgatgctctggaatggcctggaaccctgaa
gttgctactcaacttgttcttgcatctgaagacgatcgcatgcccgtgctgcaaatatgg
gacttgcgctttgccacttctcctctcaaagtgctagagaatcacaccagaggtattcta
tccatatcgtggtgtcaagctgatgcagagttgctccttagtagtgcgaaagataatagg
atcttgtgctggaaccctaacaacggagaggtagtctacgagttgccaacaagcagtcag
tggtgctttgatgtccagtggtgtcctcgtaatcctgcagttctgtcagcagcttccttc
gatgggcacatcagtgtttactctgtaatgggagggagtcttgaagcgcagaaacaaaac
catgtcgataaaatttcgtcctcattcaacaatttggacccatttggcacagggcagaca
tttcctcctctagatattcctcagagagcagttcagcccaccatggtccttcccttgaaa
aagcctccaaagtggatccggagacctgttggtgcatcatttgcttttggggggaagttg
attacttttgccaaccccaaagccgctgctccacagatccaacaaccgatttcacggcaa
gtcttcgtgagcgtggtcactacggaaactgaatttttatgccgttcaaacgagttacag
acagcactccggtcggaagcatttgtccattactgtcagtccaagattagcatcgctgga
acagaattcgaaaggaacatctggaactttttaaaggtaaattttgaacaagatcctcgc
acaaaatacttgaacctgcttggctacagcaaggaaggactggaaaaacagatcgggtca
tctctaggcaacagcgcacaactgaagaatctagaagtggagaatcatgaacgagcacag
aagatgccaggagtctctagtcagagttcgagttccgaggagtcgattgcagcaggagat
gcctcaacaactgatttctttgataatattccagaggaaaagcccgtctttgaaattcct
gtgactggagacactgatgggttaatcagccaggccttgctgataggaaactttgaaggt
gccgtcgagctgtgtctcaaagatgaccattttgctgatgccatcatacttgccattgct
gggggtgaagagcttcttgcacagacgcagaagagatactttgccaaaaggaagaccaaa
atttcacggcttgtgtcttctgtagttacccacaattggagggatattgtagaatcgtgt
gacttggacaattggaaagaagctttagctgctcttttgacttatgccaaaccagaagta
ttctcatcactatgtgatgctctcggatcgcgactagagatggagaatgatgggcggctg
tgtatgcaggcctgcctttgttacatctgctctggaaatattgagaaactggtagaatgt
tgggtgaagactcatgaaagttcaactccacttgcactagaggaccttgtggaaaagatt
atggtcttgcagaaggcaattgagttacttcagggcacagacagagctgcagagggccca
gtctttgcaaagaaactcacgcaatatgccagtttactggctgctcaaggaaacttggaa
gcagccatgagctacctcccttctgcttcagatcagtttacgatactgcagctgggtgac
aggcttttccatgctcaaggcgaggcaatggtgggtcagcagccacctccgttcccattt
aaccgggttttgacaaggagaccacatccagctgcttcacctgctgccactgcagctcat
caaacaacacctcagcgaatagcccagcaaccatcccagcagcctccatatcagaccccc
ttttgtcctcaggcccaagtccgtccatcagctccagcagtattcactccacagtctgcc
acatcagccgcccaatttgctgtctctgcccagggcattgcgggtaacaccaccaatatc
tactccaaaccaggaacaacacaccctgcctatccacaacatcctactgcaatatctgca
ccagccttttcacaataccagaattatggacagccaaaaattccttcaagtggactgccg
acctatcctcatcagcaacctatgccaggttcggggttgaccggcccaacccaacctaca
gcctcattgagcggtcctacaatgcccagtgtgtccatgccaggaccattgttaatggct
cctgcttcagtgccatcttatcaaccctccagcattattgcaccatgtacacagcctgga
ccattgtcagcttatccgggacaccaccagcatcaggttcaccatcctacatctctacca
ggaattcaccctacttttccacatccccctggaactggaggcccaggagctccttcttct
aaaccattcatggctgcgactattcctcctcctcctccaacagggttccatgatggatgg
aatgatcctccggcagtgcgggcagggcagagaaagaaaatgcttcaagacaactacact
cccccagctcctattacggctcctgttgtgaatttctctatggatacgcaaaaggcccga
ccccagggcctcacttctcaggaaaccagccaaggacctccaggggcaccaaaagagggc
aactttcagcccctgcaacaactgcccacagagaagattgtgaagaagcaaattccagaa
gagcacatgatattgatgaccacgtttgatgggctggtacaacgatgccttttagctgct
gctgaccctcagacgaagaggaagctcgatgatgctgcaaagcgactggattacctctac
gataagctgagagaacaaactctctctccacacattttaagtgggctacatgaaattgtg
cggaatgtcgtggtgtgcaattaccagcaagcgttggctgttcacactcacgttgtgagt
agcagcaacttcagcgagatctctgcattcatgcccgttctaaaagttgttgtgacaatc
gccaacaagctcaacatctga
DBGET
integrated database retrieval system
