Leucoraja erinaceus (little skate): 129713628
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Entry
129713628 CDS
T09122
Name
(RefSeq) LOW QUALITY PROTEIN: transient receptor potential cation channel subfamily M member 1-like
KO
K04976
transient receptor potential cation channel subfamily M member 1
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
leri04040
]
129713628
Ion channels [BR:
leri04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
129713628
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
LSDAT_euk
TRPM2
TRPM_tetra
LSDAT_prok
Ion_trans
Glutaredoxin2_C
Motif
Other DBs
NCBI-GeneID:
129713628
NCBI-ProteinID:
XP_055518792
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All DBs
Position
36:101932..139691
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AA seq
1529 aa
AA seq
DB search
MCCMLCISIMFTLQYIRVSYDTRPDLLLHLMTTEWELELPKLLISIHGGLQNFELQPKLK
QVFGKGLIKAAMTTSAWIFTAGVSTGVIRHVGDALKDHSSKSRGRICVIGFAPWGIIENR
MDLIGKDVTRPYQTMSSPLSKLTVLSSTHSHFILADNGTLGKYGAEIRLRRQLEKHVSLQ
KINACLGQRVPVVCLVVEGGPNVISMVLESLRAEPPVPVVVCDGSGRASDILAFAHKYSA
DGGIISESVRDQLMVTVQKTFNYSRQQAQQLFLVVMECMKKKELITVFRMGSEGQQDIDL
AILTALLKGTNASAPDQLSLAMAWNRVDIARNHIFVFGNYGPPGTSTSEPITRQSTKLVR
QRVNKGKGKKKSKEEVKVETDPRKLELLNWVHSLEQAMIDALVLDRVDFVKLLIENGVNI
HNFLTIPRLEELYNTRLGPPNTLHYLVRDVKKGNLPPDYHISLIDIGLVIEYLMGGAYRC
AYTRKSFRTLYNNLFGPKRPKALKLLGMEDDDLPSKSKWKKKKKKKKEEEVDIDEDNPAL
GRFAFPYHELLVWAVLMKRQRLALFFWQQGEEALAKALVACKLYKAMSNECSASELVDDI
SQDLENNSRDFGQLAVDLLDHSYKHDEQVAMKLLTYELKNWSDSTCLKLAVTAKHRDFIA
HTCSQMLLTDMWMGRLHVRKNPGLKIMLGIIFPPTILLLDFKSSDELSYEATGDNEPGKE
KEEENEANAEAVSRKGDEEDGVENHHSIPIGRKIYEFYNAPIVKFWFHTMAYLAYLFLYN
YVILVKMESLPSISEWILISYILMLAIEKIREILMSEPSKLRQKVKVWMQEYWNVTDMVA
ISIFSCGLLLRLQQEPYMSYGRVIYCVDIIIWYIRVLDIFGVNKYLGPYVMMIGKMMVDM
LYFVVIMLVVLMSFGVSRQAILHPNEEPSWRLARNIFYMPYWMIYGEVFADQIDLYAMEI
NPPCGENLFDDDGKRLPPCIPGAWMIPAIMACYLLVANILLVNLLIAVFNNTFLEVISIS
NQVWKFQRYQLILTFHERPVFPPPIIVFSYLSMILRSCYRRKTQKVEERDRGLKLILSEE
ELKKLHEFEEQRVEQYFTQKEGQEQSSNHERIRITAERVENMAMRLEEVNEREHFMKASL
QTVDLRLAQLEEYSGRMVNAMEKLAGIDESDLAQSYSRCPSECEASYLIRQNSTEAASMY
RFHMDGDEGNEDNVGLMSPSMGSHRKALRHDPQLVDQGRNVTPRRRFGLRQSSSSRRPTE
EYRLLGVSQDPRCFSSCVDIFVSSTEAWHTPPKTQEGAGSPKFLPSLQADFGGAVTESVS
VARAKLETRLSFPLERSRATSYFLPLVPGSSHTPMGKARSAVFGPEGLVTGKEESSDYDC
IVDYVPSVNDPPWPPYGSMLCKNMPEELVMVEASRQTLMSSPEVMCEQQHQLTGVEDHAD
GGTSDISNLRAQVPRTFQKSENFLTVAPDRFTSPRSKSLHGHHRKAMLVVGESFDRPKQA
FSTKDLRQGWEESSGQAADLEENATETPC
NT seq
4590 nt
