Leucoraja erinaceus (little skate): 129714041
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Entry
129714041 CDS
T09122
Name
(RefSeq) LOW QUALITY PROTEIN: latent-transforming growth factor beta-binding protein 4-like
KO
K08023
latent transforming growth factor beta binding protein 2/3/4
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
leri04990
]
129714041
Domain-containing proteins not elsewhere classified [BR:
leri04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
129714041
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF_3
hEGF
FXa_inhibition
EGF
Plasmod_Pvs28
EGF_Teneurin
EGF_2
EGF_MSP1_1
Motif
Other DBs
NCBI-GeneID:
129714041
NCBI-ProteinID:
XP_055519474
LinkDB
All DBs
Position
38:1053458..1097276
Genome browser
AA seq
1441 aa
AA seq
DB search
MDCRLFLALWCSALVQLSTAQLGEVKILFTPRLCKLHCEAGRCITHCVTGNLTTVYSHSG
PTDTERAGYRAFLCPVRCQNGGVCVRRDHCRCPPGFTGRLCHIATDSTNNQVLSSLPTKR
PGSAPNGRIQSIYTLPLSNQRRQAQSQQVPSIVDLRVNHPPEVQVKVHQVAQVDGGRNSF
SAQQDTARGGTFQRDPQDEATQEQLRPLASTPPSGGDYPFGYCFTEITNGQCATPLTGLR
TRDHCCRGGGAGWGVSECTVCPHSPENDCPRGFQKMADGECQDIDECGLPRICQDGKCVN
IKGSYRCTCNAGFVQDTSKSRCISHQVISLTRGPCYRIYRGGSCSLPVVQNITKQICCCS
RVGKAWGPSCQRCPAAGTGAFREVCPAGPGYHYTRSDLRLPNRGTGSLGQHRPRVERVRP
STTLAPIVQHTAAPRLREMATVARIPATTTVPPYTTRPAPELHICLRVPHVCGPGHCVAR
QRSHTCVCNIGFQLNAERSRCVDADECGQQPALCPNARCENSVGSYRCVCSRGFASNSHG
TDCIDTDECSDESTCPNSECVNTIGSFHCLPCPAGYQVHHRKCADVDECXAGGAACGAAG
VCVNTEGSYQCSCHHGYRLSVDGKQCADINECFEGDFCAPYGECLNSPGSYTCLCAEGFT
TSADLSTCLDVNECTTTSLCTKGRCTNTVGSFECSCEPGFAVDADQSQCVDRDECVEYPS
ICGSKRCENSPGSFQCITECGVGFQLSPDQECSDRDECVEYPSICGSKRCENSPGSFQCI
TECGVGFQLSPDQECSDIDECTNATICGTNAYCQNVAGSFRCHCDRHYRIAPDGSACVDR
DECVEYPSICGSKRCENSPGPTDIDECTNATICGTNAYCQNVAGSFRCHCDRHYRIAPDG
SGCVDRDECVEYPSICGSKRCENSPGSFQCITECGVGFQLSPDQECSDIDECTDSTICGA
NTYCQNVAGSFRCVCDQGYGTVPDGPGCVDVNECELMEAVCGSAACENVPGSFFCICPGD
KEEFEPLTGRCVGQERHAETATRDQTECYYNLNDVQRCQNVLSSNVSMQACCCTVGEGWG
RECNINPCPAYDSDDYQSLCPGGRGLLTVPHPTFGRGYIDADECSLFGSEVCKDGVCVNT
VPGYSCYCPAGHYYHSVLLHCIADVHMALCWQEVDFMFLCRRPLLERQTTYTECCCQYGE
AWGIECALCPLRDTDEHAALCYMRGGVEDEDSYPYPLGYEPYGAAPRPELPLDPRDYGGF
GPVEPPPFLVAEPRRSRSDHGSSRPRLRPRPWSAPAGHSSRTVRYSLAGQPLPDTPHPRP
LPDSRLQPRRNSGRHDRRSRLPAVRADECGVLSGCENGRCIRVPAGFTCDCDPGYTLHIA
RMTCVDIDECDEAEDGSTRCINGRCVNTGGSYRCTCPQGYVLSQPAHHCTPAQSRVTAAG
L
