Leucoraja erinaceus (little skate): 129713581
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Entry
129713581 CDS
T09122
Name
(RefSeq) nuclear receptor ROR-alpha A-like isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
leri03000
]
129713581
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
leri03310
]
129713581
Transcription factors [BR:
leri03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
129713581
Nuclear receptors [BR:
leri03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
129713581
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
HisG
Motif
Other DBs
NCBI-GeneID:
129713581
NCBI-ProteinID:
XP_055518717
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Position
36:complement(13406162..13512528)
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AA seq
469 aa
AA seq
DB search
MHVLCSAMKAQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKNCL
IDRTSRNRCQHCRLQKCLMVGMSRDAVKFGRMSKKQRDSLYAEVQKHRLQQQQQQQRDQP
QPQPPGEAEPLTPPYSSLAELNSDLSNLYVDGQAAEVGKAEPAMNNLYLDIQPSPDQSGL
DINGIKQEPICEYATGPDFFPYCSFTDGETSPTASMAELEHLAQNIAKSHIETCQYLQEE
LQQLMWQTYVREELEIYLNKPREVMWQLCAIKITEAIQYVVEFAKRIDGFMELCQNDQIV
LLKAGSLEVVFVRMCRAFDSQNNTVYFDGKFAGPDVFKSLGCDDLINSVFETGKSLCALH
LVEDEIALFSAYVLISADRLWLQEKLKVEKLQQRIQLALQHLLQKHHREDGVLTKLLSKV
TTLRALCNRHTEKLSSFKAAHPDIVRVHFPPLYKELFGSEFEQMMPAEG
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtgctgtgctcggcgatgaaagctcaaattgaaatcatcccatgcaagatctgt
ggagataaatcatcaggaatccattacggagtcatcacctgcgaaggctgcaaggggttc
ttccggagaagccagcagagcaatgccacctactcgtgcccgcggcagaagaactgtctg
attgaccgaacgagccgcaatcggtgccagcactgtcgcttacagaagtgtctgatggtg
gggatgtctcgcgatgctgtcaagtttggccgcatgagcaagaagcagagggacagcctg
tacgcagaggtgcagaagcatcggctgcagcaacagcagcagcagcagagggaccagccg
cagccgcagcctcccggcgaggcagagcccctcaccccaccctatagcagcctggcagaa
ctcaacagcgacctcagcaacctgtacgtggacgggcaggcagccgaggtgggcaaggca
gagccggccatgaacaacctctacctggacattcagccctctcctgaccagtccggtcta
gacatcaacggcattaagcaggaacccatttgtgaatatgcaacaggaccagacttcttc
ccctactgttcctttacagatggggaaacctctccgactgcctcgatggctgagctagag
caccttgcacagaacattgccaagtcccacattgagacctgccaatacctccaggaggag
ctccagcaactgatgtggcaaacatacgtgcgggaggagctggagatttatctgaacaag
cccagggaggtgatgtggcagttgtgtgctatcaagatcacagaggcgattcaatatgtg
gtggagtttgccaaacgcattgatggattcatggaactgtgtcaaaacgatcagatcgta
cttctgaaagcaggttctttagaagttgtgttcgtccgaatgtgtcgagctttcgactcc
cagaacaacaccgtgtattttgacgggaagtttgccggtccagatgtcttcaaatcactg
ggttgtgatgacttgatcaactccgtctttgaaactggcaaaagtctgtgtgcgctgcac
ttggtggaggatgagattgccttgttttctgcttacgtgttgatctcggctgaccgcctg
tggctgcaggagaagctcaaagtggagaagctgcagcagaggatccagctggcacttcaa
cacctactgcagaagcaccaccgagaggatggcgttctcaccaagctcctatctaaagtg
actacattacgagcactgtgcaatcgacacacggagaagctctcctcgtttaaagcagca
caccccgacatcgtgcgtgtgcacttcccaccgctgtacaaggagctgttcggctccgag
tttgagcagatgatgccagcagaaggttaa
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