Leucoraja erinaceus (little skate): 129713630
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Entry
129713630 CDS
T09122
Symbol
fan1
Name
(RefSeq) LOW QUALITY PROTEIN: fanconi-associated nuclease 1
KO
K15363
fanconi-associated nuclease 1 [EC:3.1.21.-
3.1.4.1
]
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
129713630 (fan1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
leri03400
]
129713630 (fan1)
Enzymes [BR:
leri01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.1 phosphodiesterase I
129713630 (fan1)
DNA repair and recombination proteins [BR:
leri03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
129713630 (fan1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAN1_TPR
VRR_NUC
Fan1_SAP
FAN1_HTH
EPO_TPO
Motif
Other DBs
NCBI-GeneID:
129713630
NCBI-ProteinID:
XP_055518794
LinkDB
All DBs
Position
36:complement(168809..180025)
Genome browser
AA seq
706 aa
AA seq
DB search
MPPKLKRPRVAVTSPTRARPCHPVTRRRVPAPPNKLSRPHRGKRERPWGGRRRRERTPTS
GSGDADAPXPPYYLGNFPKRVVAAVLRSPPPSCLNEDDARWIGPFGRLSAAAQKLYVRLF
QRKLNWLKVKKLDYAEVCLDLMPVIDELALAGLVQTEAELHDVSNGLALLTASELKLLTR
HFHLRAQGQRLEMIGSLLSLAKQQSIFSVNRSPGSAILTRMKEMVGPCVRISIAARAVFS
RVLLLYSLTQPMDEEDAACAGQNQLSTLLMVNMGRLTFPHYTIHREAKIFQNREDLLRYE
AACHTLAELGAAMAAKDWEVALQIYQRAKETWSHLDNSSNLWLWRQLPVYLRCFTAGWVY
TIVRCRGVEVLQRLHMYTEAVVELRNLLDQSDFCPENRGHWWDRLSLNLQQHLRQPEQAV
ACVRTALADIRVRAGHRLALQQRAQRMHDSPSCRQWHHLLQDLPVIHVEDVPHVTIKGRP
CPGMGSARFLLEEEPGSAVICSVEVLCLAHYRQLDFDQGIHGEGATFLTLFGLLFWEIIF
LPGIPDVFRNPFQTCPLDLYTDCFYRNRTEPIESRLRLLQEASTDTLHALMADVWNTHKD
TATALVNWEIFRSIQQAQSLVSCLGGLFLSGVCRILAEDPRQGRGGLPDLVVWSSERLQY
KLVEVKGPSDQLSHKQRVWLHRLHKLGAAVEVCHVSVVGARSLQLS
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgaagctgaagcggccgcgggtcgcggtgacgtcacccacccgggcccggccc
tgtcaccccgtgacgcggcgccgggtcccggccccccccaacaagttgtcgcggccccac
cgcgggaagagggagcgcccctggggggggaggaggaggagggagcgcacccccacctcg
ggctcgggtgatgcagacgcccccnnccccccctactacctggggaacttccccaagcgg
gtcgtggccgcggtgctgcggagccccccgccgagctgtttgaacgaggatgacgcccgc
tggatcggcccgttcgggcggctctcggctgctgctcagaaactctacgtcaggcttttc
caacggaagctgaattggctgaaggtgaaaaaactggattatgctgaggtgtgcctggat
ctgatgccagtcatcgatgagctggccctggctggcctggttcagacagaggctgaacta
cacgatgtttccaacggcctggccctgctgacggcttctgaactcaaactgctgaccaga
cacttccatttgcgtgcccagggtcagaggttggagatgattgggtcattgctgagcttg
gccaagcagcagtcgatcttcagcgtgaatcgtagtcctgggtctgccattctgaccagg
atgaaggagatggttgggccctgtgtacgcatatccatagctgcccgcgccgtcttctca
cgagtgctgttgctctactccctgacgcagccgatggacgaggaggatgcggcctgcgcc
ggtcagaaccagttgtctacactactgatggtcaacatgggccggctcaccttcccacat
tacaccatccacagggaggccaagatcttccagaacagagaggacttgctcaggtatgaa
gcagcctgtcacacgctggctgagctgggagcagcaatggccgccaaggattgggaagtt
gctctgcagatttatcaaagggccaaggagacgtggagtcacctggacaacagcagtaac
ctctggttgtggcggcagctgccggtttacctgcgatgcttcaccgccggctgggtctac
accattgtccgctgcagaggggtggaggttctacagcggctgcacatgtacacggaggcg
gtggtggagttgaggaacctcctggaccagagcgacttctgcccagagaaccgtggccac
tggtgggaccggctgtcactcaacctgcagcaacatctgagacagccggagcaggcagtg
gcgtgcgtaaggacagcgctggctgatatacgggtgcgtgcgggacaccgactggcactg
cagcaacgggcacaacgcatgcacgactccccgagctgcaggcagtggcaccacctcctc
caggacctgcccgtcatacacgtggaagatgtgccacatgtgacgataaagggcagaccg
tgcccgggaatgggctctgcccggttcctgctggaggaggagcctggctccgcagtgatc
tgttcggtggaggtgctgtgtctggctcactaccgccagctggactttgatcaagggata
catggggaaggggccacgttcctaacactattcggacttctcttttgggagatcatcttc
ctgccgggaataccagatgttttccggaatccatttcagacctgtcctttggatctgtac
acagactgtttctaccggaaccggacagagcccattgaatcgaggctccggctcctgcaa
gaagcttccacagacactctccacgcactcatggctgacgtgtggaacactcacaaagac
acagcgactgctttggtgaactgggagatcttccgttccattcagcaggcccagagcctg
gtgagctgcctgggtggtctgttcctgagtggcgtgtgtaggatcctggcagaggaccca
aggcagggccgtggaggcctacccgacctagtggtgtggagcagtgagaggctgcagtac
aagttggtggaagtgaaaggcccgagtgaccagttgtcgcacaagcagagggtctggctg
catcggctgcataaactgggggctgccgtcgaggtttgccatgtgagtgtggtgggagca
cgcagcctgcagctcagttga
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