NT seq
+upstream
nt +downstream
nt
atgtgttgtatgctttgcataagcattatgtttacattgcagtatatccgtgtatcatac
gacacaaggcccgatctcctgctccacctcatgaccacagagtgggagctggagctgccc
aagctgctcatctccatccacggtggccttcagaattttgagctgcagcccaagctgaaa
caggtgtttggaaagggcctgatcaaagccgcaatgaccacgagtgcctggatattcact
gcaggagtcagcacaggtgtcatccgtcacgtgggagatgccttgaaagaccattcatcc
aaatctcggggaaggatctgtgtgattggatttgctccttggggaatcatcgaaaacagg
atggatttaattgggaaagacgtcaccagaccttaccaaacgatgtcgagccccctgagc
aagctgacggtgttgagcagcacgcactcgcacttcatcctcgctgacaacggcacgctg
ggcaagtacggcgccgagatccggcttcgccgccagctggagaaacacgtctccctgcag
aagatcaacgcatgtctgggtcaaagagtgccggtggtttgcttggtggtggaaggtggt
cccaatgtgatctcaatggtgctggagagcctgcgtgcagagccgcccgtccccgtggtg
gtctgtgatggcagtggccgagcctccgacatcctggcatttgcacacaagtactcagca
gatggagggataatcagcgagtctgtgcgggatcaacttatggtgacggtgcagaaaacc
ttcaactacagccggcagcaggctcagcagctcttcctcgttgtcatggagtgcatgaag
aagaaagagttgataaccgtgttccgaatgggctcggaggggcagcaggatatcgatctt
gcaatcctgacggcgttgctgaaaggtacaaatgcatcggctcctgaccagctcagtctg
gccatggcgtggaacagggtggacattgcccgcaatcacatctttgtctttggcaactac
gggccgccggggaccagcacttccgaacccatcactcgacaatcaacaaagttggtgaga
cagcgggtgaacaaaggcaaagggaaaaagaaaagtaaagaggaggtgaaggtggagact
gatccacgcaaactggagctgctgaactgggtacactcactggaacaagccatgatagac
gcgctggtgttagaccgtgttgactttgtgaagctgctgatcgaaaatggagtaaatatc
cacaacttcctgaccatcccacggctggaagagttgtacaacactagactcggacccccg
aacactctgcactacctggtgagggacgtgaagaaggggaacctgccccctgattaccac
atcagtttgattgacatcggcttggtcattgagtacctgatgggaggagcctatcgctgt
gcttacactcgcaaatccttccgaactctctacaataatttattcggaccaaagcggcca
aaagctctgaaacttctgggaatggaggatgatgacctgccctccaaatccaagtggaag
aagaagaagaagaagaagaaggaggaggaggtagacattgatgaggacaaccctgccctt
ggccgcttcgccttcccctaccacgagctgctggtgtgggcggtgctgatgaaacgccag
cgtctggccctcttcttctggcagcagggagaggaggccctggccaaagccctggtggcc
tgcaaactctacaaggccatgtccaacgagtgttctgccagcgagctcgtggacgacatc
tctcaggatctcgaaaacaattccagggactttgggcagcttgctgttgatctgctggat
cattcatacaagcatgatgagcaggtggccatgaaactgctgacatatgagctgaagaac
tggagcgactcgacctgcctgaagctggcagtgacagccaagcaccgggacttcatcgcc
cacacctgcagccagatgttgttgactgacatgtggatgggacgacttcatgtccgcaag
aacccgggcctcaagattatgctaggaataatattcccacccaccattctcctcctggat
tttaaaagcagcgacgagttgtcgtacgaagcaacgggagacaacgagcctgggaaggag
aaggaggaggaaaacgaggcaaacgcggaagcggtttccagaaaaggggatgaagaagat
ggagtggaaaatcaccacagtatcccgattggaaggaagatttacgagttttacaacgca
cccattgttaaattctggttccacacgatggcctacctcgcctacctgttcctctacaac
