Leucoraja erinacea (little skate): 129713537
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Entry
129713537 CDS
T09122
Name
(RefSeq) AP-3 complex subunit beta-2 isoform X1
KO
K12397
AP-3 complex subunit beta
Organism
leri
Leucoraja erinacea (little skate)
Pathway
leri04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
129713537
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
leri04131
]
129713537
Membrane trafficking [BR:
leri04131
]
Endosome - Lysosome transport
Others
AP-3 complex
129713537
Endosome - Golgi transport
129713537
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
AP3B1_C
Cnd1
HEAT_2
MOR2-PAG1_C
BUD22
Motif
Other DBs
NCBI-GeneID:
129713537
NCBI-ProteinID:
XP_055518612
LinkDB
All DBs
Position
36:complement(9576126..9662508)
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AA seq
1161 aa
AA seq
DB search
MKPMQRLLQLPVAAVGLLKPLGREDRSPVLGPEASPQTWYNAVQPDELRLLRTSPEPERR
GEETADEWPTTPARHDDLKEMLDSNKDSLKLEAMKRIVAMIARGKNASELFPSVVKNVAC
KNIEVKKLVYVYLVRYAEEQQDLALLSISTFQRGLKDPNQLIRAGALRVLSSIRVTIIVP
IMMLAIKEAASDMSPYVRKTAAHAIPKLYSLDLDQKDQLIEVIEKLLADKTTLVAGSVVM
AFEEVCPERIDLIHKNYRKLCNLLIDVEEWGQVVIIDMLTRDPRTQVLNPNHNEILLEEN
PEKGFYGTDEEDSKQEEADAVVLPKRKPYVMDPDHRLLLRNTKPLLQSRNAAVVMAVAQL
YFHLAPKAEVGVIAKALVRLLRSHSEVQFVVLQNVASMSIKRRGMFEPHLKSFYIRSTDP
TQIKVLKLEVLTNLASETNISTILREFQTYIKSQDKDFVAATIQAIGRCATNIDEVRDTC
LSGLVQLLSNRDELVVAESVVVIKKLLQMQPAQHSDIIRHMAKLIDNIMVPMARASILWL
IGEYCEHVPKIAPDVLRKMAKSFTSEEDIVKLQIINLAAKLYLTNSRQTKLLTQYVLNLA
KYDQNYDIRDRARFIRQLIVPTEKSGVLNKYAKKLFLAQKPPPVLESSFKDRDHFQLGSL
SHLLNSKASGYQELPDWPEAAPDPSVRNVENDVSSETDVRIGLLGDWKEVPEWTKPSSRE
KRKEKVEKPFYSESEGESEPTESADSESPTTSESEESAGGMESESASESEEEESEEEEGK
SDRQKKKKKGQKEKSKHGDESEDSGQSEGGDKEKKRNEEESSSSSPSSSEESSSENSSSE
SEPEENSDSDPGKKHKRKSVAKLPSGSLKAKKKEISLLDLDDFSGPSVPTTTPSPNTFSK
SLNLDLQGLTLSNSNLPSEMSSPSLGRVKTYELLHRLTGEGLAVRYHFNRRPFSPDQAMV
SVQMQFTNNSDMDIRHLHVNEPKLHSGMRMQGFKEIDVLQPGDVASEAMGIDFCDSTQAA
NFQLCSQTRQFYMSIQPPVGELMMPIFMTENSFKKEQEQLLNTSTGKLMGMNEINEKLTL
TEQCRSDQAVVQRVLSTANLGRVPCGQSDEYRFAARTVSGGALVLITLVTKDNGAAQLTV
NCEKMVIGTMMAKEIVETLTQ
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgatgcagcgattgctgcagctgccggtggctgcggtggggctgctgaagccg
ctgggccgggaggatcgcagcccggtgctgggtcctgaggccagcccgcagacctggtac
aacgccgtccagcccgacgagctgcggctcctgcggacatcgcccgagccagaacggcgg
ggagaggagacggcagacgagtggcccaccacacccgcacggcacgatgatctgaaggag
atgctggatagcaacaaggactcgctgaagctggaggccatgaagaggattgtggcgatg
atcgccagagggaagaatgcgtcggagctcttcccctcagtggtgaagaacgtggcctgc
aaaaacattgaggtgaagaagctggtttacgtttacctggttcgatacgcagaagaacag
caggacctcgcccttctctccatcagcaccttccagagaggattaaaggacccgaaccag
ctgatccgagcgggagccctgcgtgttctctccagcatccgagtcaccatcatcgtcccc
atcatgatgctggccatcaaggaagctgcttcagatatgtccccctatgtcaggaagaca
gctgcccacgccatccccaaactgtacagtctggatctggatcagaaggaccagctgatt
gaggtgattgagaagctgctggcggacaagacaacgctggtggcaggcagcgtggtgatg
