Leucoraja erinaceus (little skate): 129713397
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Entry
129713397 CDS
T09122
Name
(RefSeq) rab11 family-interacting protein 1-like
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
129713397
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
leri04131
]
129713397
Membrane trafficking [BR:
leri04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
129713397
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RBD-FIP
Motif
Other DBs
NCBI-GeneID:
129713397
NCBI-ProteinID:
XP_055518400
LinkDB
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Position
35:14233153..14263391
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AA seq
1339 aa
AA seq
DB search
MSLLGQSQRWFPTHVQVVVLRARGLRAKGRDGTNDAFVIMQLGKEKYSSSVAEKSREPLW
REEAEFELPPLLQQASPDKGTTLYLIVTHRALVGLDKFLGQAVIDLREFYHHKTKNKVGW
HKLQSKQGKKEKERGEIEVDIRFVRNNMTASMFDLSMKDKSRSTLGKLKDKLKGKKKDGF
SDSASAVIPSISTPVDSDDENMVAGQKKKKKSKLKMLFPKSNLQRTSLSQSMSVIPTGPS
SPADLNKEARTFADEDFTEIQLHNSPEEENPSKDLHVPKIMGHKRSSSEDTKQLTLAPST
AGKKETLSLFSGLRPKSDPVSQSNLCINGSHVYAEEPNPILHSKPKSDSKLQSNSQFYTS
LEDLPSKLSPSPLETQPHAGFSDQALKSATLPGPQRLGSTGDLTVVQRPDGPKEKDTGFS
RSSGKEEEGGKSADSSNAPGAGTKSLNPFEEGIKEEERIARPMPKAEVVKDEGVVKKEEP
KRGGLMSLFPRKTEAVKASNTKEPLNPFDTVEAKKPPSSSVWSSRTAAIKPKLDVSPKFE
TKANSLSSFLSDPSSPPSSAPSDPFSSAPAIGPRGSDLSSRHLTNSPPLPSKSDSLGLRP
SRVDESGLTPSLLPLVAGSSSSSMAIDTQTKQLPSPEIVGGRPLEVGVTPRQGSKVSPRL
LLQELTTRGQNARTDQRSPSDGEEDSAIVHPDGSSRGVPLETNPVDTTVNLEEDERVGSE
DERRVGSEDERVGSEDERVGSEDERVGSEDERVGSEDMSPVKMPGSDVSQGKMSMDHPAL
INPNAVRTSATSHPTTPVPKVPPRSSVPSSGAPPAPKPEQNVPPVPAPRSLPTMNKAATL
DAPSRSAEGQLLKDLMHFEWGANPVAESAAGVGTDGTLAAGTPVNNLSLCGPQGDDHSGL
LVATHKPEPCSISGLDLASPTEMTDDYPLMLVEEDVDMDMDSPSTLQPNGQMVLPEKMEQ
VAEDPSASELEVEGDVGHVSPPPEPPAPEPPAVTLVWQAEAQTSPDPNPDLTHVTPADSD
HPANLQPVAIEPNDGNANQWLVNGIKGNATVTTDKGGECLGQSLALTNKRESVELPMKED
RVHLELMANAATPATLEMADVTLDMGDETFNGHELQTSERAAVVSSISTPSVGSGRLEAS
PATVDSVGFLVPPLSPSALSRPASPLPDTPPPAGRSRGVEHSGQTMLIQARVVPTETQPV
HPPGNAAAVLYKRRLHPVKPMNAAETRSNEIASEENLKTKIKNTGLLVTKSSAGHSFAVN
ENQSHPKDYDRSDPASAYAQLTHDELIQLVLKQKELITKKDGHVRELENYIDNLLVRVME
ETPNILRVACPPNRRAERV
NT seq
4020 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgctgggacagagccagcgatggttccccacacatgtccaggttgtggtactc
cgtgcccgggggctgcgagccaagggccgggacggtaccaacgacgcctttgtcatcatg
cagctgggcaaggagaagtactcgagctcggtggccgagaagagccgtgagccgctgtgg
agagaggaggccgagttcgagctgccgcccctgttgcaacaggccagccccgacaagggc
actactctctacctcatcgtaacccaccgggcactggtgggcttggacaagttcctggga
caggcggtgatcgacctgagggaattctaccatcacaagaccaagaacaaagtgggatgg
cacaagcttcagtccaagcagggtaagaaggagaaggaacgaggggagattgaggtggac
atcaggtttgtgaggaacaacatgacggccagcatgtttgacctctccatgaaggacaag
tccaggtcgactctcggcaagctgaaggacaagttgaagggaaagaagaaggatgggttc
tctgactctgcctcagccgttatccccagcatcagtaccccagtggacagcgatgatgag
aacatggtggcggggcagaagaagaagaagaaatccaagctgaagatgctgttccccaaa
tccaacctgcagcggacatccctgtcgcagtccatgtctgtcatccccacgggcccatcc
tctccagctgacctcaacaaggaagctcgcaccttcgctgatgaggacttcactgagata
caactgcacaactcccctgaagaggagaacccgagcaaggatttgcatgtaccaaaaatc
atgggccacaaaagatcttctagtgaagacaccaagcagctgactctggccccatccacg
gcggggaagaaggagaccctgtcattgttcagtggcctgaggccaaagagtgaccctgtg
