Leucoraja erinaceus (little skate): 129713890
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Entry
129713890 CDS
T09122
Symbol
ift56
Name
(RefSeq) intraflagellar transport protein 56 isoform X1
KO
K19685
intraflagellar transport protein 56
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
leri03037
]
129713890 (ift56)
Cilium and associated proteins [BR:
leri03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
129713890 (ift56)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
ANAPC3
TPR_14
TPR_2
TPR_16
TPR_1
TPR_6
TPR_8
TPR_9
TPR_Slam
ARM_TT21_N
Fis1_TPR_C
SRP_TPR_like
TTC7_N
Motif
Other DBs
NCBI-GeneID:
129713890
NCBI-ProteinID:
XP_055519230
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All DBs
Position
37:7946084..7977968
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AA seq
575 aa
AA seq
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MMLSRAKPAVTGETLQMDKKKKKGKKIPKLEEYLTNRDYSGALTLLEFKRHVGEKEDDID
LWMGYCAFHLGDYRRAMEEYEALTKSEDIHPDVWVNLACTFFYLGMYKEAEEAATKAPKS
RLQNRLLFHLAHKFSDEKRLMNYHQNLQDITEDQLSLASIHYMRSHYQEAIDIYKRILLD
NREFMALNVYVALCYYKLDYYDVSQEVLAVYLQHYPDSTIALNLKACNHFRLYNGKAAEA
ELKNLMDIGSPVFDFAKELIKHNLVVFRGGEGALQVLPPLIDVIPEARLNLVIYYLRQDD
VQEAYNLIKDLEPTTPQEEPSLFNLSSEDNSSIPGTHLEYILKGVVNAALGQEQGSREHL
KIAQQYFQLVGGSASECDTIPGRQCMASCFFLLKQFEDVLIYLNSVKSYFYNDDLFNFNY
AQAKAAVGNFKEAEEVFQLIQNEKLKNDYIYLSWLARCYIMNKKPRLAWELYLKMETSGE
SFSLLQLLANDCYKMGQFYYAAKAFDVLERLDPNPEYWEGKRGACVGIFQMILAGREPKE
TMREVLHLLRNTGNPQVEYIIRTLKKWAKDNRVAI
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgatgctctcacgagcaaaaccggctgtcaccggagagacgctgcagatggataaaaag
aagaaaaaagggaaaaaaattccaaagcttgaggagtatcttacaaacagagactattct
ggtgctctaaccttactggagtttaagcggcatgtgggtgagaaggaggatgacattgac
ttgtggatgggatactgcgcattccacctaggagattataggagggctatggaggaatat
gaggctctgacaaagagtgaagacattcaccctgatgtttgggtgaatctggcatgtact
ttcttttacttgggaatgtataaggaagcagaggaagctgcaacgaaagctcctaagagt
cgactgcagaatcgcctgttgtttcacctggctcacaagttcagtgatgagaagagattg
atgaactaccaccagaatctgcaggacatcactgaggatcagctcagtttggcttcaatc
cactatatgcgctcccattaccaggaggccattgatatctacaagcgtatcctgctcgat
aaccgggaatttatggccttgaatgtgtatgtggcactgtgctactataagctggattac
tacgacgtctcccaggaagttctggcagtttatctgcaacattatcccgacagcaccatt
gcgttgaacctgaaagcctgcaaccacttccgactctacaatggaaaggcagcagaggca
gaactgaaaaatctaatggacattggttcccctgtgtttgattttgcgaaagagctcata
aagcacaacctggtggtgttccggggtggagagggtgccttgcaagtgctcccgcctctt
attgatgtcattcctgaagccaggctcaacctagtcatttattacctgcgacaagatgac
gtgcaagaggcttataatcttattaaggacctggagccaacaacgccacaggaggagcca
agcctgtttaatctttcttctgaggacaattcctccatcccagggactcatctggaatat
attttgaaaggtgtggtgaatgcagcactgggacaggaacagggctcgagggagcacctg
aagattgcacaacagtattttcagctggttggaggatctgccagtgaatgtgatactatc
cctgggcggcaatgtatggcttcctgttttttcttgctgaaacaatttgaggatgtttta
atctacctcaactctgtcaagagttacttctacaatgatgacctcttcaacttcaactat
gcacaggcgaaagcagccgttggcaatttcaaggaagctgaggaagtgtttcaactgatt
cagaacgagaagctgaagaacgactacatttacctcagctggctggcccgttgctatatc
atgaacaagaaaccacgcctggcatgggagctctacttgaagatggagacctctggagag
tctttcagcctcctacaactcttggctaatgactgctacaagatgggacagttctactat
gctgcaaaagcttttgatgttcttgagcgcctggatccaaatccggaatattgggaggga
aagcgtggagcttgtgttggtatcttccaaatgatccttgcaggccgtgaaccaaaggag
accatgcgggaagttctccatctccttcgaaatactgggaatcctcaggtggaatacata
atccgcaccctaaagaaatgggccaaagacaaccgagtggctatctaa
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