Leucoraja erinaceus (little skate): 129713825
Help
Entry
129713825 CDS
T09122
Name
(RefSeq) CCR4-NOT transcription complex subunit 3-like isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129713825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
leri03019
]
129713825
Messenger RNA biogenesis [BR:
leri03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
129713825
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
129713825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
129713825
NCBI-ProteinID:
XP_055519119
LinkDB
All DBs
Position
37:complement(5596692..5690913)
Genome browser
AA seq
753 aa
AA seq
DB search
MHNHLRLRINGLSPQFLRPRRGGVSSALEHGFKALTDRSVMADKRKLQGEIDRCLKKVSE
GVETFEDIWQKVHSAANANQKEKYEADLKKEIKKLQRLRDQIKTWVASNEIKDKRQLQEN
RKLIETQMERFKIVERETKTKAYSKEGLGSATKVDPAQKEKEEICQWLTNTIDSLNMQVD
LFESEMETLSAVTRKKKGEKEKQDRLEELKHYIERHRYHIKMLETLLRMLDNSTIEVDQI
KKIKDDVEYYVDSSQDPDFKENEFLYDDLDLEDIAQTSIMATSPASNSNSNVEDELFNQC
NSTPTSTTSSSPVPLSPANQSVENHEDERKRSRSDSEMSMSPAKVLSSKTHHSNNLPPSI
SISQSVQGSITTKTPTLPSNGSSNGGNKLLQTSKSYTLTQGTNSVSAYAAAVAAGTTTIN
TTSSFQSRPANAVPIPTSKQQNGTASYSAVVAENSVEHQNSYSLPSSTNSQPSGTTPIQN
NVKESVSVSVAITTSIIPVLAASQVNTQASNFSDLKPTPAMMNGPLPFVSQELKQAPETL
SSLKSMAERAAVSAGLEEQVQSLHLNERVLLSTPSSQSNSMTSTVPQTTEVHLQPMLGVC
PLSPVHLSKDQEYQLHMVESAWLHMPHPSDSERIRHYLPRNPCPTPPYHHQIPPVHSDTL
EFYQRLSTETLFFIFYYLEGTKSQYLAAKALKKQSWRFHTKYMMWFQRHEEPKTITDEYE
QGTYIYFDYEKWGQRKKEGFTFEYRYLEDRDLQ
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgcacaaccatctgagacttagaattaatggactgagcccacaattcttgaggccgaga
agaggtggtgtgagcagcgcactggagcatggttttaaggcactgactgatcgttcagtc
atggctgataagaggaaattacaaggagaaattgatcgctgtctgaagaaagtcagtgag
ggtgtggaaaccttcgaagatatctggcaaaaggttcacagcgcagcaaatgcaaatcag
aaggaaaaatatgaagctgacctgaagaaggaaattaagaaactacagaggttgcgagac
caaataaagacatgggtggcctccaacgaaattaaagacaagaggcagctgcaagaaaac
aggaaactaattgagacgcaaatggaaaggttcaagatagtggagagagaaacaaagacc
aaagcctattctaaagaagggctgggatcggcgacaaaggtggatccagcacagaaggag
aaggaagaaatctgtcagtggttaacgaatacgatagactctttaaatatgcaggttgat
ctctttgaaagtgaaatggaaacattgtcagcggtgacaaggaaaaaaaagggtgagaaa
gagaaacaggacaggctagaagaattgaagcattacatcgagagacacaggtaccacata
aaaatgctggaaactctcctgcgcatgttagacaacagcacaatagaagtggaccagatt
aagaagatcaaagatgacgttgaatactatgttgattcctctcaggacccagactttaag
gaaaatgagtttttatacgatgatcttgatcttgaggacatagcacaaacatcaatcatg
gcaacatcaccagcaagcaacagtaacagcaatgtggaagatgaactttttaaccagtgc
aacagtactcccacctctacaacctcaagttctcctgtacccctcagtccagccaaccag
tccgtggaaaatcatgaagatgaaaggaagcggagtaggtcggacagcgaaatgagcatg
tcccctgcaaaagttcttagcagcaagacgcatcatagtaacaacctccctccgtccatt
tctatttctcagagtgtgcaggggtcaatcaccacaaaaacgccgaccctgccctcgaat
ggatccagcaacgggggaaacaaactgctacaaaccagcaaaagctacactctgacgcaa
gggacgaactcagtttctgcctatgcagctgctgtggcagcgggaaccaccacaatcaac
accaccagctcattccagtcaagacctgccaatgcggtgcccattcccaccagcaagcag
caaaatgggactgcaagttacagtgctgttgtcgctgagaacagtgtggaacatcaaaat
agctacagtcttccctccagtacaaacagtcagccgagtggcaccacacccatccagaat
aatgtgaaagagtcggtcagcgtgtctgtagctatcacgacaagcatcatccctgtactg
gcagccagtcaggtcaacacacaagcctccaacttttctgatcttaaaccaacaccagcc
atgatgaatggacccttgccgtttgtctcgcaggagctgaagcaggctccagagacactc
agctctttaaaaagtatggcagaacgagcagctgtgagtgcaggattggaagagcaagtc
cagtctttgcatttgaacgagagggttctcctcagcaccccatcatcgcagagcaactcg
atgacatctactgttccgcaaacaacagaggttcatcttcagccgatgctgggtgtgtgc
ccactcagcccagtgcatctatccaaggaccaagaataccagctgcacatggtggaatca
gcgtggctacacatgcctcacccgtcggactctgagagaatacgacactacctccctcgt
aatccatgtcccacgccgccttatcaccatcagatacccccagtccattcggacacactg
gagttctaccaacgattgtccacagaaacactcttctttattttctactacctagagggg
accaagtcccagtatttggctgctaaagctttgaagaaacagtcctggaggttccacacc
aagtacatgatgtggtttcagagacacgaagagccaaaaacaatcacagacgaatatgaa
cagggaacatacatttactttgactatgagaaatggggccagagaaagaaggaaggcttc
acattcgaatacagatacttggaggacagggacctgcagtaa
DBGET
integrated database retrieval system
