Leucoraja erinaceus (little skate): 129713833
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Entry
129713833 CDS
T09122
Name
(RefSeq) zinc finger and BTB domain-containing protein 20-like isoform X1
KO
K10501
zinc finger and BTB domain-containing protein 20
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
leri03000
]
129713833
04121 Ubiquitin system [BR:
leri04121
]
129713833
Transcription factors [BR:
leri03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
129713833
Ubiquitin system [BR:
leri04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
129713833
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTB
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-C2H2_6
zf-C2H2_jaz
zf-C2H2_15
BTB_KLHL33
zf-met
zf-Di19
zf-C2H2_2
zf-Vps39_C
B129_C2H2-zf
zf-UBP
DUF5810
Zf-C2H2_ZNF451
DUF2225
Zf-C2H2_ZNF451_2nd
BolA
zf-LYAR
zf-C2H2_16
Zf-C2H2_ZNF451_1st
Motif
Other DBs
NCBI-GeneID:
129713833
NCBI-ProteinID:
XP_055519138
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All DBs
Position
37:6002083..6010822
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AA seq
673 aa
AA seq
DB search
MTHRSDRPAPPRGVVDAERRREGDRRRRRRRRRHRDLHIPHTSDVRLARAARRGVAPVHR
GRKRRLTCAVKQSRMAEQLHSINLQNFSRSLLETLNSQRLGGHFCDVTVRIHNTALRAHR
CVLAAASPFFHDKLLLGYSEIEVPPLVSAQTLRRLVDFMYSGSLMVSHVEALQILTAASV
LQIKTIIDECTRIISQNALQKAQGDQQKMDLSDEKEAVLCQNTGDQIHKFPMGFIETALS
PHTAEREFDFVQGGSKNTATGDGGYKAEEMVPILCRQQTLARQKGVGEQAITDQENLTLM
ETGRNNEVRGIWYNTAANQRPEMGLLSQGSHSRKQRQPIRLQMADGSQVTIKEEDDDLLY
CGESIAVRTVSNQIAQQSNQDEQTEEITEANAFNPNQSAMEDRRDSAGHLSLSSKGDEME
FFNASDLLPEELKSFWQGEKEEKDTAVQQNRKADCKSQLDASFPRPSTFMQDFLPGSTMQ
SNLRNQGCSAQYDVEEDPTGAGATTHRSLYQMGLPQSHHLPPLASTSQTCVSSIPAQPSC
QNAPLFPDGSQAVPANPGDAERKPYGCTQCGKTFSSRQNYAKHMFVHTGEKPHQCSVCWR
SFSLRDYLIKHMVTHTGVRAYQCPVCNKRFTQKSSLNVHMRLHRGEKAFECHVCNKRFSH
KTLLERHMATHVV
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgacgcacaggtccgaccgacccgcccccccccgaggggttgtcgatgccgagaggaga
cgagagggtgatcggcgccggcggcggcggcggcggcggcaccgggacctccacatcccc
cacacgtctgacgtgaggcttgcgagggccgcccgcagaggtgtagcgccggttcaccgc
gggagaaagcggaggttgacttgtgcagtgaaacagagcagaatggctgagcaacttcat
agcatcaacctccagaatttcagcaggtcccttctggagacgctgaactcgcagcgcctg
ggtggtcatttctgcgatgtaaccgtacgtatccataacacagctctccgagcccaccgc
tgtgtcttggctgcagctagcccctttttccacgataaactcttgttgggctacagcgag
attgaggtcccacctctggtctcagcccagactctgcgacgactagtggattttatgtat
agtggctcactgatggtctctcatgtggaggctttgcagatcctcacggcagcgagtgtc
cttcagattaaaaccataatcgacgagtgcacacggatcatttcacaaaatgccctacaa
aaggctcagggggaccaacaaaagatggacctctccgatgagaaggaagcagttctttgc
cagaacactggcgaccagatccacaagtttcccatgggttttattgaaacagcattgtca
ccccacactgctgagagagagtttgactttgtacagggaggttcaaagaacacagccaca
ggtgatggtgggtacaaggcagaagaaatggtccccattctgtgcaggcaacaaacatta
gcacgtcagaagggagttggagagcaggccataaccgaccaggagaacctgactctaatg
gagactggccgcaataatgaggtgcgtggaatctggtacaatactgcagccaaccagcgg
cccgagatggggcttttgtcacagggcagtcacagccgcaagcaacggcagccaatcaga
cttcaaatggctgacggaagtcaagtgaccatcaaagaagaagacgatgatctcctttac
tgtggggagagcatcgctgtccgaaccgtctccaaccaaatcgcacagcaaagcaaccaa
gatgaacagaccgaggaaatcactgaggcgaatgcgtttaaccccaaccagagtgcaatg
gaggaccgacgagactctgctggtcatctgagtttgagcagcaaaggagatgagatggaa
tttttcaatgccagtgatctcttaccagaagaactgaagtccttttggcaaggagagaag
gaggagaaggacactgccgtacagcaaaatcgcaaagcggactgcaagtcgcagcttgat
gcttcttttccgcggccttcaacattcatgcaagactttctcccaggatcgaccatgcaa
tccaacctacgtaaccagggctgttctgcacaatatgatgttgaagaagaccccactgga
gccggcgcaactactcaccgcagcctttaccaaatgggccttcctcagtcccatcatctc
ccaccattggcctccacctctcagacgtgtgtgtccagcattccggcacagccctcgtgc
cagaatgccccgttattcccagatggaagccaggcagttccagcgaatcccggtgatgcc
gaaaggaaaccctacggatgcacgcagtgtgggaaaaccttcagctccagacagaactat
gccaagcacatgtttgtccacaccggtgagaagcctcatcagtgcagcgtgtgctggcgt
tcgttctcgctcagggactacttgataaagcacatggtgacgcacacaggcgtgcgagcg
taccagtgtcctgtgtgcaataaacgctttacccaaaagagctcccttaacgtgcacatg
cggctccaccgtggcgagaaggccttcgagtgccacgtgtgtaacaagcgattctcgcac
aagactctgctggagaggcatatggccacacacgtcgtataa
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