Leucoraja erinaceus (little skate): 129713638
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Entry
129713638 CDS
T09122
Name
(RefSeq) LOW QUALITY PROTEIN: neogenin-like
KO
K06766
neogenin
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri04350
TGF-beta signaling pathway
leri04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
129713638
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
129713638
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
leri04515
]
129713638
Cell adhesion molecules [BR:
leri04515
]
Immunoglobulin superfamily
DCC/UNC5 family
129713638
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neogenin_C
fn3
I-set
Ig_3
Ig_2
Pur_ac_phosph_N
ig
Ig_DSCAM-DSCAML_C
V-set
Interfer-bind
Tissue_fac
CRLF2-like_D2
C2-set_2
Ig_4
Sp38
TMEM154
EphA2_TM
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
129713638
NCBI-ProteinID:
XP_055518813
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All DBs
Position
36:390341..496761
Genome browser
AA seq
1439 aa
AA seq
DB search
MAERPLRLLLLALALAAVSAARSSETVGRRFTLFYFTVEPADTLAIRGASVILNCSVFAE
PKARIEWRKDGIHLISDERRQMLPEGSLLIHSVVHSKHHKPDEGFYQCVATIDNLGTIVS
RTARMTVAGLPRFSGQPDGVFVHEGDTALLGCEVNADLVPFVRWEHNRQLVAVEGRFLKL
PSGTLEISNTSSNDAGSYHCSVEAAGSSKTSEEVFLTVLPEMDADREATFLQKPASVSKV
AGQSLILPCVVSGYPTPTVQWLHHDEIIWERSQRVALVGSGSLQISDMVEDDAGVYECVA
ESGNQTIRAQAELSVQVPPRFLKQPMNIYAHESMDIVFECEVTGTPVPTVKWIKNGDMVI
PSDYFKIVNERNLQVLGLVKSDEGLYQCVAENGVGNRQASAQLIILEHDVPIPTVPPTPL
TSATADHLVTATAGLLPSAPRDVVALLVSTRFIKLTWRPPAEPNGEILAYTVYYAKDGAN
RERVENTSRPGDLEVTIRDLMPEVKYVFRVVAHNKHGAGESSAPFRVATQPEVQVPGAAQ
NLVAQANSATSITVIWQEPHSDNGPINNYKLYYMENGAGSEQDVDVGALWYTMNGLKKFT
EYSFRVVAYNKHGPGVSTEEVVATTYSGAPSAPPQNVTLEVRNSKSIVVHWQPPPPGTHN
GVITEYNIRYKKAGRRGETDSTGGNQLSQTIDGLERNTEYSFRVSAITVNGTGPSSDWVS
AETFESDLDESRVPDKPSSLHVRPLVNHIVVSWTPPEDQDIVVRGYAIGYGIGSPHAETI
RVDYKQRYYSIENLEPNSHYVITLKAYNKVGEGIPLYESTATRPLTDVYLFDLFNNPYTP
VPDPSPMMPPVGVQATVLTHDTIRVTWADSSLPKNQKITDSRFYTVRWKTNYPANTKYKT
ADTNTLSYIVSGLKPNTLYEFSVKVTKGRRSSTWSMTAHGTTFETVPTSPPKDLTVVSKE
GKPRTIIVNWQPPSEANGKITGYIIYYSTDINAEIHDWVIEPVVGDRLTHQIQDLTLDTT
YYFKIQARNSKGMGPLSEFVQFRTPKAPGSGKLGKHPPSMDLGTDTRHSIGGHNSPHGSP
TSTLDSNIMLIIIISVGVFTIIMVVIIAFICTRRTNYQQKKKRAACKAANGSHKYKGNSK
DVKPPDLWIHHERLELKPIDKSPDPNPVMTDTPPIPRNSQDISPADNVDKDHTRRNSYLG
RGQEDGVSSMSSRRGLRPKIMMPFDAQPPQPVISAHPIHSLDNPHHHHHCDGPSSPTRSY
LRHQMATRPLASSLDRANSTESVRNTPNSDMSPALSSQTHTVDSLETDVPSVTYLPGSQD
EDSNRSVPTAHVRPSHPLKSFAVIAIPPASTGYEAASSSTPLLAQAGANPQVHSVKTASI
GTLGRSRSPMAVTVPSAPDVAESAKMLEDSDTNYSPDELNEEMAHLTGLMKDLNVITTA
NT seq
4320 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcgcccactgcggctcctgttgctggcgctggcgctggcggctgtgagcgcg
gcccggagctcagaaactgtcggccgaagattcacgcttttctacttcacggtggagcca
gcagacacgctcgcgatacgaggagcatcagttatactgaactgttcagtcttcgctgaa
cccaaggccagaattgaatggagaaaagatggaattcatctaatttcagatgaacgcaga
cagatgcttccagaaggttcactgttgatacacagtgtggtacattcgaagcaccacaaa
cctgatgagggattttatcagtgtgtggccaccatcgacaacctgggcacaatcgtgagc
aggactgcccggatgacagtagcaggtcttcctcggttcagcggtcagccagatggggtc
tttgtgcacgaaggcgacactgccctgctgggatgcgaggtgaatgctgatctcgttcca
tttgtgcggtgggaacataaccggcagcttgtggcggtggaaggcaggttcctgaaactg
cccagtggtaccttggagatcagcaacacctccagcaatgacgctgggtcttaccactgc
tctgtggaagccgcaggttcttccaagacaagtgaagaggtgttcctcaccgttttgcca
gaaatggatgcggatcgggaggcgacatttctccagaaacctgcctccgttagtaaggtg
gcaggccagtcactgatattgccatgtgtggtgtctggctacccaacacccaccgttcag
tggctccaccatgacgagatcatctgggaaaggtcccagcgggtggcgttggttggcagt
ggcagtctgcagatcagtgacatggtggaggatgatgctggggtgtatgagtgtgtggca
gagtctgggaaccagaccatccgagcccaggctgagctcagcgtccaagtcccccctcgc
