Leucoraja erinaceus (little skate): 129713359
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Entry
129713359 CDS
T09122
Name
(RefSeq) LOW QUALITY PROTEIN: PDZ and LIM domain protein 2-like
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
129713359
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
leri04990
]
129713359
Domain-containing proteins not elsewhere classified [BR:
leri04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
129713359
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GFIT
Motif
Pfam:
PDZ
PDZ_6
DUF4749
LIM
DUF6288
DmmA-like_C
NinF
PDZ_2
Motif
Other DBs
NCBI-GeneID:
129713359
NCBI-ProteinID:
XP_055518332
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All DBs
Position
35:13255582..13267487
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AA seq
365 aa
AA seq
DB search
MSRSLRLPAPGPWGFSISGGRDYQTPVAVSKVMSGSKAELGELQVGDVITAINGADTSLM
IHVEARNKIRICPGDLLLHIDRTESTLPNGPAADSFVAQRFQTVLHMSENEGAEAEDKGS
WSSGGGGGRSYTPPARSHPPTHSSGHRSVSPNRRPRKPSERSPSPAVSRLSVKEVQSGSG
GRRSLSPXPTAHPEPRLTRSADSSPWGTRGRADRSLTPSPVLAGPGSPVQRGLGRVDKDS
EVYKMILENQAAKEPPKQSARFRRLLQEAMDSGREAPVPQFSSGLAPSAPRYTAPKRLVC
EQCGSVILTAAVNIQEGRYRHHECYACADCGLNLGMRGHFWFNEKMFCEKHACQRYQDQA
AESSS
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgctcgctgcggttgccggcgccgggtccctggggattcagcatcagcggcggc
cgcgactaccagacaccagtcgccgtgtccaaggtgatgtcggggagcaaggcggagctg
ggggagctccaggtgggggatgtgatcaccgccattaacggggccgacacgtcgctcatg
atacacgtggaggctcggaacaagatccggatttgccccggggacctcctgctgcacata
gacaggactgagtccactctgcccaacggacctgcagctgactcctttgttgcacagagg
ttccagactgtcctccacatgagcgagaatgagggcgcggaggcggaggacaagggatcc
tggtcatcgggagggggagggggtcgatcgtacacgccccccgcccgatcccaccccccc
acccacagctccggccacagatccgtgtccccgaatcgcagaccgcggaaaccgagcgag
aggagtccgtctcctgcagtgtcgaggctcagtgtcaaggaagtgcagtcgggaagcgga
ggacgccggagcctctcccccncccccaccgcccacccggaacctcggctgacccgctcg
gcagactccagcccctgggggacgaggggtcgcgctgaccgctccctcacccccagcccc
gtgttggccggccctgggtcacctgtccagaggggtctgggccgggtggacaaggactct
gaggtctacaagatgatccttgagaaccaggcagcgaaggagcctccgaagcagtctgct
cgcttccgccgcctcctacaggaggccatggacagtggccgggaagctcctgtgccccag
ttttccagcgggctagccccatctgccccccgatacacggcccccaaacgcctcgtgtgt
gagcagtgtggatccgtcatcctcacggcggcggtgaatattcaggagggccgctatcgc
caccacgagtgctatgcctgtgcggactgtggcctcaacctgggcatgaggggccacttc
tggttcaacgagaagatgttctgtgagaagcacgcctgccagcgctaccaggaccaggcg
gcagagagcagctcctga
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