Leucoraja erinaceus (little skate): 129713459
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Entry
129713459 CDS
T09122
Name
(RefSeq) LOW QUALITY PROTEIN: protein ERGIC-53-like
KO
K10080
lectin, mannose-binding 1
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
129713459
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
leri04131
]
129713459
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
leri04091
]
129713459
Membrane trafficking [BR:
leri04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
129713459
Lectins [BR:
leri04091
]
L-type lectins
129713459
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lectin_leg-like
Lectin_L-type_dom
Motif
Other DBs
NCBI-GeneID:
129713459
NCBI-ProteinID:
XP_055518480
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All DBs
Position
36:4244867..4309063
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AA seq
491 aa
AA seq
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MLAFVVSAVPLICLLAAPTSGQRAEGPSRRFEYKHSFKGPHLVLKDGSIPFWTHHGNALP
RSDQVRIVPSIRSQSGSVWTKNRVAFVNWEIEVAFRITGRNRIGADGLAVWYSKERGXAG
PVYGAADQWNGVGVFFDTFDNDGGKNNPIVLVAGNDGQMAYDHMTDGASQAQGWCLRDYR
NSYQAVRVRIRYYQKTLQVYINLGRADVDENYELCTEVMDMNLPIDGHFGVSSATGAVAD
DHDVLSFITFSLTDPGTLATSIQGQEAQGEDEYQKEYERFEKDLEKRKNEFQKQHPELST
PDEDAFETESQRELQMVLSGQSIVREELRKLREKLADAFDEHKRHSENFSKLSREQHTST
TMREVEHQDVDSERLAIVLNGQKKAAEQMQDIGMNIDNIATKMKLNQQSLKTMVLAMDHF
GEIKEHVHIVKKDVDSLLNAKVQLLSCPKALPVPSCLSMWHFLVFIVLQSVFFFYYLIHR
NRRETNSKKYY
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgttggcttttgttgtgtctgcagtgcccttaatctgcttgctcgccgctcccacctcc
ggccagagagctgaggggccgagtcgcaggttcgaatacaaacacagcttcaaaggaccg
cacttagtcttgaaggacggctccattccattctggacccaccacggcaatgccctccca
agatctgaccaagtccggattgtaccttcgataagaagtcaaagcggttcggtttggacc
aagaaccgtgtcgcctttgtcaactgggaaattgaagttgctttccggatcacaggcaga
aaccggattggtgctgacgggctggccgtgtggtacagcaaggagaggggcntggcggga
ccggtgtacggagcagccgaccagtggaacggcgttggcgtcttcttcgatacgttcgac
aacgacggcggtaaaaacaacccgattgtgcttgtggcgggaaatgacggccagatggcc
tatgatcacatgacagacggtgctagccaggctcaggggtggtgtctgcgcgattatcgc
aacagctatcaggccgtgcgcgtgaggatacggtactaccagaagacactgcaggtttac
ataaatctgggcagggctgatgtcgatgagaactacgagttgtgtactgaagtcatggac
atgaacctaccaatcgacgggcactttggagtgtcgtcagccacaggcgcagttgctgat
gaccacgatgtcctgtcattcatcaccttcagcttgactgacccgggaacgctggccacc
tcgatccaaggccaggaggcgcaaggggaggatgagtaccagaaggaatatgaacgtttt
gagaaagacttggagaagcggaagaacgaatttcagaagcaacaccctgagctgtccact
ccagatgaagatgcgtttgagactgagagccagcgggagttgcagatggtactcagcggg
caatccatcgttcgggaagagctgaggaagctccgagaaaagttggcggacgcgtttgac
gagcacaaacgccattcggagaacttcagcaagttgagcagggagcaacataccagcacc
acgatgagagaagtggaacatcaggatgttgactctgaaagattggcgatcgtgcttaat
gggcagaagaaagcggctgaacaaatgcaagacattgggatgaacatagacaacattgca
acaaaaatgaagctgaaccaacagtccttgaagaccatggttttagcgatggaccacttt
ggggagattaaggagcatgtccacattgtcaagaaggacgtcgacagtcttctgaatgcc
aaggttcaacttctcagctgcccaaaggcacttcctgtcccatcgtgtctgtccatgtgg
cacttcctggtgttcattgtcctccaatcagtattctttttctactacctaatacacagg
aatcgaagggaaaccaattcaaagaaatattattga
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