KEGG   Leucoraja erinaceus (little skate): 129713563
Entry
129713563         CDS       T09122                                 
Symbol
skic8
Name
(RefSeq) SKI8 subunit of superkiller complex protein
  KO
K12602  WD repeat-containing protein 61
Organism
leri  Leucoraja erinaceus (little skate)
Pathway
leri03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:leri00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    129713563 (skic8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:leri03019]
    129713563 (skic8)
Messenger RNA biogenesis [BR:leri03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ski complex
     129713563 (skic8)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40_Prp19 Beta-prop_THOC3 WD40 Beta-prop_WDR3_1st Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR3_2nd WD40_MABP1-WDR62_2nd WD40_CDC20-Fz Beta-prop_WDR36-Utp21_2nd EIF3I WDR55 Beta-prop_CAF1B_HIR1 WD40_Gbeta Beta-prop_TEP1_2nd ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st Beta-prop_WDR36-Utp21_1st Beta-prop_WDR75_1st Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st Beta-prop_TEP1_C Beta-prop_EML Beta-prop_RIG_2nd WDR90_beta-prop_4th Beta-prop_VPS8 Beta-prop_ACSF4 Beta-prop_Aladin Beta-prop_SCAP eIF2A Beta-prop_WDR41 Beta-prop_Vps41 Beta-prop_WDR35_TULP_N WD40_RFWD3 Beta-prop_DCAF4 NBCH_WD40 Beta-prop_EIPR1 Ge1_WD40 Beta-prop_SPT8 Beta-prop_NWD2_C Beta-prop_Nup120_160 Tricorn_2nd Cytochrom_D1 Beta-prop_IFT140_1st Beta-prop_HPS5 Beta-prop_WDR75_2nd PROPPIN Beta-prop_NUP159_NUP214 WD_LRWD1 WDR54 Beta-prop_DCAF12 B-prop_COPA_B_2nd WD40_like Nucleoporin_N DUF2415
Other DBs
NCBI-GeneID: 129713563
NCBI-ProteinID: XP_055518682
LinkDB
Position
36:11692007..11709187
AA seq 305 aa
MSTQYSILFKQEHAHEDSIWSVAWGKSEKDGSETIVTGSLDDLVKVWKWQDEKLELQWTL
EGHQLGVVSVDINHTGTTAASSSLDAHIRLWDLELGKQIKSLDVGPVDAWSVAFSPDGKF
LATGSHLGKINIFGVESGKKESSLDTRGKFILSIAYSPDGKYLASGAIDGIINMFDIATG
KLLHTLEGHAKPIRSLTFSPDSQLLITASDDGYIKIYDVQHGNLAGTLSGHGSWVLSVAF
CPDDTHFVSSSSDKSVKVWDAGSRSCVHTFFDHLDQVWGAKYNGNGSKIVSVADDREIHI
YDCPI
NT seq 918 nt   +upstreamnt  +downstreamnt
atgagcacgcagtacagcatcttattcaagcaagaacacgctcatgaagactctatctgg
tctgtggcttggggaaagagtgagaaagatggctcagagaccatagtgactggctcatta
gatgacttggttaaagtctggaaatggcaagacgagaagttggagctccagtggaccctg
gaggggcaccagctgggagtggtatcggttgacattaatcacaccgggaccactgcagcc
tccagctctctggatgcacacattcgcctctgggatttggagttggggaaacagatcaag
tctttggatgttgggccagttgatgcttggtccgtggccttctctcccgatggcaagttt
ttagcgactgggagtcacttgggaaaaataaatatatttggagttgaaagtggaaagaag
gaatcttctttggatacaagagggaagttcatcctcagcattgcatacagtcctgacggg
aagtacctagccagtggtgccattgatgggatcatcaatatgttcgacattgcaaccggc
aagttgttgcacacgctggaaggccacgccaagccaatcagatctctgacattctcccct
gactctcagcttctaattactgcttctgatgatggttacataaagatttatgacgtacaa
catggcaatcttgcaggtacgctgagtggtcacggatcctgggtgttgagtgtcgctttc
tgcccagacgacacacactttgtatcaagctcttctgacaaaagtgttaaggtgtgggac
gctggctccagaagttgtgtacacacattttttgatcacctagatcaggtctggggtgct
aagtacaatggaaatgggtcaaagatagtatctgtcgcagacgatcgtgagatccatatt
tatgactgtccaatctga

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