tcacagtccaatctctgcatcaacggcagccacgtgtacgcagaggaacccaatcccatt
ctccactctaaaccaaagagcgattcaaagttgcagtccaacagccagttctacacctct
ctggaggacctaccttccaagttgtccccctctcccttggagacccaaccgcacgcgggc
ttcagtgaccaagccttgaaatctgccaccctgcccggcccccagcggctcggcagcact
ggtgacctgactgtcgtccagaggccggatgggccaaaggagaaggacaccggattctcc
aggagctccgggaaggaagaggaggggggtaaaagcgcggactcctccaatgcccctgga
gcaggtacaaagtctctcaacccctttgaggaagggatcaaggaagaggagaggatcgct
cggccaatgcccaaggcggaggtggtaaaagacgaaggggtggtcaaaaaggaggagccc
aaacgtgggggcttaatgtccctgtttcccaggaagaccgaggccgtcaaagcttccaac
acaaaggagccactgaacccctttgacacagtggaggcaaagaaaccaccatcctcctcg
gtgtggtcaagcaggactgcagccatcaaacccaaattggacgtgtctccaaagttcgaa
accaaagccaactctctgtcatctttcctttctgatccctcgtctcctccctcctctgct
cccagcgacccctttagctcagctcctgccatcggcccgagaggctctgacctttccagc
cgacatttgaccaatagtccacccctgccctccaagtcagactccttgggacttcggcca
tctcgtgtagatgagtccggcctcaccccttcgcttctgccccttgttgccggctcatcc
tcctcttccatggccatagatacccagacgaaacagctgcccagccctgagatagttggg
ggaaggcctttggaggttggggtaacacccaggcaagggagcaaggtgtcgcctcgactc
ttgctccaggagctgaccacaaggggacagaacgcaagaactgaccagcgatccccatct
gacggagaggaggactctgccattgtgcatcctgatggttcatctcgaggtgttccactt
gaaactaatccagtggacacaactgtaaacctggaggaagatgagagagtgggcagtgaa
gatgagaggagagtgggcagtgaagatgagagagtgggcagtgaagatgagagagtgggc
agtgaagatgagagagtgggcagtgaagatgagagggtgggcagtgaagatatgagccct
gtgaagatgcccggcagtgatgtttcacaaggaaagatgtccatggatcatccagcctta
atcaaccctaatgctgtccgaacatcagccaccagccatcccaccacgcctgtgcccaaa
gtgccaccccgtagcagtgtgcccagttcaggggcacctcctgctccgaaaccggagcaa
aatgtcccaccagttcctgccccaaggagtttgcccacgatgaacaaagcagccaccctt
gatgccccatcgagatctgcagaggggcaacttctgaaggacttgatgcattttgagtgg
ggtgccaatccagtcgcagagtctgctgcaggtgtggggacagacggtactttggcagcg
gggacacctgtcaacaatctgtccctgtgtggaccacagggagatgaccacagtggcctg
ctggtggccacacacaagcctgagccttgctccatctctggcctggaccttgcttctcca
acggagatgactgatgattacccactcatgttggtggaggaggatgtggacatggacatg
gacagcccttccactctacagcccaacgggcagatggtacttcctgagaagatggaacaa
gttgcagaagatccttcggcaagtgagctagaagtggagggtgatgttggtcatgtgtca
ccacctccagaacctccagctccagaacctcccgctgtgaccctggtctggcaggcagaa
gcccagacctctcctgaccccaacccagatctgacccacgtcaccccagctgattctgac
catccggccaacttgcagcctgtggcgatcgaacccaatgatggcaatgccaaccaatgg
ttggtcaatggaatcaaaggcaacgctacagtgaccactgacaaaggtggagaatgtctc
ggacagagcctagccctcaccaataaacgcgagagtgtagaactacccatgaaagaggac
cgtgttcatctagaactaatggctaatgcagccacccctgctactctggaaatggccgat
gttactttggacatgggagacgagaccttcaatggacatgagctacaaacttctgagagg
gcagctgtggtttcttccatttccaccccatcggttgggtctggtcggctcgaggcttca
cctgctactgtagattctgtcgggttcttggttcctcctctgtctccttctgcgctgtca
cggcctgcctcccccctgcccgataccccccctccagcagggagatcccgcggagttgag
cactctggccagacgatgctgattcaggcaagggttgtgcctaccgagacacaaccagtc
catcccccgggcaatgcagcagcagtactttacaaacgcagacttcatcctgtgaaaccc
atgaatgctgcagaaacaagatctaatgaaatagcttcagaggagaatctgaagacaaag
atcaagaatacgggtttattggtgaccaagtcttctgctggtcactcttttgcagtcaat
gaaaatcaaagtcatcccaaggactacgatcgctctgacccggcctctgcctacgcccag
ctcacacacgatgagctgatccaactggtcctgaagcagaaggagctgatcaccaagaag
gatggccacgtgcgtgaactggaaaactacatcgacaacctgttggtccgcgtgatggag
gagacccccaacatcctccgggtggcctgcccgcccaacaggagggcggagagagtgtga
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