Leucoraja erinaceus (little skate): 129713307
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Entry
129713307 CDS
T09122
Name
(RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri03015
mRNA surveillance pathway
leri04261
Adrenergic signaling in cardiomyocytes
leri04382
Cornified envelope formation
leri04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
129713307
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
129713307
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
129713307
09158 Development and regeneration
04382 Cornified envelope formation
129713307
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
leri01009
]
129713307
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
leri03019
]
129713307
03036 Chromosome and associated proteins [BR:
leri03036
]
129713307
Protein phosphatases and associated proteins [BR:
leri01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
129713307
Messenger RNA biogenesis [BR:
leri03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
129713307
Chromosome and associated proteins [BR:
leri03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
129713307
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR5
Beta-prop_IFT122_1st
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_HPS5
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
129713307
NCBI-ProteinID:
XP_055518247
LinkDB
All DBs
Position
35:complement(10284113..10335379)
Genome browser
AA seq
448 aa
AA seq
DB search
MAGVGSGGNDIQWCFSQVKGAIDDDVAEADVISTVEFNHSGELLATGDKGGRVVIFQQEQ
ENKSQPHCRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQQNAAQFLLSTNDKTI
KLWKISERDKRPEGYNLKEEDGRYRDPATVTTLKVPVFKPMDLMVEASPRRIFANAHTYH
INSISVNSDYETYLSADDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNQC
NTFVYSSSKGTIRLCDMRAAALCDKHAKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRY
MMTRDYLSVKIWDLNMESRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGCDSVVMT
GSYNNFFRMFDRNTKRDITLEASRENSKPRAILKPRRVCSGGKRKKDEISVDSLDFNKKI
LHTAWHPKENIIAVATTNNLYIFQDKVN
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtgttggaagtggtggcaatgacattcagtggtgtttctcgcaggtgaaggga
gcaatagacgatgatgttgcagaagctgatgttatttccacggtagaattcaaccactct
ggagaactactggcaactggggacaaggggggtagagtggtcatattccagcaggagcag
gagaacaaaagccagcctcattgcagaggtgaatataatgtttacagtacttttcagagt
cacgagccagaatttgactacttgaaaagtttagaaattgaagaaaagatcaataaaatt
agatggttaccccagcaaaatgctgcacagttcctgctctctacaaatgataaaacaata
aagttgtggaaaatcagtgaaagagataaacgaccagaaggatataatttgaaggaggag
gatggtcgatatagggatcctgccacagtcactacgcttaaggtgccggtattcaaacct
atggatttaatggttgaagcaagccctcgaagaatatttgctaatgcacacacatatcat
ataaactctatttcagtcaatagtgactatgaaacttacttatcagcagatgatcttagg
attaacctgtggcatttagaaatcacagacagaagttttaatattgtagatatcaagcct
gctaacatggaggagctgactgaagtgattacagcagcggaattccaccccaatcagtgc
aacacatttgtatacagcagtagcaagggaaccattcgactgtgtgacatgagagcagct
gccctatgtgacaaacatgccaaattgtttgaagaacctgaagatcccagcaacaggtcg
ttcttctcagaaataatttcttcaatatcagacgtcaaattcagtcacagtggtcgttac
atgatgacacgagattacctatcagtgaaaatctgggacttaaatatggaaagtagacct
gtggagacataccaggtgcatgaatacctccgaagcaaactgtgctcactgtatgaaaac
gactgtatttttgacaagttcgaatgttgttggaatggatgcgatagtgttgtcatgact
gggtcgtacaacaatttcttcagaatgttcgatagaaacacaaaacgggacattacgcta
gaggcttcgagagagaacagcaaaccacgggctatcctgaaaccacgcagggtgtgttca
gggggcaagaggaagaaggacgagattagtgttgatagtctggacttcaacaagaagatc
ctgcacacagcctggcaccctaaggaaaatatcattgccgtagccacaaccaacaacctg
tatatattccaggacaaagtgaattaa
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