tacgtcattctggtgaagatggagagtttgccctcgatttcagagtggattctcatctcc
tacatcttaatgctcgccattgagaaaatccgagagatcctcatgtcggagccaagcaag
ctgcgacagaaggtgaaggtgtggatgcaggagtactggaacgtcactgacatggtggcc
atcagcatcttcagctgtggcctgttgctgcggctccagcaggaaccctacatgagctac
ggacgggtcatctactgcgtggacatcatcatctggtatatccgtgtgctggacatcttc
ggggtcaacaagtacctgggaccatacgtgatgatgatcggcaagatgatggtggacatg
ctgtactttgtagtcattatgctggtggtgctgatgagctttggagtatcaagacaggcc
attctgcatcccaacgaggagccctcctggagattagcccgcaacatcttctacatgccc
tattggatgatctacggagaggtgtttgccgatcagattgacctctatgccatggagatt
aaccctccgtgcggggagaacctgtttgatgatgatgggaagaggctacctccctgcatc
ccaggggcctggatgattcctgccatcatggcctgctacctccttgtcgccaacatcctg
ctcgtcaacctgctcatcgctgtctttaacaacactttcctggaggtgatttccatctct
aaccaggtgtggaagttccagcgttaccagctgatccttaccttccatgagaggcccgtg
ttccctccaccgatcattgtcttcagttatctgtccatgattctccgcagctgctaccgc
aggaagacccagaaggtggaggaacgagatcgcgggctaaaactgatcctcagtgaagag
gaattgaagaaactgcatgagtttgaggagcagcgtgtggagcaatacttcacacagaag
gaggggcaggaacagtcatcaaaccatgagcggatccggatcactgctgagagggtggag
aacatggcgatgcgtttagaggaggtgaatgagagggaacacttcatgaaggcctctctc
cagacggtggaccttcgtctggcccagttggaggagtacagcggccgcatggtcaatgcg
atggagaagttggcgggcattgacgaatcggatctggcccaaagctactcacggtgcccc
tcagaatgtgaggcctcctacctcatcaggcagaacagcacggaggcagcaagcatgtat
cgcttccacatggatggggatgagggcaatgaggacaatgtgggcctcatgtctccttcc
atggggtctcacaggaaggcgctgagacacgaccctcagctggtggaccaggggaggaac
gtgacccctagacgccggtttggtcttcgccaatcgtccagctcccgccggccgacggaa
gaataccgactgctgggggtcagccaggaccctcgatgcttcagctcctgtgtggacatt
tttgtgtcctctaccgaggcttggcacactccaccgaaaacccaagagggagcgggttct
ccaaagttcctgccgtctcttcaggccgactttggaggagctgtaactgagtctgtgtcg
gtagcacgagcaaagctggagacccgtctctcatttcccctggagaggtccagggcgact
agctactttctcccacttgtgcctggctcatcccatacaccaatggggaaggccagaagt
gctgtattcggcccagaaggtctggtgacaggcaaagaagaaagttctgactatgactgt
attgtggattatgtcccttctgtaaacgaccctccatggcctccgtatggcagcatgctt
tgtaagaacatgcctgaagaactggtgatggttgaagcttctcgccaaacgttgatgtcg
tctccagaggtgatgtgtgaacaacagcatcagctgacaggggttgaggatcacgctgat
ggtggcacttccgatatctccaacctcagagcacaggtgccgagaacattccaaaagtct
gaaaactttctaacagttgcgccggatagatttacctccccaaggtcaaagagtcttcac
ggacaccacaggaaagccatgctggtggtgggagaaagctttgatagacccaagcaggcc
ttcagcaccaaggatctgcgtcagggctgggaggagtcgagtggtcaagcagcagatctg
gaggagaacgccacagagactccttgctaa
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integrated database retrieval system