tttctgaaacaacctatgaacatttacgctcacgagtccatggacattgtgtttgagtgt
gaagtgacgggcacaccagtgcccaccgtgaaatggatcaagaacggcgacatggtgatc
ccgagcgactacttcaagattgttaatgagcgaaacctgcaggttcttggtcttgtgaag
tccgacgaaggtctgtaccagtgtgtggcagagaacggtgtggggaaccggcaggccagt
gcccagctcatcatcctggagcatgatgttcccatccctactgttccccccaccccactg
accagtgccactgctgaccatctagtgacggccactgctggactgctgccctctgcaccc
cgcgatgttgtggcgctgctggtctccacccgcttcatcaagctgacgtggcgacctcct
gctgaacccaacggcgagatcctcgcctacaccgtctattacgccaaggacggcgccaac
agggaacgtgtggaaaacacgagtcgaccgggtgatctggaagtgacgatcagagatctg
atgccggaagtgaagtacgtgttccgtgtagtggctcacaacaagcatggagcaggggag
agctcggcccccttcagggtggccacccagcccgaagtccaagtgccaggagctgcccag
aatctggtagcacaagcgaactctgccacctcgatcactgtcatatggcaggaacctcac
tctgacaacgggcccatcaacaactacaagctctactacatggagaacggggctggcagt
gagcaggatgtggatgtgggagctctgtggtacaccatgaatgggctgaagaagtttaca
gagtacagcttcagggtggtggcgtacaacaagcatggtcccggcgtctccacagaggag
gtggtggccaccacctattcaggagcccccagtgcaccccctcagaacgtcacgctggag
gtccgtaactccaagagcatcgtggtacactggcagcctccgcccccagggacacacaac
ggcgtgatcaccgagtacaacattcggtacaaaaaggccggtcgccggggggagacagac
tccacgggagggaaccagctctctcagactatcgatgggctggagcgtaacaccgagtac
agtttccgagtgtccgcgatcaccgttaacggcacggggccatcatcagactgggtgtct
gccgagacatttgaaagtgacctggacgagtcgcgggttccggacaagcccagctctctc
catgtgcgccctctggtcaaccacatcgtggtgagctggaccccgcctgaagaccaggac
atcgtggtgaggggttacgctatcggttacggcattggcagcccccatgcagagaccatc
cgcgttgactacaagcagcgttactactccattgagaacctggagcccaactctcactat
gtgatcacactgaaggcctacaacaaggtcggagagggcatccccctgtacgagagtacg
gccaccagaccactaaccgatgtttatttatttgatcttttcaataatccatacactcca
gtaccagaccccagccccatgatgcccccggtcggtgtacaggccactgtgttgacccac
gacactatccgtgttacctgggcagacagctcgctgcccaagaaccagaagattaccgac
tcccgcttctacaccgtgcgctggaaaaccaactaccccgccaacaccaagtacaagacg
gcagacaccaacacactgagctacattgtctcgggcctgaagcccaacactctctacgag
ttttctgtgaaggtgacgaagggtcggaggtcgagcacctggagcatgacggcacacggg
accacgtttgaaacggtgcccacatctccccccaaggatctgaccgtggtcagcaaggag
ggcaagcccagaaccatcatcgtcaactggcagccaccgtcagaggccaacggcaagata
acaggctacatcatctactatagcacggacatcaatgccgagatccatgactgggtgata
gagccggtggttggggacagactcactcaccagatccaggacctaacgctcgacaccacc
tactacttcaagatccaggcccgcaactccaagggcatgggcccgctgtccgagtttgtg
cagttccgtacgccgaaagcaccaggatctggcaaactcggcaaacacccgccatccatg
gacttgggcaccgacacgaggcactccatcggtggtcacaacagcccccacggcagcccc
acctccaccctggacagtaacatcatgctgatcatcatcatctctgtcggcgtcttcacc
atcatcatggtggtcatcatcgccttcatctgcacccgcaggaccaactaccagcagaag
aagaaacgagctgcttgtaaagctgccaatggatcccacaagtacaaaggcaactcgaag
gatgtgaagcccccagacctgtggatccatcacgaacgtctggagctgaagccgatcgac
aagtcccccgatcccaaccccgtcatgaccgacaccccccccattccccgcaattcccag
gacatcagccccgcggacaacgtggacaaagaccacacgcgcaggaactcttacctgggc
cggggtcaggaagatggcgtctcatctatgagcagtcggcggggactgcgacccaagatc
atgatgcccttcgatgctcagcctccacagcctgtgattagtgcccatcccatccattca
ctcgacaaccctcatcatcatcaccactgtgacgggccttcctccccaacccgcagctac
ctccgccaccagatggccacccgcccactcgcctcttcattagacagggccaattccaca
gaatcagtacggaacaccccgaacagcgacatgtcaccggcactgagctcacagactcac
accgtggacagcctggagacagacgtgccaagcgtcacctacctgcccggctcacaggac
gaggactctaaccgcagcgtccccactgcccacgtccgcccctcacaccctctcaagagc
tttgcggtcatcgccatccctccggccagcaccggctacgaggcagcctcgtccagcaca
ccactgttggcccaggcgggggccaatcctcaggttcattcagtgaagacggcatccata
ggcacattgggtcgtagccgatccccgatggctgtcaccgtgcccagtgccccagatgtg
gctgaatctgccaagatgctggaagactccgacactaactacagcccagatgagctgaat
gaagaaatggcgcacctcacgggcttaatgaaggacctcaacgttatcaccacagcatag
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