Leucoraja erinaceus (little skate): 129713642
Help
Entry
129713642 CDS
T09122
Name
(RefSeq) E3 ubiquitin-protein ligase arih1 isoform X1
KO
K11968
ariadne-1 [EC:
2.3.2.31
]
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
129713642
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
leri04121
]
129713642
Enzymes [BR:
leri01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
129713642
Ubiquitin system [BR:
leri04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
129713642
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBR
UBA_ARI1
IBR_1
IBR_2
Ariadne
zf-C3HC4_2
zf-C3HC4_4
zf-C3HC4
zf-RING_14
RING_XB3-XBAT31
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
129713642
NCBI-ProteinID:
XP_055518820
LinkDB
All DBs
Position
36:complement(521089..571358)
Genome browser
AA seq
557 aa
AA seq
DB search
MDSDEGYMYDEDEYSEESEPEDNFEIGEVEMQEPGLEPGQDGDGVGGGGGGGLGGLGGLG
GLGAEQEEEDYRYEVLSAEQIVQHMVECIREVNEVIENPATITRILLSHFNWDKEKLMER
YFDGNLEKLFAECHVVNPYRKSRTRQMNTRSSSQDMVCAICYLNYPNSKEESGGSGSSTR
INNSVSDGQYFTGLECGHKFCMQCWNEYLTTKIIEEGMGQTISCPAHGCDILVDDNTVMR
LITDSKVKLKYQHLITNSFVECNRLLKWCPAPDCHHVIKVQYPDAKPVRCKCGRQFCFNC
AENWHDPVKCKWLKKWIKKCDDDSETSNWIAANTKECPKCHVTIEKDGGCNHMVCRNQNC
KAEFCWVCLGPWEPHGSAWYNCNRYNEDDAKAARDAQEVKGARMWRSRAALQRYLFYCNR
YMNHMQSLRFEHKLYAQVKQKMEEMQQHNMSWIEVQFLKKAVDVLCQCRATLMYTYVFAF
YLRKNNQSIIFENNQADLENATEVLSGYLERDISQDSLQDIKQKVQDKYRYCESRRKVLL
QHVHEGYEKDLWEYIED
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggactcggacgagggctacatgtatgacgaggacgagtacagcgaggagagcgagccc
gaggacaacttcgagatcggcgaggtggagatgcaggagcccggcctggagcccgggcag
gacggcgacggggttggcggtggcggcggcggcggcctgggaggcctgggcgggctggga
ggcctgggggccgagcaggaagaagaggattaccgctatgaggtgctgagcgccgagcag
attgtccagcacatggtggagtgcattcgggaggtcaacgaggtcatcgagaatccagct
actatcacaaggatacttctcagtcacttcaactgggataaggagaagctaatggaaagg
tattttgatgggaacctggagaaactttttgcagagtgtcatgtagttaacccttataga
aaatcccgaacacgtcagatgaacacaagatcatcctcacaagacatggtttgtgcgatc
tgctacctgaattatcctaactcgaaagaagaaagtggggggtctggaagcagcactagg
atcaataactcggtatcagatggccagtatttcacaggcttggagtgtggacacaaattc
tgtatgcagtgctggaatgaatacttaactacaaagatcatagaggaaggtatggggcag
accatatcctgcccagctcatggctgtgatatcctagttgatgacaacacagttatgcgt
ttgatcacagattccaaagtcaagttgaagtaccagcatttaataactaacagttttgta
gagtgcaatcgattgttaaaatggtgtcctgcccctgactgtcaccatgttattaaagtt
caatatcctgatgcaaagccagttcgttgtaaatgtggacggcagttctgcttcaactgt
gctgagaattggcatgatcctgttaaatgcaagtggttgaagaaatggattaagaagtgt
gatgatgacagtgaaacctccaattggattgcagcaaataccaaggaatgcccaaaatgt
cacgtgaccattgaaaaggacggtggatgtaatcacatggtttgtcgcaaccagaattgt
aaagcagaattctgttgggtctgccttggtccctgggagccgcatggatcagcttggtat
aactgcaatcgttataatgaagatgatgcaaaggcggcaagggatgcccaggaggtaaaa
ggagcacggatgtggcgttcacgagcggctctccagcgatacctcttctactgcaaccgc
tacatgaatcacatgcaaagtctgcgatttgagcacaagctctatgctcaagtcaagcag
aagatggaagagatgcaacaacacaacatgtcttggattgaggtgcaattcctgaagaaa
gctgtggatgtcctctgccagtgccgcgccacactaatgtacacttacgtctttgctttc
tacctcagaaagaacaaccagtccattatctttgagaacaatcaggcagacttggagaat
gcaacagaagtgctgtctggctatctggagagggacatatcccaggactccttgcaggac
atcaaacaaaaagtgcaagacaagtacagatactgtgagagccggaggaaggtgttacta
cagcacgtgcatgaaggctatgagaaagacctctgggagtacatcgaggactga
DBGET
integrated database retrieval system
