Leucoraja erinaceus (little skate): 129713066
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Entry
129713066 CDS
T09122
Name
(RefSeq) nuclear factor NF-kappa-B p100 subunit-like
KO
K04469
nuclear factor of kappa light polypeptide gene enhancer in B-cells 2
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri04010
MAPK signaling pathway
leri04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
129713066
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
129713066
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
leri03000
]
129713066
Transcription factors [BR:
leri03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
129713066
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank
Ank_2
Ank_3
Ank_4
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
129713066
NCBI-ProteinID:
XP_055517919
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All DBs
Position
34:19010601..19116609
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AA seq
896 aa
AA seq
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MDDAYSLGTQDADGDFGQLDLNMLTNAEAALMSAGGPFIDICEQPKQRGFRFRYGCEGPS
HGGLPGASSEKNRKTYPSVKIYNYTGNAKVLVQLVTAKEPPRLHAHSLVGKQCTDEGICI
VHVGPKDMMAQFTNLGILHVTKKNVPEVLQDRIFNELYQKNPLSSQDFLSKSLLSGQELQ
SLKQESEQLAKEMDLSVVRLRFTAFLPDSQGMYTLPLPAVISDPIFDSKAPNASNLKIVR
MDKTSGCVMGGDEIYLLCDKVQKDDIQIRFYEDDERAWEAYGDFGPTDVHRQFAIVFRTP
RYWDISIERPITVFVQLKRRKDGETSEAKAFTYCPRVEDKEEVNRKRQKRLPHFSDHFGG
GGPSGVPPGIGGGGGAGAEGAGFSFLGYTSNFGGGLWTGQQGMQHATDTPGAMEMGRQAP
GATELGKEQERPHGAPAQSTECTPGEGLLPTDCPALPSDQPAHHDVLLGVGALQITERTA
RALLDYAVTADVRMLLAVQRHLTAVQDENGDTSLHLAVIHQQPLVVQQLLQVIVSIPWQN
IINLPNHLRQTPLHLGIITQQYKIVELLLTAGADAAILDRRGNSILHLALHRSDEQMVQL
LLHQLSPQLLSRLLTSSDCDGLYPVHLAVKARSEGLVELLLSKGSDGNVAEQKSGRTPLH
LAVEIQSLKLVGHLVEAGVDVDRPTFQGNTALHLAAGYGFPALTAILLGAGADRDVENYE
PLLDSEEEDDADVDISRGHTPLDITSDQKVRDILQGISCNWEEQSVKSADVQQGSIASLG
SEALGELNEVLNQEVSGADWMKLAEKLGLGSLSKLLQSAVSPSKSLLDNFDISGGTIKQL
IEALQQLGWEKAMNIIQKTDIYKALQCSDGKQSVDSAYESESQKDIDAKDNLSIAV
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgcctacagcctggggacacaggacgcggatggtgactttgggcagctggat
ctgaacatgttgaccaatgccgaggctgccctcatgtcagccggaggtccgtttatcgac
atctgtgaacagccgaagcagcgtggcttccgtttccgctacgggtgcgagggtccatca
cacggggggctgcccggggcgtccagcgagaaaaaccgcaaaacctaccccagtgtcaag
atctacaactacacgggcaatgccaaagtactcgtgcagctggtgacggccaaggagccg
ccgcgactccacgcccacagcctggtggggaaacagtgcacggacgaagggatctgcatt
gtgcatgtggggcccaaggacatgatggcacagtttactaacctgggcattctccacgtc
acaaagaagaatgttccggaggttctacaggaccggatatttaacgagctgtaccagaag
aatcctctgagctctcaggactttctcagcaagtccctgctgtcggggcaggaactgcag
agcctgaagcaggagtctgagcagttggccaaggagatggacctgagtgtggtcaggctg
cgcttcaccgccttcctccccgacagccagggcatgtacaccctgcccctcccagccgtc
atctccgaccccatcttcgacagcaaggcaccaaacgcttccaacctaaagatcgtccgg
atggacaagacctcgggctgtgtgatgggcggagatgagatctacctcctgtgtgacaag
gtccagaaagatgacatccagatccgtttctatgaggacgatgaacgcgcctgggaggca
tacggagactttggtcccacggacgtccacagacagtttgccatcgttttccggactccg
cgatactgggacatctccatcgagcggcccatcacagtgtttgtgcagctgaaacgcagg
aaggacggggagacgagtgaagccaaggccttcacctactgccccagagtggaagacaag
gaagaagtgaatcgcaagagacagaagaggcttcctcatttctccgatcactttggtgga
gggggtccctcgggagttccgccggggatcgggggtggaggaggagcgggtgctgaagga
gcgggttttagtttcctcggttacacgagtaactttggcggcgggctgtggacgggccag
caggggatgcagcatgccaccgatacaccaggagcgatggagatgggcagacaggcacca
ggagccacggaactgggcaaggaacaagaacgcccgcatggtgccccagcccagtcaacg
gagtgcaccccaggagaggggctgctgcccactgactgcccggcactgcccagtgaccag
ccggcccaccacgacgtgttgttgggcgttggcgcgctgcagatcacggagcggaccgcg
cgggcactgctggactacgccgtcacggccgatgtgcgcatgctgctggcggtgcagcga
cacctcaccgctgttcaggacgaaaatggagacacgtcgctgcacctggccgtgatccac
cagcagccactggtggtgcagcagcttctccaggtgattgtcagcattccctggcagaac
atcatcaacctgcccaaccacctgcgccagactccgctccacctggggatcatcacccaa
cagtataagattgtggagttgctgctcaccgccggcgccgatgctgccatcttggatcgc
cgtggaaactccatcctccatcttgctctgcacaggagtgacgagcagatggtgcagctg
ttgctgcatcaactctcaccgcagctactaagcaggctgctcacctcatctgactgcgac
gggctgtacccagtgcacctggcggtgaaggcgcggagcgaaggcttggtggagctgttg
ctgagcaaggggtccgatggcaacgtggctgagcagaagagcgggcggacaccactacac
ctggctgtggaaatccagagcctgaagctggtcggacatctggtggaggccggtgtggat
gtggaccgaccaacgttccaggggaacactgcgctacacctggctgccggctacggtttc
ccggccctcaccgccatactgctcggggcaggagctgatcgtgatgtggagaactatgag
ccgctgctggactctgaggaagaggatgatgcagacgtggacatcagccgtggacacacg
ccgctcgacatcaccagcgatcagaaggtgcgggatattttacaaggaatttcgtgtaac
tgggaggagcagagtgtgaagtcggctgatgttcagcaaggcagtattgcatccctgggt
tcggaagcattgggagagctgaacgaagtgttgaaccaggaagtttcaggggctgactgg
atgaaactggcagagaagctgggcctcggctcactcagcaagctgctccaaagtgctgtg
tctccaagcaagtcactgctggacaactttgatatttcaggtggaacgattaaacaatta
attgaagccctccagcagctgggctgggagaaagccatgaatattatccagaaaacagac
atttacaaagcgcttcagtgctcagatgggaagcagtcggtggacagtgcctatgaaagt
gagtcgcagaaggacatcgatgcaaaggataacttgtccatcgcagtctaa
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