NT seq
4326 nt
NT seq
+upstream
nt +downstream
nt
atggattgtaggctgttcctggcactgtggtgcagtgctctagtgcagctatcgacggct
cagctgggggaggtgaagattctctttactcccaggctgtgtaaactgcactgtgaggct
ggccgctgcatcacccactgtgtaactggtaacctgaccaccgtctacagccactctggc
cccacggacaccgagagagcgggctaccgagcgtttctctgcccagtgagatgccagaat
ggtggggtgtgcgtgcgccgagaccattgtcgctgcccgcccggcttcacggggagactg
tgccacatcgccaccgattcgaccaacaaccaagtcctcagcagcctcccaaccaagagg
ccaggctcagcgcccaatggcaggatacaaagcatctacactctgcctctgtctaaccag
cgacggcaagcacaaagtcaacaggtgccatcgattgttgatctacgggtcaaccaccca
cctgaggtgcaggtgaaggtgcatcaggtcgcgcaggtggatggaggaaggaacagcttc
tcagctcagcaagacactgcacgaggggggactttccagagggatcctcaagatgaggca
acgcaagaacaactgagaccgctcgcctccactcccccatcgggcggtgactatcccttt
ggttattgcttcactgagatcacaaacggacagtgtgccacaccattgaccggtctccgc
accagggaccactgctgtcgaggagggggcgcgggctggggagtgtcggagtgcaccgtg
tgtccacattctccagaaaatgactgcccgagaggattccagaaaatggcagatggcgaa
tgtcaagacatcgacgagtgtggcttgccaaggatctgccaggacggcaagtgtgtgaac
ataaagggcagttatagatgtacctgtaacgctggctttgtgcaagacacctcaaagagt
cgctgcatctcgcaccaggtgatatcgttgaccagagggccgtgttaccgcatctacagg
ggcggttcctgctctctgcccgtggtccagaacatcaccaagcagatctgctgctgtagt
cgtgtgggcaaggcctggggtccgagctgccaaagatgcccggcggctggcacaggtgca
ttcagggaagtttgcccagctggccccggctaccactacaccaggtctgatctccgactc
cccaaccggggcaccgggagcctcggccaacaccggccgcgggtggagagagtgcgcccc
agcaccaccctggcaccgatcgttcaacacacagcggctcccaggttgcgggagatggca
actgtggccaggattccagccaccaccactgtcccaccttacaccacacgtccagcacct
gagctacacatctgcctgcgcgtgccacacgtgtgtggaccgggacactgcgtggcacgg
cagcggagccacacgtgtgtgtgtaacattgggttccagctcaatgcagagcggtcgcgg
tgtgtggatgcggatgaatgtggacaacagcctgcgctctgccccaacgcgcggtgtgag
aacagcgttgggagttaccgctgtgtgtgttcccgaggtttcgcctccaattcccacggc
acagattgtatcgatacggatgagtgttcggatgaatccacctgccccaactcggagtgt
gtgaacaccattggctccttccactgcctaccctgcccagctggctatcaggttcaccac
cgcaagtgtgcagacgtggacgagtgtngtgcggggggtgcggcgtgtggagctgcgggt
gtgtgcgtcaacaccgagggatcgtaccagtgcagctgtcaccacggataccggctcagt
gtcgacggcaaacagtgtgcagatatcaacgagtgttttgagggtgatttctgtgccccg
tatggagagtgtttgaacagcccaggttcctacacctgcctttgtgctgaaggatttacc
acctctgccgatctctccacttgcttggatgttaatgagtgtaccacgactagcctctgc
accaagggccgctgcacaaacaccgttggctccttcgaatgctcctgtgagcctggattc
gcagtagatgctgatcagtcgcagtgtgtggatcgtgacgagtgtgtggaatatcccagt