gctttcgaggaggtgtgtcccgagcgcatcgacctgatccacaagaactaccggaagctg
tgcaacctgctcatcgacgtggaggagtggggccaagtagtcatcatcgacatgctcacc
cgagacccacgcacgcaggtcctcaaccccaaccacaacgagatcttgctggaagaaaac
ccggagaaaggattttacggcacggatgaggaagactccaagcaggaggaagcagatgca
gtcgtgcttcccaaacggaagccctacgtgatggaccccgaccaccggctgctccttcgg
aacaccaagcccctcctccagagccggaacgccgcggtggtgatggccgtggcccagctc
tacttccacttggctcccaaggcggaggtgggcgtcatcgccaaggccctggtccgcctg
ctccgcagccacagcgaggtgcagtttgtggtcctgcagaacgtcgcctccatgtccatc
aaacgccggggaatgtttgagcctcacctgaagagtttttacatcaggtccacggacccc
acacagattaaggtgctgaagctggaagtcttgaccaacctagccagcgagactaacatc
tccaccattctccgggagttccagacctacatcaagagtcaggacaaggactttgtggcc
gcaaccattcaggccattggccgctgtgccaccaacatcgacgaggtccgtgacacttgt
ctgagcgggctggtccaactgctctccaacagagacgagctggtggtggccgagtcggtc
gtggtcattaagaaactgctgcagatgcagccggcccagcacagcgacatcatcaggcac
atggccaaactcatcgacaacatcatggttccaatggcgagggccagcatcctctggctg
atcggagagtactgcgagcacgtgcccaagattgctcctgatgtcctgcggaaaatggcc
aagtccttcaccagcgaggaggacatcgtgaagttgcagatcatcaacctggcggccaag
ctctacctcaccaactccagacagaccaagctgctgacccagtacgtcctgaacctggcc
aagtacgaccagaactacgacatccgcgaccgcgcccgcttcatccgccagctcatcgtc
cccacggagaagagtggcgtgctgaacaagtacgccaagaagttgttcctcgcccagaaa
ccgccccccgtgctcgagtcttccttcaaagatcgagaccacttccagctgggctcactg
tcccacctgctcaacagcaaggccagtggataccaggagctcccggactggcctgaagca
gcccctgatccatccgtccgcaacgttgagaacgacgtgtcctcggagacggacgtgcga
atcggattgctgggagactggaaagaggtcccagaatggaccaagcccagcagcagagag
aagaggaaggagaaagtggagaaaccattctactccgagtcggagggagagtccgagccc
actgagtcagcggacagtgagtcccccaccaccagcgagtcggaggagagcgcgggcgga
atggaaagcgagagtgcctcggagagcgaggaggaagagagcgaagaggaggagggcaag
tcagaccggcagaaaaagaagaagaaagggcagaaggagaagagcaagcacggagatgag
agcgaggacagcgggcagagtgaaggcggagacaaggagaagaagcggaacgaggaggag
tcgagctcttcgtcaccttcctcctccgaggagagttcatcggaaaacagctcctccgag
tcggagccggaggagaactcggactcggaccctgggaaaaagcacaagaggaagtctgtg
gccaagttaccctctggatcgctcaaagctaaaaagaaggaaatctccctccttgacctc
gatgatttcagcggcccgtcagtccctacaaccactccatcacccaacacattctccaag
agtctcaacctggatctgcagggactaacgttgtccaactccaacctgccttctgagatg
tcgagtccgtcgctgggccgcgtgaagacctacgagctgctgcatcgcctgacgggcgag
gggctggcggtgcgctaccacttcaaccggcgccccttcagccccgaccaagccatggtc
tccgtgcagatgcagttcaccaacaactccgacatggacatccgccacctccacgtcaac
gagcccaagctgcactccgggatgaggatgcagggattcaaggagatcgacgtcctgcag
cccggtgacgttgcctcggaggccatgggcattgacttctgcgattccacacaggcagcc
aacttccagctgtgctcacagacccggcagttctacatgtccatccagccgccggtgggg
gagctgatgatgcccatcttcatgaccgagaactccttcaagaaggagcaagaacagctg
ttaaacaccagcaccgggaaactgatggggatgaatgaaatcaatgagaagctgaccctc
acggagcaatgccggagtgaccaggccgttgtccagcgggtgctgtcgacagctaacctc
gggcgggtgccctgtggccagagcgacgagtacaggtttgccgctcggaccgtgagcggt
ggtgctctggtcctcatcaccctggtgaccaaggacaacggcgctgcccagctgaccgtc
aactgtgagaagatggtgatcggcacgatgatggccaaggagattgtggagacactgacc
cagtga
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