atctgcggctccaaacggtgtgagaacagccctggatccttccagtgtatcacggagtgt
ggtgtgggattccagctcagcccagaccaggaatgtagcgatcgtgacgagtgtgtggaa
tatcccagtatctgtggctccaaacggtgtgagaacagccctggatccttccagtgcatc
acagagtgtggtgtgggattccagctcagcccagaccaggaatgtagcgatatagatgaa
tgcaccaacgccaccatctgtggaacgaacgcctactgccagaacgtggcgggatcgttt
cggtgtcactgcgaccgacattaccggatcgctccagacggctccgcgtgtgtggatcgt
gacgagtgtgtggaatatcccagtatctgtggctccaaacggtgtgagaacagccctgga
cccacagatatagatgaatgcaccaacgccaccatctgtggaacgaacgcctactgccag
aacgtggcgggatcgtttcggtgtcactgcgaccgacattaccggatcgctccagacggc
tccgggtgtgtggatcgtgacgagtgtgtggaatatcccagtatctgtggctccaaacgg
tgtgagaacagccctggatccttccagtgcatcacagagtgtggtgtgggattccagctc
agcccagaccaggaatgtagcgatatagatgaatgcaccgactccaccatctgtggagcc
aacacctactgccagaacgtggcgggatcgttccgatgtgtctgtgaccagggttacggg
acggtaccagacggcccgggctgtgtggatgtgaatgagtgtgagctgatggaggcggtg
tgcggctcagcggcgtgtgagaatgtgcctggttcattcttctgtatctgcccgggcgac
aaggaagaatttgaaccgctcacggggcggtgtgtcggtcaggagaggcacgcagagaca
gccacgagggatcagactgaatgttactacaatctgaatgacgtgcagcggtgccagaac
gtcctgagcagcaacgtgtcgatgcaggcgtgctgttgtactgtgggagaaggatggggc
agggaatgcaacatcaacccctgtcctgcctacgactctgatgactatcagtcgctgtgc
ccaggggggagaggactgctcaccgttccccacccaacgttcggaagaggctacatagac
gctgatgaatgctcgctgttcggctcggaggtttgcaaggacggtgtgtgtgtgaacact
gtccctggatactcctgctactgcccggccggccattactatcactccgttctcctccac
tgcatcgcagatgtccacatggccctgtgttggcaggaggtggacttcatgttcctgtgc
agacggccgttgctggagcgacagaccacctacacggagtgttgctgtcagtacggagag
gcctggggcatagagtgtgccctctgccccctgcgggatacagatgagcacgctgcactg
tgctacatgagagggggtgtggaggacgaggactcctacccctaccccctgggctatgaa
ccttacggagcggcgccgcggcccgagttacccctggacccccgggactacgggggcttc
gggccggtggaaccgccgccgttcctggtcgctgagccgcggaggagccgcagtgaccac
ggctcgtcccggccacggctccggccacggccctggtcagcgcccgccggccacagctca
cggactgtccgctacagcctggccgggcagccgctcccggacaccccacacccccgccca
ctgccggacagccggctccagccccggagaaacagcgggcggcacgaccgccggtcacgg
ctccccgctgtgcgggcggatgagtgcggggttctgagcggctgcgagaacggtcgctgt
atccgagtccccgccggcttcacctgtgactgtgaccccggctacacactgcacatcgcc
aggatgacctgtgtcgacatagatgagtgtgatgaagcagaggacggcagcacgcggtgc
atcaacggcaggtgtgtgaacactggcggttcgtatcgatgcacctgcccacagggctat
gtcttgtcacagccagcccaccactgcacacctgcccagagtagagtcacagcagcaggc
ctgtga
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